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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26007_g1_i6
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:6.30 TPM:4.83
ORF EntryO_BomoASG10023_complete:A_BomoASG_c26007_g1_i6
Sequence
(Nucleotide)
GAGGTAGCATTTTTTCACAACTTCGTAAAATGGCGGACGGCGATGTCGATATAGATTTGT
ACGCCGATGATATAGAATCCGATTTTAATCGCCAGGATGAATTTGCTGGCGAAAATGTGG
ATTTATATGACGACGTGATCTCAGCACCAGCTTCGAAGCCCGAGGACGGTGACGGTCCTC
CCATCATTGCTCCAAACCAGCATCCACCTGAGGAAACTAACGGCAACGCCTCATACCACG
GCCCGGTTCACGGACATCATGGCCGCCGTTTTCAACTTTACGTCGGCAACCTAACATGGT
GGGCAACGGACCAAGATATTGCGAACGCGATCTCGGATGTCGGTGTCTCCGATTTTCAAG
ATGTGAAGTTCTTTGAGAACAGAGCCAATGGTCAGTCCAAAGGATTCTGCGTTATATCTC
TCGGTTCAGATCAATCAGTCAGGATGGTGATGGAACGTCTTTCTAAGAAGGAGATACACG
GGCAACATCCAGTAGTTACATTGCCTACTAAACAGGCGTTGAATCAGTTTGAAAGTCAGT
CAAAGACCAGGTCGACGCCTCCTGGTCCCAATAATCCTGGAATGAGAGGACCCCATCCAG
GCGGGCCGCCTGGTCCTCATCCCGGAGAATTTTTTGGTGGGGGACCGAACGGTCCAGGTG
GGGGCGGACCTCGTATGATGCTCCCAGGTCCGGGTCCGCACCAGCTTCGTGGGCCGCCGC
CGCACCACATGGGCCCACACCAGGGCGGGCCGCATCCCATGCAACATCAGCCGCAGCCGC
ACCAGGCCCCGCCACACCGGCCCCCTATGCAGTTTGCGGGCCCTCCGCAGATGCAACGCG
CGCCGGGCCCGCGTCCGCCGCCTCCCGACTGGGCTGCGCGAGCGCCGCATCCTATGTCTC
AGCCCGCGCCTCATTATGGACCCCCCCATCATGGAATGCCGCATCAGATGCCACCACCTC
ATCCTGGCATGCCGCCTCCGCACCAGTTGCCGCCGCACCAGCCGCCGCGGGGACCGGCGC
CCATGCCGCAGCATCCTGTAATACCTGGAGCTCCAGCACCACACGTGAATCCTGCGTTCT
TCAACCAGCAGCCACCGTCGCAGCCGCCGCCAATGCAGGCCCCGCAACCTGGACCACCCG
GTCCAGGTGCTCCGTACGGTCATCCAGCCCATGGAGCACCACCTCCAGCACAAGGGCCTC
CACCCGGGTCTAGACAACCGTACGGTCGGCCACCACAGAGCTATCCGCCTCAAGCGGATC
CGGCTCGTCCCCCGCACCACCCGGCACCCATGGTCCCACAGCACGCGGCCTCCCTGGCGC
CCCCCATGCCGGTCATCAGCGAGGCCGAGTTCGAAGAGGTGATGAGCAGGAACCGCACCG
TCTCCTCCAGTGCCATTGCTCGGGCTGTCAGTGACGCTGCCGCTGGCGAGTACGCCTCCG
CCATCGAGACGCTCGTTACCGCCATATCACTCATTAAACAGAGCAAGGTGGCGCAAGACG
ACCGCTGCAAGATTCTGATCTCGTCGCTGCAAGACACGCTGCACGGCGTCGAGACGAAGT
CTTACAGCAGCGGCGAGCGGTCCCGCCGCTCCCGGTCCCGCGAGCGCGAGCCGCGACACC
ACCGCGCCCCGCGCCGCCGCGACCGCTCTTCCAGCCGCTACCGGGACCGCAGCCGCGACC
GAGAGGATAGGGACAGGTATTACAGGGATTACCGTGAGAGGGAGCGCGAGAGGTCTCGCT
CGAGGGATCGCGATCGTGCTGATCATTACAACAGGGGACACAGTCGTGAGGAGAGGGCAC
GTAAATCTCCAGCTGAAGCGACAGCAGAGGGAACCACAGCCGAGGCCGGGTCGAAGAGCC
GCAGCACTGGAGCGCCGTACTACGACGAGCGGTACAGGGAGAGACGCGACAGAGACCCGC
CGCCCGCGGATCGAGATCGCGACCGAGACCATCGCAGGGACGCTAGACACTAGACACTAA
AAGAACCATTGAGTGAACTACTCAATATCGCCACATCAGCTGACCAATTAGGGCATCCAA
GATTTTTTGCTATCGGGCCGGCGTCACGTTGAAGTGGAATTAAATTGACACTTGACAGTT
CTGACAGATGTTTGCGCGGAAAAGGGATTTACAAAAATGGCGCGAAAGTTTCTGATTCTA
AATTCAAACAAACGATTGATTTAATTTAAAATAATTCGTTTGAGCAACGTTCATGCGAAT
CAAAATTCATTGACTGCGCGGTTATATGTGGTGACACCGACATCGTTCCGTCAGCCTAGT
CTAATCAAGTGACTTTTGGTGTAAACTAATATTGTGTGGTGCGTCAGAGGCGACGACCGC
GTGCGTGAACTACTGATACTGCCACGAAAATAGCTTCAAATTGTTGATCAAAAGATGGTG
GATCGAGTTGATCTGCTGCTAGGGCGGTTTAGTGTAATCGAGAGCCTGATTCGACAGATT
AGATATTCATTATTTTCAACTTCATATGAAACAAACATCTCAAATTAAAATCGGTCTCAT
ACATGAAACATTAAATAGTGATGGTAAAAATGATATCCATTCACACTGATGATGAAAATA
ATGTTATGTTAATTTAGATGACAAAATAGTTTATTACAAATTAGTAAGTATTATCCCGGA
ATGCCCATTTGTCTCAGATATATCGTTTGTTTTACGAAAATTGGTTACACTCTTGGTACA
AATCACTGTACTTATTACAGTCAAGTGTGACTGTAGAAAATTAACGTAAGACCTATCCAA
CGCCGACAAGTCGTTTTCAAACATCTAATAATGTATTGTATTCATTCACGCATGGTATAT
TTATAAGGTTAAAAAAGGATGATAAACTTTATATTTAAAACAGAGAAACATTTTATCAGA
ACACGACCAATAGCAAATTATCCAAAATTAGAAAAGTGCGCTAGTAATGAAAATTTTATT
GAAAAAGGTCAAAAATATCCTAGTATTATCTTGAATACTTTTGATACAATTGATAAAGAT
TAAAATATAAATAGTTTTTATTACAAATAAACATTTTACACAATTATATCGATAAAAGCA
GTTTTCAATCTAAAGCCATGAAACATCTGAAAATTAAGATTGTGACTGATTTTATAATTT
TTAGTATCAATATTACTCATGTTGATTGTTAATGGATTGAATTAGTCCAACAAGAACCTT
AAAACCAAATATGTTTAAAATTCAATTTTGCTGTTTGTCACAACATTCCATGGTCTAAAT
GTTTGCGAATTGTTTTAAACTTTCATTCGTGGTTTTTTTTTGTATTTTCCTATTTTGTAG
TAGTCTAAACGTAAGTATTAGGTTAAGTTCAAACAATTTATGGATTGTTCCATACAAACT
AGACGTGAC
(3369 bp)

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