Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_B14
(815 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 28 0.10
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 28 0.10
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 28 0.10
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 28 0.10
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 28 0.10
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 28 0.10
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 28 0.10
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 28 0.10
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 28 0.10
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 6.7
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 8.9
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 60 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 105
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 27.9 bits (59), Expect = 0.10
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 664 NTESTGIGSPDVLWPISLCPRMVPPLSWIP*CXPSFVAVLTAHLSV 801
+T STG+ SP L PR PPLS + + LT+ LSV
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSV 149
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.8 bits (44), Expect = 6.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3
Query: 348 TDGRFPPLW 322
T+GR PP+W
Sbjct: 216 TEGRLPPVW 224
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 122 YTQEGSYSRRSCGY 81
Y Q +Y SCGY
Sbjct: 338 YDQSSAYDASSCGY 351
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,083
Number of Sequences: 336
Number of extensions: 4533
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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