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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp63854_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:7.96 TPM:13.87
ORF EntryO_BomoEE10023_complete:A_BomoEE_comp63854_c0_seq2
Sequence
(Nucleotide)
TTTTTTTTTTTTATTTTCGAATTATTTATTGAGACAATCTTCAACAATTACAAGAACGCT
ACAATTTGTTATGTAATGTTAATCATTAAATTCTAAATATCTATTAAATTTAAACTTAAT
ACATTTTAATTGATAAAATATTTCTAGAATAAATCACAATAGTATATCAACTTTCAGTTG
ACAAAATAATATGATTGAAATAAAGGAACACAGCTAATCAGTTAAATTTCATAAACACGC
GATATTATTAGTGTTTCACACCTTAACGTCGGAGACCCTTACAAGCATTGATTAATGCGA
CACTCGAGTCTCCTGTTCTTTTTGGTCTAAATATCATCAATATGATTTCATCAAATCCAC
TGTAGATCAATATATGTACAAATACAGAATGACCGCATCAGGCGCTTAATGTGTTATTCA
TTTACAAAAAAACACCAAATTGTATCATATTGGTAGAGTTAAAGGGGATACTTTTTAAAT
TAATCTATAGTTGTCGAAACGCAAAAGCTTACAAAATGAAATTTGACTTTTCTAAATGGG
TTTTTATACATTCTACTTCATATAATCAGTTTTTAATGAGATCTAAAATTAAAATAAATT
TAAAATACGTCCAGATATGAAAAGTTAGAAATTTGAAACCAAATAACATAAAACGTTTCA
TGTCATTACTGCTACTCTCTTCCTTTCATCTTTAAAACATTAATATTTGTCATTTTACAA
CATTTTTTCACCATTACTTATTTTCATGGATATTTCTTGCCTATAAAATTCAATCAAAAA
TAACAAACATTCCTACACAAAGGAACATTTCATGGTTTTATTTACTTAATTTAAAACGTA
TGACTTAATAGCTGTTTTTTTTTTATTATTTAAAAAACTGTAAGACCTTATATTGGTTCT
TGTATGTTTGTATATTAATCAAGAGCTCCAGAGCTATTAGCTGTCAAAATATCGTTTTAA
ATTACAAAGTGCTCTAGTTCTTCTATCAATCTTGATTATTTATTAAACTAGGCGCTGTCT
GATAGCTAGATGCAATGAGTTTCGCATCTGCTTGAAGGCTGAAAGCATTTATGGAAAGTT
GCAAATCGTATTACCATACATATCTGATGGTATCGTATTAATTTTCGATTTTTTTATAAT
ACATCAATCATAATACTATTTTTATTTTTTTAGACTGAGTTTCTAAAATGTTTATATTTT
ATTGGGGACAGAATACTTTTCGGAATTATGTACCGGTCGTATCTCACCTATAGCATTATT
GTAATACTAGAATTTGTTATTGATTATACAGCGCCTCCATGAAAATTAAACGAAGATTAG
AATTTAAGCACGATCAATAAATTTACTTATTAACTAAATCTACGCCTAGATATTATTTAT
TTTAGATAATTGGTGTTTCCGATTTACTAACACGAATTTAATGATAGTAAACAACTTTCA
TTTAAATACATACTATTTCCAGAATCGATATATTGAAAACATTTCTTGTAGGCATGTTAC
AAATTGTTGTTAATTAAATTGAATTTTACTCATTTAATCAATTCAATCTTTAGTCATCTT
ACTCACATATTTGTGTATTTTAATTTGGATAAAATGTAATAGCAGCTTAATTTAAAGAAT
TTGAACTATTAAATACAATTGTATTATATTCAAGCACATTATTTCAGTAAGAGTAACAAA
ACGGGACAGCTTTGAATTAATTTTCGACATTACTTAAAAATCAAGAGTATATAAAGGCAA
AGTGCAGCATTGATGCGTGTAAATGTTCAAATATAGTTACAATATATTTTGATATAAACA
CGATTATATTATTAGGAATTAATTTAAATGAAAGCCGCGCTCGTTGGTCGCGGCCAGCAA
ACGTTCGCGTAGCACTTCCTTACACGAATACTCGGGCAACTTCAGGTAGTGCACGCAGGT
GTTCACTGAAGGGTACGATCCATCTCCGGCGTCGACCTTCCGTACGACCGTGAGTCGAGG
ATGCAGGTTGGCGAGTCCGCCGGGCGGCAGGCTGCTGCATCCCGTCGCGAACTGCAGGAA
TGCTTTACGCTCGCAGATCGACATCTCAACCAGAACGTCAACCAGACGAAGGAATCCCGG
ACTATCTCTGGTGTATCCGAGTTTAGGCTCGGTATACTGCAGCAGATGTTCCCTGGTCCA
GACGGGGCCGCGTTCCCCGCAGAGCAGCAGGCGCAGCTCGGAAGGAGAGAAGGCCCGCAG
GCGTCGCGGCGGGAACACGCGTGCGAACCCGCGCTTGAACCACGCCACCTGGCGCCGCAC
GCCCGCCGACACCATCCAGCGCGCGCTCCACTCCGCGTACAGACGAGCGTTGTGCGCGCC
CACCTCGATATGTTCTCCGCCATCACAGAGCGGTTGCACGGCGACAGCGGGGTCGACGTT
GGGTGCGATGTGCGTCATAGTTAAAGACAATTCTTCAAAAGCGGCGCCGTCTACATTTAA
CTCACTGACACGTTTCTGCTTCTCGTTCTCGTCCAAGGATTCATCACGCATTATTTTGTC
GTACCCCTCGGCTGCTTCGAGCATCTTCTCTAAGAATCTATGTCTAATGGGATCGATTTC
TTGTAAATTCTCTTTCGTTAACTCTTCACCACACATTATACGTAAGAACGGCTCTGACAG
AGGCAAGTCAACTAGTCGGCCGTCTTGTAATACCTTAGCTAAAAATACTCCTAAAAACCA
GAAATATTTGCACACTTTATCACAGATAGGGGATTCTTGCGGAAGTGGAGCCGGAAACAG
GCCACCGGGCCGGCTCACGTAGTAACCGGGTGGCTTTTCTGTGGGCTGCATGAGGTGCAG
CGGCGCGTCGTCATCGACGTGCAGCGGCGCGTCGTGCAGCCACAGGGCGAGGTCGGCGCG
CTGCAGCTCGGCCGCCACCAGCGCGTAGAACTCCAGCGTGGGCCCGAGACCAGTGCCCTC
CTCGCCCGCGAATTCCACCTCTAATACAGACTTGCGACTCGCGTGCACTCGCATCACCTG
AATAGCAGAACGCAGCATGTCGGGATCTCTCGGAATCCGAACGCGCTCGTGTCTGAGGCG
ACCCATGCGGAATTCAGTCGCTTCCAGCTCCGCTCGGCGCGGTGACACCGTGTTGGTCGC
TCTCTGTCTGTCCAAAGCACGGTCACGTTGCGCTTGCAGCCAGACGATGGTCCGGGACGT
TCCAAACGCGGTGCATGCGAAAAACATTTGTCTTGTTTCGAGTGGAAACAGAAATGGACA
CCAATCGATCAGTTGCTGACACCAATGCGGAGTGGCGGCGGCGGCGAGCGCGAGCGGCTC
CTGCAGCTGGAGATGCAGCTTGTTGGTGAGCTTGGTGGAGAGGAAGGGCTCGGCGGGCAG
CTCGGGCGCGGCCGCTCGCAGGCGCCGCAGCACGCGCACGCAGCTCGTGGCCATGCCGCC
CTCGCTCCCCTCTGCACCCACTATACCGCCTTCTGGATCATTAGGTTCATCATCTTCAGT
GTCACTCGAAGCAAATGCGCCCTCTGAACCCTCCACCTCCTTGTATGTTAAAGTGTATGT
GGTATCTCGATGGAGGTCTGCGTGCGGCAGGCGGGCGTGCAGCAGCAGCACGGCGCGGTA
CAGCGTCCAGGAGCCGCGCGCCAGCGGCAGCGAGGCCCCGCCCGCGCTCAGTACCAGGCG
CAGCGCCGGGGCGCGACCGGTCTCGCTAGTCGCGCCGCCGCCGACGTTCTCTGGCACTTC
TTCCCAACTCTCCTCCTCTTCGGACTCCTCGTTCAGAGGTATTTCGAGATCGACAGTTTG
GTTGAGATTCGTTCTTCCCGGGCGAGGATCGAAGGCCGGTATGAGCGCTGAGAACTGTCG
CTTGAGCACGAAGTCGTCGTCCCAGGGTCGGCGCGAGCGATTGTTTTGTCCAGATCCCGA
GCTGCCACGTAGAGCCTCTAAAGCTTCTTCCTCCATCAGAGAGAGCAAATTACGAGATAC
CAAAAGTTTACTGACTACCTCCTGGTAAGTGGGTTCGTTCTCTTTGTCGCTGTCCAGCGC
CTCATCACCGTCTTCATCATCTTCCAACTCTGTCAACAACGCGGGAGCACGACAAGACTC
CAAAAAGTCTTCTAATGAGACCTGTTCGCTTTCGCTGGACGTGGATGTGAGCGACAGCGT
GAGCGCGTTCTGCGCGTTGGACGACAGCGAGGGGTAGCTCTGCGCCGCCGACAGCAGCCC
GCCGGGGAAGTTGCTCGACAACGCTAAACGCACCAAACTAGGTAGGAGACCAGAGGAATG
ATTGTTACGGTTCGAGCGCGGCACGTTGCTGCCTCGTCCTGCACTGTTGCCGCGGCCCAC
GCCCAGCGACTCCAACAGGCGTCCTGTGCCCTGCTGCGTCAAATCAGGTTCGCTAGCGCT
CATGGTGCCCGAACCGGACTGACTTTCCTTCTTATTATCACCGTATTGACTTTCCCCGGC
TTCATTTTCGTCGCACTCGTGTGCACTGGATTCGGGTAACGGCTCTTTGGCGGGATAAGG
TTTGGTGATATCCGTAATGCTCGTAGGTCCCATTTCCATGTTGGTAAACGATGTATTCCC
CAACTCGGTGATGCAATTGTTACTTTCGGCGCCCAACGTCAATGACTCCACTATTGTCGC
GAGATCTATGTCAAACACAGAGTTTATATGATGCGTCGAATTATTAATGGCAGAGAGATC
TGTGGCGTGCGTACGGGGTCTTGACATATTACTGACCATCTCTTCACTCGATATATTGTC
CGCTGACGAGGCCTGTTCCGTCGACGCTACTGATACCTGATCGACAGAAGTGGCGTCAGG
CAAACTGGGAGTTGAGTGACTCTTCCGGCTGGCTTTTGAACTTTCGATGACAGTACCACC
GCTCACAACTTTCAAGTCGAACTTTCCCTCTGCACCCATGCGATACGAATTGCGAACTCC
GTGGTCCCACCTGACATCGACCCACCCGTTGTGCAGTTCGGAAGTGAGAGTGCCGAGTGC
GGGGTGCGGCCCGTCCTGGTCGCGCCACTTCCAGTCGGGGCCGCGGGAGACGCGCGCGCC
CGCACACACGCCGCGGCCGCGCG
(5063 bp)

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