Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A13
         (879 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8H2L8 Cluster: Pathogenesis-related genes transcriptio...    35   2.4  
UniRef50_Q6NMD9 Cluster: At1g02405; n=1; Arabidopsis thaliana|Re...    34   5.5  
UniRef50_A2YC93 Cluster: Putative uncharacterized protein; n=3; ...    34   5.5  
UniRef50_Q9VZC2 Cluster: CG15021-PA; n=1; Drosophila melanogaste...    33   7.2  

>UniRef50_Q8H2L8 Cluster: Pathogenesis-related genes transcriptional
           activator Pti6-like protein; n=3; Oryza sativa (japonica
           cultivar-group)|Rep: Pathogenesis-related genes
           transcriptional activator Pti6-like protein - Oryza
           sativa subsp. japonica (Rice)
          Length = 293

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 21/58 (36%), Positives = 24/58 (41%)
 Frame = -1

Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
           P  +P L   PLP    PLP      P PPP  P    + T     LPP   PP+  P
Sbjct: 176 PRKKPLLYPPPLPPKKKPLPP-----PSPPPQPPLPEKENT----PLPPLLLPPKKKP 224


>UniRef50_Q6NMD9 Cluster: At1g02405; n=1; Arabidopsis thaliana|Rep:
           At1g02405 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 134

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 18/50 (36%), Positives = 21/50 (42%)
 Frame = -1

Query: 861 PXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPP 712
           P LQ+ P P  S P P      P PPP  P    + +     LPP   PP
Sbjct: 43  PCLQNQPPPPPSPPPPSCT---PSPPPPSPPPPKKSSCPPSPLPPPPPPP 89


>UniRef50_A2YC93 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 304

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 17/50 (34%), Positives = 17/50 (34%)
 Frame = -1

Query: 852 QHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXS 703
           QH  LP    P P        PPP  P H           PP   PPQ S
Sbjct: 48  QHHALPHPPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKPPQGS 97


>UniRef50_Q9VZC2 Cluster: CG15021-PA; n=1; Drosophila
           melanogaster|Rep: CG15021-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 420

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 17/58 (29%), Positives = 22/58 (37%)
 Frame = -1

Query: 873 PXXQPXLQHXPLPEXSAPLPXXXXLXPEPPPXXPXHXXQXTLXXKXLPPXXXPPQXSP 700
           P   P  +  P P  SAP P      P+PP   P          + LPP    P+ +P
Sbjct: 146 PPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPRPTP 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,354,229
Number of Sequences: 1657284
Number of extensions: 7346437
Number of successful extensions: 22374
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20977
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)