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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

next from show/32735
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1 O_BomaASG10000_internal:A_BomaASG_c28045_g1_i2
161bp
PAS_domain-containing_serine/threonine-protein_kinase_[Bombyx_mori]
2 O_BomaASG10001_internal:A_BomaASG_c28047_g1_i1
218bp
PREDICTED:_uncharacterized_protein_LOC105389963_[Plutella_xylostella]
3 O_BomaASG10002_complete:A_BomaASG_c28049_g1_i1
350bp
collagen_alpha-2(VIII)_chain_[Bombyx_mori]
4 O_BomaASG10003_complete:A_BomaASG_c28049_g1_i1
222bp
5 O_BomaASG10004_complete:A_BomaASG_c28049_g1_i1
140bp
6 O_BomaASG10005_complete:A_BomaASG_c28049_g1_i1
104bp
7 O_BomaASG10006_complete:A_BomaASG_c28050_g1_i1
508bp
uncharacterized_protein_LOC101738872_[Bombyx_mori]
8 O_BomaASG10007_complete:A_BomaASG_c28054_g1_i1
424bp
prolactin_regulatory_binding-element_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0036498 P IRE1-mediated unfolded protein response
GO:0043547 P positive regulation of GTPase activity
GO:0048208 P COPII vesicle coating
9 O_BomaASG10008_complete:A_BomaASG_c28054_g1_i1
129bp
10 O_BomaASG10009_5prime_partial:A_BomaASG_c28055_g1_i5
134bp
11 O_BomaASG1000_internal:A_BomaASG_c6789_g1_i1
111bp
12 O_BomaASG10010_5prime_partial:A_BomaASG_c28055_g1_i5
104bp
dynamin_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001661 P conditioned taste aversion
GO:0001738 P morphogenesis of a polarized epithelium
GO:0003777 F microtubule motor activity
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007017 P microtubule-based process
GO:0007291 P sperm individualization
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0007612 P learning
GO:0007613 P memory
GO:0007614 P short-term memory
GO:0007637 P proboscis extension reflex
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008355 P olfactory learning
GO:0009408 P response to heat
GO:0016185 P synaptic vesicle budding from presynaptic endocytic zone membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030198 P extracellular matrix organization
GO:0030536 P larval feeding behavior
GO:0030707 P ovarian follicle cell development
GO:0030866 P cortical actin cytoskeleton organization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0034334 P adherens junction maintenance
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0036465 P synaptic vesicle recycling
GO:0040008 P regulation of growth
GO:0045202 C synapse
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046843 P dorsal appendage formation
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:0048499 P synaptic vesicle membrane organization
GO:0050803 P regulation of synapse structure or activity
GO:0060429 P epithelium development
GO:0070864 C sperm individualization complex
GO:0072583 P clathrin-dependent endocytosis
GO:0072659 P protein localization to plasma membrane
GO:0072686 C mitotic spindle
GO:0090148 P membrane fission
GO:0098793 C presynapse
GO:1903475 P mitotic actomyosin contractile ring assembly
13 O_BomaASG10011_internal:A_BomaASG_c28056_g1_i1
138bp
hikaru_genki_[Bombyx_mori]
14 O_BomaASG10012_internal:A_BomaASG_c28056_g1_i1
138bp
reverse_transcriptase_[Bombyx_mori]
15 O_BomaASG10013_internal:A_BomaASG_c28057_g1_i1
172bp
PREDICTED:_uncharacterized_protein_LOC105227464_[Bactrocera_dorsalis]
16 O_BomaASG10014_complete:A_BomaASG_c28059_g1_i1
109bp
17 O_BomaASG10015_3prime_partial:A_BomaASG_c28060_g1_i1
176bp
uncharacterized_protein_LOC101742335_[Bombyx_mori]
18 O_BomaASG10016_5prime_partial:A_BomaASG_c28060_g1_i1
133bp
19 O_BomaASG10017_3prime_partial:A_BomaASG_c28068_g1_i1
1160bp
protein_patched_[Bombyx_mori]
GO:0001746 P Bolwig's organ morphogenesis
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005929 C cilium
GO:0006508 P proteolysis
GO:0006898 P receptor-mediated endocytosis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007346 P regulation of mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008158 F hedgehog receptor activity
GO:0008406 P gonad development
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0030139 C endocytic vesicle
GO:0030228 F lipoprotein particle receptor activity
GO:0030707 P ovarian follicle cell development
GO:0035225 P determination of genital disc primordium
GO:0042078 P germ-line stem cell division
GO:0042306 P regulation of protein import into nucleus
GO:0042981 P regulation of apoptotic process
GO:0045169 C fusome
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0048099 P anterior/posterior lineage restriction, imaginal disc
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048103 P somatic stem cell division
GO:0048471 C perinuclear region of cytoplasm
GO:0048477 P oogenesis
GO:0055088 P lipid homeostasis
GO:2000274 P regulation of epithelial cell migration, open tracheal system
20 O_BomaASG10018_5prime_partial:A_BomaASG_c28068_g1_i1
256bp
hypothetical_protein_WN51_10889_[Melipona_quadrifasciata]
21 O_BomaASG10019_complete:A_BomaASG_c28068_g1_i1
156bp
22 O_BomaASG1001_5prime_partial:A_BomaASG_c6791_g1_i1
103bp
uncharacterized_protein_LOC110380119_[Helicoverpa_armigera]
23 O_BomaASG10020_complete:A_BomaASG_c28068_g1_i1
149bp
24 O_BomaASG10021_complete:A_BomaASG_c28069_g2_i1
334bp
retinol_dehydrogenase_11_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0008106 F alcohol dehydrogenase (NADP+) activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0055114 P obsolete oxidation-reduction process
25 O_BomaASG10022_3prime_partial:A_BomaASG_c28070_g1_i1
241bp
peroxisome_assembly_protein_12_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006513 P protein monoubiquitination
GO:0006625 P protein targeting to peroxisome
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016558 P protein import into peroxisome matrix
GO:0046872 F metal ion binding
GO:1990429 C peroxisomal importomer complex
26 O_BomaASG10023_3prime_partial:A_BomaASG_c28070_g1_i2
162bp
peroxisome_assembly_protein_12_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006513 P protein monoubiquitination
GO:0006625 P protein targeting to peroxisome
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016558 P protein import into peroxisome matrix
GO:0046872 F metal ion binding
GO:1990429 C peroxisomal importomer complex
27 O_BomaASG10024_5prime_partial:A_BomaASG_c28071_g1_i1
181bp
exosome_complex_exonuclease_RRP44_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043488 P regulation of mRNA stability
GO:0043547 P positive regulation of GTPase activity
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
28 O_BomaASG10025_complete:A_BomaASG_c28072_g1_i1
369bp
tetratricopeptide_repeat_protein_17_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
29 O_BomaASG10026_5prime_partial:A_BomaASG_c28073_g1_i1
265bp
uncharacterized_protein_LOC110376212_[Helicoverpa_armigera]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
30 O_BomaASG10027_complete:A_BomaASG_c28074_g1_i1
520bp
fatty-acid_amide_hydrolase_2_isoform_X3_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064 F fatty acid amide hydrolase activity
GO:0019369 P arachidonic acid metabolic process
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