Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_A24
(1139 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 32 0.87
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.87
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.87
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.87
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 31 2.0
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.6
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 30 3.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.1
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 8.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 8.1
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 8.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 8.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 8.1
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 31.9 bits (69), Expect = 0.87
Identities = 22/97 (22%), Positives = 26/97 (26%)
Frame = +3
Query: 366 PKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXXT 545
PKP P P P +Q P P + PP P
Sbjct: 327 PKPAPQQAPPVQQNPPKPAVQQAQAPVVQQAPAPPVQQAPPKPTPQQA-PPVRQNPPMPA 385
Query: 546 XHNXPQXRXXKQXPPQKXNXNTPPXXXNKPXKTXXTA 656
P + Q PP+ PP N P T A
Sbjct: 386 VQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPA 422
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/65 (24%), Positives = 21/65 (32%)
Frame = +3
Query: 366 PKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXXT 545
P P PT P P P S PP ++ P +P +PP + P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 359
Query: 546 XHNXP 560
P
Sbjct: 360 PRGGP 364
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/65 (24%), Positives = 21/65 (32%)
Frame = +3
Query: 366 PKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXXT 545
P P PT P P P S PP ++ P +P +PP + P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 380
Query: 546 XHNXP 560
P
Sbjct: 381 PRGGP 385
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/65 (24%), Positives = 21/65 (32%)
Frame = +3
Query: 366 PKPXHXPXPTPXXPXPTHXXXXPXRXGXSXPPXXXXRQXXPSXNPXKXNPPXHTTPXXXT 545
P P PT P P P S PP ++ P +P +PP + P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 365
Query: 546 XHNXP 560
P
Sbjct: 366 PRGGP 370
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 362 TXKAXXPPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXP 478
T A P T + P PP PP + +P P P P
Sbjct: 621 TTDAPVDPVTEASPLNPQPPPPPSPSPEPEPEPKPPVTP 659
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +1
Query: 691 GXXKRXXQPATXXTTTKXXXXNXQTXXXTTXXPQTXTQXXPXXXTTNTPQXXT 849
G + P T TT + QT TT PQT T TT TPQ T
Sbjct: 347 GSIEELMSPPTTTTTLQTTTTRPQTTKTTTT-PQTTTTRPQTTKTTTTPQTTT 398
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 410 PNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
P PP PP +PTP P P KP P
Sbjct: 546 PTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +2
Query: 362 TXKAXXPPXTHXAXTT--PNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXPT 523
T +A P T TT P PP PP T T P A +P P PT
Sbjct: 315 TPRATTPLATTPLATTRAPLPPSPPPRTSKRPVTQAPTTPRATTTRRPTTTTPRPT 370
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP TP PP PP P P P P P P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 380 PPXTHXAXTTPNPPXPPXXTXXXKPTPXPXXXPAXXQXKPXQXKPXP 520
PP TP PP PP P P P P P P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 410 PNPPXPPXXTXXXKPTPXPXXXPAXXQXKP 499
P PP PP KPTP P P Q KP
Sbjct: 157 PPPPPPPVSVPSSKPTPPP---PPPAQQKP 183
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 410 PNPPXPPXXTXXXKPTPXPXXXPAXXQXKP 499
P PP PP KPTP P P Q KP
Sbjct: 157 PPPPPPPVSVPSSKPTPPP---PPPAQQKP 183
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -2
Query: 517 GGFXLXGFXLGXXWRXSWXGGXLXPXRXGWXXXWVGXGXXGVGXGXXXGFG 365
GG G+ G W GG R GW G G G G G G+G
Sbjct: 220 GGGGGGGYGSGGGWGGG--GGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYG 268
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +1
Query: 445 EXAXPPXXXXASXXPAXTPPXQTXPXTPHPXXPXXTTHPNXDXXNNXHHKXRTXTPPQ 618
E + PP +S P PP + P +P P + H + D + R PP+
Sbjct: 569 EESAPPAARQSSPSP---PPARRRPQSPSPERQRTSRHADRDITSYDEDSYRAVPPPR 623
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +1
Query: 445 EXAXPPXXXXASXXPAXTPPXQTXPXTPHPXXPXXTTHPNXDXXNNXHHKXRTXTPPQ 618
E + PP +S P PP + P +P P + H + D + R PP+
Sbjct: 519 EESAPPAARQSSPSP---PPARRRPQSPSPERQRTSRHADRDITSYDEDSYRAVPPPR 573
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +1
Query: 445 EXAXPPXXXXASXXPAXTPPXQTXPXTPHPXXPXXTTHPNXDXXNNXHHKXRTXTPPQ 618
E + PP +S P PP + P +P P + H + D + R PP+
Sbjct: 569 EESAPPAARQSSPSP---PPARRRPQSPSPERQRTSRHADRDITSYDEDSYRAVPPPR 623
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +1
Query: 445 EXAXPPXXXXASXXPAXTPPXQTXPXTPHPXXPXXTTHPNXDXXNNXHHKXRTXTPPQ 618
E + PP +S P PP + P +P P + H + D + R PP+
Sbjct: 569 EESAPPAARQSSPSP---PPARRRPQSPSPERQRTSRHADRDITSYDEDSYRAVPPPR 623
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.123 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,115,667
Number of Sequences: 27780
Number of extensions: 102898
Number of successful extensions: 514
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3088599568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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