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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

A_BomaMG_comp100048_c0_seq1

1243bp

PREDICTED:_protein_KRI1_homolog_isoform_X2_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0008150	P	biological_process

FPKM:2.90 TPM:2.69

A_BomaMG_comp100062_c0_seq1

281bp

FPKM:1.67 TPM:1.54

A_BomaMG_comp100066_c0_seq1

640bp

PREDICTED:_WD_repeat-containing_protein_13-like,_partial_[Papilio_xuthus]

GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:1904691	P	negative regulation of type B pancreatic cell proliferation
GO:1990841	F	promoter-specific chromatin binding

FPKM:3.62 TPM:3.35

A_BomaMG_comp100073_c0_seq1

1433bp

PREDICTED:_TBC1_domain_family_member_13_[Amyelois_transitella]

GO:0005096	F	GTPase activator activity
GO:0005622	C	intracellular anatomical structure
GO:0006886	P	intracellular protein transport
GO:0012505	C	endomembrane system
GO:0017137	F	small GTPase binding
GO:0031338	P	regulation of vesicle fusion
GO:0090630	P	activation of GTPase activity
GO:1902017	P	regulation of cilium assembly

FPKM:2.35 TPM:2.18

A_BomaMG_comp1000_c0_seq1

202bp

FPKM:2.06 TPM:1.91

A_BomaMG_comp100111_c0_seq1

260bp

fimbrial_chaperone_protein_FimC_[Buttiauxella_agrestis]

FPKM:12.40 TPM:11.49

A_BomaMG_comp100156_c0_seq1

1044bp

FPKM:2.08 TPM:1.93

A_BomaMG_comp100182_c0_seq1

364bp

hypothetical_protein_GNI_014550_[Gregarina_niphandrodes]

FPKM:4.08 TPM:3.78

A_BomaMG_comp100197_c0_seq1

1140bp

PREDICTED:_focal_adhesion_kinase_1_[Bombyx_mori]

GO:0000165	P	MAPK cascade
GO:0000166	F	nucleotide binding
GO:0000226	P	microtubule cytoskeleton organization
GO:0001525	P	angiogenesis
GO:0001568	P	blood vessel development
GO:0001570	P	vasculogenesis
GO:0001725	C	stress fiber
GO:0001764	P	neuron migration
GO:0001890	P	placenta development
GO:0001932	P	regulation of protein phosphorylation
GO:0001934	P	positive regulation of protein phosphorylation
GO:0003007	P	heart morphogenesis
GO:0003779	F	actin binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0004715	F	non-membrane spanning protein tyrosine kinase activity
GO:0004871	F	obsolete signal transducer activity
GO:0005088	F	guanyl-nucleotide exchange factor activity
GO:0005102	F	signaling receptor binding
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005815	C	microtubule organizing center
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005886	C	plasma membrane
GO:0005925	C	focal adhesion
GO:0005938	C	cell cortex
GO:0006468	P	protein phosphorylation
GO:0006921	P	cellular component disassembly involved in execution phase of apoptosis
GO:0007172	P	signal complex assembly
GO:0007173	P	epidermal growth factor receptor signaling pathway
GO:0007179	P	transforming growth factor beta receptor signaling pathway
GO:0007229	P	integrin-mediated signaling pathway
GO:0007275	P	multicellular organism development
GO:0007411	P	axon guidance
GO:0008284	P	positive regulation of cell population proliferation
GO:0008360	P	regulation of cell shape
GO:0008432	F	JUN kinase binding
GO:0009790	P	embryo development
GO:0010594	P	regulation of endothelial cell migration
GO:0010632	P	regulation of epithelial cell migration
GO:0014068	P	positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020	C	membrane
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016324	C	apical plasma membrane
GO:0016740	F	transferase activity
GO:0018108	P	peptidyl-tyrosine phosphorylation
GO:0019901	F	protein kinase binding
GO:0021955	P	central nervous system neuron axonogenesis
GO:0022408	P	negative regulation of cell-cell adhesion
GO:0030010	P	establishment of cell polarity
GO:0030027	C	lamellipodium
GO:0030054	C	cell junction
GO:0030198	P	extracellular matrix organization
GO:0030335	P	positive regulation of cell migration
GO:0031234	C	extrinsic component of cytoplasmic side of plasma membrane
GO:0033628	P	regulation of cell adhesion mediated by integrin
GO:0038007	P	netrin-activated signaling pathway
GO:0038083	P	peptidyl-tyrosine autophosphorylation
GO:0038096	P	Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0040023	P	nuclear migration
GO:0042127	P	regulation of cell population proliferation
GO:0042169	F	SH2 domain binding
GO:0043066	P	negative regulation of apoptotic process
GO:0043087	P	regulation of GTPase activity
GO:0043542	P	endothelial cell migration
GO:0043547	P	positive regulation of GTPase activity
GO:0043552	P	positive regulation of phosphatidylinositol 3-kinase activity
GO:0045087	P	innate immune response
GO:0045667	P	regulation of osteoblast differentiation
GO:0045860	P	positive regulation of protein kinase activity
GO:0046621	P	negative regulation of organ growth
GO:0046777	P	protein autophosphorylation
GO:0048010	P	vascular endothelial growth factor receptor signaling pathway
GO:0048013	P	ephrin receptor signaling pathway
GO:0048870	P	cell motility
GO:0050771	P	negative regulation of axonogenesis
GO:0051493	P	regulation of cytoskeleton organization
GO:0051893	P	regulation of focal adhesion assembly
GO:0051897	P	positive regulation of protein kinase B signaling
GO:0051964	P	negative regulation of synapse assembly
GO:0060396	P	growth hormone receptor signaling pathway
GO:0071560	P	cellular response to transforming growth factor beta stimulus
GO:1900024	P	regulation of substrate adhesion-dependent cell spreading
GO:2000060	P	positive regulation of ubiquitin-dependent protein catabolic process
GO:2000811	P	negative regulation of anoikis

FPKM:2.93 TPM:2.71

A_BomaMG_comp10019_c0_seq1

269bp

sulfite_reductase_subunit_alpha_[Staphylococcus_aureus]

FPKM:1.13 TPM:1.04

A_BomaMG_comp1001_c0_seq1

292bp

PREDICTED:_uncharacterized_protein_LOC105841290_[Bombyx_mori]

FPKM:1.51 TPM:1.40

A_BomaMG_comp100261_c0_seq1

1155bp

FPKM:2.33 TPM:2.16

A_BomaMG_comp10029_c0_seq1

207bp

exchange_factor_for_Arf_6_ortholog,_isoform_G_[Drosophila_melanogaster]

FPKM:0.93 TPM:0.86

A_BomaMG_comp1002_c0_seq1

446bp

FPKM:0.64 TPM:0.59

A_BomaMG_comp100308_c0_seq1

1226bp

PREDICTED:_cytoskeleton-associated_protein_5_[Bombyx_mori]

GO:0000922	C	spindle pole
GO:0000930	C	gamma-tubulin complex
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005856	C	cytoskeleton
GO:0007049	P	cell cycle
GO:0007051	P	spindle organization
GO:0007067	P	mitotic cell cycle
GO:0008017	F	microtubule binding
GO:0015630	C	microtubule cytoskeleton
GO:0016020	C	membrane
GO:0030951	P	establishment or maintenance of microtubule cytoskeleton polarity
GO:0035371	C	microtubule plus-end
GO:0043021	F	ribonucleoprotein complex binding
GO:0043234	C	protein-containing complex
GO:0050658	P	RNA transport
GO:0051297	P	centrosome cycle
GO:0051301	P	cell division

FPKM:3.66 TPM:3.39

A_BomaMG_comp100329_c0_seq1

849bp

PREDICTED:_talin-1_[Bombyx_mori]

GO:0001726	C	ruffle
GO:0003779	F	actin binding
GO:0005200	F	structural constituent of cytoskeleton
GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005886	C	plasma membrane
GO:0005925	C	focal adhesion
GO:0007016	P	obsolete cytoskeletal anchoring at plasma membrane
GO:0007155	P	cell adhesion
GO:0009986	C	cell surface
GO:0016020	C	membrane
GO:0030054	C	cell junction
GO:0032587	C	ruffle membrane
GO:0042995	C	cell projection
GO:0051015	F	actin filament binding

FPKM:3.70 TPM:3.43

A_BomaMG_comp10034_c0_seq1

250bp

dihydrolipoamide_succinyltransferase_[Shewanella_marina]

FPKM:2.33 TPM:2.15

A_BomaMG_comp100373_c0_seq1

672bp

PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]

GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007070	P	obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0007275	P	multicellular organism development
GO:0017053	C	transcription repressor complex
GO:0032021	C	NELF complex
GO:0034244	P	negative regulation of transcription elongation from RNA polymerase II promoter

FPKM:3.59 TPM:3.33

A_BomaMG_comp10037_c0_seq1

281bp

FPKM:1.00 TPM:0.93

A_BomaMG_comp100391_c0_seq1

361bp

FPKM:3.02 TPM:2.79

A_BomaMG_comp100393_c0_seq1

311bp

PREDICTED:_general_vesicular_transport_factor_p115-like_[Saccoglossus_kowalevskii]

GO:0000139	C	Golgi membrane
GO:0005515	F	protein binding
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0005783	C	endoplasmic reticulum
GO:0005794	C	Golgi apparatus
GO:0005795	C	Golgi stack
GO:0005829	C	cytosol
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0006888	P	endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891	P	intra-Golgi vesicle-mediated transport
GO:0008565	F	obsolete protein transporter activity
GO:0012507	C	ER to Golgi transport vesicle membrane
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016192	P	vesicle-mediated transport
GO:0044822	F	RNA binding
GO:0045056	P	transcytosis
GO:0048193	P	Golgi vesicle transport
GO:0048211	P	Golgi vesicle docking
GO:0048280	P	vesicle fusion with Golgi apparatus
GO:0048471	C	perinuclear region of cytoplasm
GO:0061025	P	membrane fusion

FPKM:7.01 TPM:6.49

A_BomaMG_comp100400_c0_seq1

699bp

FPKM:2.62 TPM:2.42

A_BomaMG_comp100424_c0_seq1

591bp

odorant_binding_protein_[Dendrolimus_kikuchii]

FPKM:4.88 TPM:4.52

A_BomaMG_comp10042_c0_seq1

246bp

PREDICTED:_zinc_finger_protein_93_isoform_X5_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding