Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_B23
         (839 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.2  
SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11)                  28   8.2  

>SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1409

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = -2

Query: 766 DXQWXXNGXRDXQKNIQYVXQRXGWDGSSSAVQRPXPWRGEARV 635
           D  +      + Q N++ V +   W+ S S +++  PW   A++
Sbjct: 736 DRSYTFTATNNAQSNVELVKKFDNWEYSDSGIEKRMPWISGAKL 779


>SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11)
          Length = 1417

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 730  QKNIQYVXQRXGWDGSSSAVQRPXPWRGEAR 638
            Q N++ + +   W  +  A+Q   PW G A+
Sbjct: 1181 QTNVKLINKLGDWKNNKDAIQNRMPWLGSAK 1211


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,477,752
Number of Sequences: 59808
Number of extensions: 159563
Number of successful extensions: 297
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)