SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/15605
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
31 O_TrvaMG10060_complete:A_TrvaMG_comp25713_c1_seq1
550bp
PREDICTED:_DEP_domain-containing_protein_5_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0032007 P negative regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0034198 P cellular response to amino acid starvation
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:1990130 C GATOR1 complex
32 O_TrvaMG10063_3prime_partial:A_TrvaMG_comp25713_c1_seq1
102bp
phosphoribosylamine--glycine_ligase_[Phycisphaerae_bacterium_SM23_33]
33 O_TrvaMG10064_complete:A_TrvaMG_comp25713_c1_seq2
529bp
PREDICTED:_DEP_domain-containing_protein_5_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0032007 P negative regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0034198 P cellular response to amino acid starvation
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:1990130 C GATOR1 complex
34 O_TrvaMG10067_complete:A_TrvaMG_comp25713_c1_seq3
453bp
PREDICTED:_DEP_domain-containing_protein_5_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0032007 P negative regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0034198 P cellular response to amino acid starvation
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:1990130 C GATOR1 complex
35 O_TrvaMG1006_5prime_partial:A_TrvaMG_comp12851_c0_seq1
270bp
PREDICTED:_hemolymph_protein_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
36 O_TrvaMG10070_internal:A_TrvaMG_comp25713_c2_seq1
522bp
PREDICTED:_DEP_domain-containing_protein_5_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0032007 P negative regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0034198 P cellular response to amino acid starvation
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:1990130 C GATOR1 complex
37 O_TrvaMG10071_5prime_partial:A_TrvaMG_comp25714_c0_seq1
133bp
4-nitrophenylphosphatase_[Bombyx_mori]
GO:0004674 F protein serine/threonine kinase activity
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0009507 C chloroplast
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
38 O_TrvaMG10072_5prime_partial:A_TrvaMG_comp25714_c0_seq2
321bp
4-nitrophenylphosphatase_[Bombyx_mori]
GO:0004674 F protein serine/threonine kinase activity
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0009507 C chloroplast
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
39 O_TrvaMG10074_5prime_partial:A_TrvaMG_comp25716_c0_seq2
194bp
Aprataxin_[Operophtera_brumata]
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0033699 F DNA 5'-adenosine monophosphate hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
40 O_TrvaMG10075_5prime_partial:A_TrvaMG_comp25718_c0_seq1
264bp
PREDICTED:_RNA-binding_protein_26_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0006397 P mRNA processing
GO:0010923 P negative regulation of phosphatase activity
GO:0046872 F metal ion binding
41 O_TrvaMG10076_internal:A_TrvaMG_comp25719_c1_seq1
618bp
hypothetical_protein_KGM_22569_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007446 P imaginal disc growth
GO:0008270 F zinc ion binding
GO:0010629 P negative regulation of gene expression
GO:0016568 P chromatin organization
GO:0031519 C PcG protein complex
GO:0035064 F methylated histone binding
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
42 O_TrvaMG10079_5prime_partial:A_TrvaMG_comp25721_c0_seq1
1000bp
PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
43 O_TrvaMG1007_3prime_partial:A_TrvaMG_comp12853_c0_seq1
359bp
PREDICTED:_phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
44 O_TrvaMG10082_internal:A_TrvaMG_comp25721_c1_seq1
859bp
PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
45 O_TrvaMG10083_complete:A_TrvaMG_comp25722_c0_seq1
207bp
PREDICTED:_uncharacterized_protein_LOC106116608_isoform_X2_[Papilio_xuthus]
46 O_TrvaMG10086_complete:A_TrvaMG_comp25722_c0_seq2
242bp
PREDICTED:_uncharacterized_protein_LOC106116608_isoform_X2_[Papilio_xuthus]
47 O_TrvaMG10089_5prime_partial:A_TrvaMG_comp25723_c0_seq1
1177bp
PREDICTED:_nodal_modulator_3_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
48 O_TrvaMG1008_complete:A_TrvaMG_comp12855_c0_seq1
450bp
PREDICTED:_serine_palmitoyltransferase_1-like_[Plutella_xylostella]
GO:0003824 F catalytic activity
GO:0004758 F serine C-palmitoyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006686 P sphingomyelin biosynthetic process
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017059 C serine C-palmitoyltransferase complex
GO:0030148 P sphingolipid biosynthetic process
GO:0030170 F pyridoxal phosphate binding
GO:0035339 C SPOTS complex
GO:0046511 P sphinganine biosynthetic process
GO:0046512 P sphingosine biosynthetic process
GO:0046513 P ceramide biosynthetic process
GO:1904504 P positive regulation of lipophagy
49 O_TrvaMG10092_5prime_partial:A_TrvaMG_comp25723_c0_seq2
1169bp
PREDICTED:_nodal_modulator_3_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
50 O_TrvaMG10095_internal:A_TrvaMG_comp25723_c0_seq3
909bp
PREDICTED:_nodal_modulator_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
51 O_TrvaMG10098_internal:A_TrvaMG_comp25723_c0_seq4
901bp
PREDICTED:_nodal_modulator_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
52 O_TrvaMG100_5prime_partial:A_TrvaMG_comp11258_c0_seq1
173bp
PREDICTED:_uncharacterized_protein_LOC105383942_[Plutella_xylostella]
53 O_TrvaMG10101_5prime_partial:A_TrvaMG_comp25724_c0_seq1
137bp
PREDICTED:_protein_lin-37_homolog_isoform_X3_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007049 P cell cycle
GO:0008150 P biological_process
GO:0017053 C transcription repressor complex
54 O_TrvaMG10102_complete:A_TrvaMG_comp25725_c0_seq1
692bp
PREDICTED:_glycogen_[starch]_synthase_[Papilio_xuthus]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
55 O_TrvaMG10103_complete:A_TrvaMG_comp25727_c0_seq1
1240bp
PREDICTED:_Niemann-Pick_C1_protein-like_[Papilio_polytes]
GO:0001618 F virus receptor activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0007628 P adult walking behavior
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015248 F sterol transporter activity
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016242 P negative regulation of macroautophagy
GO:0030301 P cholesterol transport
GO:0031579 P membrane raft organization
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042632 P cholesterol homeostasis
GO:0045121 C membrane raft
GO:0046686 P response to cadmium ion
GO:0046718 P viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0060548 P negative regulation of cell death
GO:0070062 C extracellular exosome
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0090150 P establishment of protein localization to membrane
GO:2000189 P cholesterol homeostasis
56 O_TrvaMG10106_internal:A_TrvaMG_comp25727_c0_seq2
1024bp
PREDICTED:_Niemann-Pick_C1_protein-like_[Papilio_polytes]
GO:0001618 F virus receptor activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0007628 P adult walking behavior
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015248 F sterol transporter activity
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016242 P negative regulation of macroautophagy
GO:0030301 P cholesterol transport
GO:0031579 P membrane raft organization
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042632 P cholesterol homeostasis
GO:0045121 C membrane raft
GO:0046686 P response to cadmium ion
GO:0046718 P viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0060548 P negative regulation of cell death
GO:0070062 C extracellular exosome
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0090150 P establishment of protein localization to membrane
GO:2000189 P cholesterol homeostasis
57 O_TrvaMG10108_3prime_partial:A_TrvaMG_comp25727_c0_seq3
136bp
PREDICTED:_Niemann-Pick_C1_protein-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005764 C lysosome
GO:0005770 C late endosome
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0008158 F hedgehog receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0040010 P positive regulation of growth rate
GO:0040024 P dauer larval development
GO:0042632 P cholesterol homeostasis
GO:0046662 P regulation of oviposition
58 O_TrvaMG10109_internal:A_TrvaMG_comp25730_c0_seq1
150bp
PREDICTED:_probable_RNA_helicase_armi,_partial_[Bombyx_mori]
59 O_TrvaMG1010_complete:A_TrvaMG_comp12857_c0_seq1
275bp
PREDICTED:_carbonyl_reductase_[NADPH]_1-like_[Amyelois_transitella]
GO:0000253 F 3-keto sterol reductase activity
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0042376 P phylloquinone catabolic process
GO:0050890 P cognition
GO:0055114 P obsolete oxidation-reduction process
GO:0070402 F NADPH binding
60 O_TrvaMG10110_5prime_partial:A_TrvaMG_comp25730_c1_seq1
260bp
PREDICTED:_probable_RNA_helicase_armi,_partial_[Bombyx_mori]
previous next from show/15605

- SilkBase 1999-2023 -