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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000001-TA|BGIBMGA000001-PA|undefined
         (495 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi...    38   0.002
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M...    37   0.006
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc...    36   0.010
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch...    36   0.013
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom...    36   0.013
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces...    33   0.091
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||...    33   0.12 
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi...    32   0.16 
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo...    32   0.21 
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc...    32   0.21 
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ...    31   0.37 
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|...    30   0.64 
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF...    29   1.1  
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc...    29   1.1  
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation...    29   1.1  
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch...    29   1.1  
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c...    29   1.5  
SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|...    29   1.5  
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    29   2.0  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        28   2.6  
SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor c...    28   2.6  
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    28   3.4  
SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor |Schizosacc...    28   3.4  
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo...    27   4.5  
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    27   6.0  
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos...    27   6.0  
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce...    27   6.0  
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac...    27   7.9  
SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces pomb...    27   7.9  
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb...    27   7.9  
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit...    27   7.9  

>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 451

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 32/176 (18%), Positives = 76/176 (43%), Gaps = 2/176 (1%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           ++  +E +    S+++ D +  +   E+S+    ++   ++++ +S+  DSD + + S +
Sbjct: 96  AHSSSEASGSGSSSDESDSSSSES--ESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS 153

Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
             +       SS    +  +ESS +D  +  +         +  SD   S+S       S
Sbjct: 154 ESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSS 213

Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
             + S     ++ SE SS  + S   +SD     +++ S    +  D  S++ +++
Sbjct: 214 EGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKD 269



 Score = 37.9 bits (84), Expect = 0.003
 Identities = 35/176 (19%), Positives = 79/176 (44%), Gaps = 4/176 (2%)

Query: 309 SNERNEVTAKD-DSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
           S+  +E +++D DS++    +  +   E S +++ ++  ++E+  + N+  S  + ++S 
Sbjct: 133 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 192

Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIET---FQTSSSDGECSASAPSI 424
           +  +       SS       +E SD   ++  ++ +         +SSSD E  +S+   
Sbjct: 193 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 252

Query: 425 ALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDT 480
              S  + S+    + +S+ SS  S SE  +S       ++SS +       +SD+
Sbjct: 253 DSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDS 308



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 34/176 (19%), Positives = 76/176 (43%), Gaps = 7/176 (3%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           S + +  ++  DS ++      D    +S + ++++   +++   S+  +S+ +  D+ +
Sbjct: 123 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDS 182

Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
                     SS   E+  + SS  D  +  + +    +  +SSS+ E S+     +  S
Sbjct: 183 SSSSSDSESESS--SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSS 240

Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
             + S+   + ++S  SS  S+SE  + D      +  S D     D +SD+ + E
Sbjct: 241 SDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSED-----DSSSDSSDSE 291



 Score = 37.1 bits (82), Expect = 0.006
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           S++    ++ +DS  D   +  D   E+S+  + ++   + ++ +S+  D+D + + S +
Sbjct: 186 SSDSESESSSEDS--DSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS 243

Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
             +       SS    +  +ESS  D  +  N     +   + SSD E  +S+       
Sbjct: 244 ESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSED----- 298

Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
               SD    T++S +S   S SE GNS+
Sbjct: 299 ----SD---STSSSSDSDSSSSSEDGNSN 320


>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 500

 Score = 37.1 bits (82), Expect = 0.006
 Identities = 32/179 (17%), Positives = 74/179 (41%), Gaps = 5/179 (2%)

Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG 370
           E    ++ + S   V K    K +E S++ +++    +E++  S+E +S  + ++S +  
Sbjct: 57  EAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSE 116

Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQK-----KIETFQTSSSDGECSASAPSIA 425
                      +    + ESS +  ++ +++++     KIE  + SSSD    +S+    
Sbjct: 117 SSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESE 176

Query: 426 LPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
             S  + S+   +     E      SE  +       ++  S D  +  D  S++ + +
Sbjct: 177 SESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSED 235


>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 822

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 4/110 (3%)

Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKS----NEPDSDVNVTD 365
           N+ N     +D   D +  P+ K     +  AKAN  +   DE+S     E DS+  V  
Sbjct: 53  NDSNYDLKPEDDEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRK 112

Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDG 415
           +    K+   +     + +++ + S D++ +    K KK +    S  DG
Sbjct: 113 NKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDG 162


>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1031

 Score = 35.9 bits (79), Expect = 0.013
 Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 5/152 (3%)

Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG 370
           + N    +++ A D + T    VE+ + T+   N   T+N  + N  D     ++  +  
Sbjct: 17  KENVKIIREEEAKDQESTDDIAVEDGTGTSPDLNFFSTQNVMQMNFEDEYSEFSNEDDEA 76

Query: 371 KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKI-ETFQTSSSDGECSASAPSIA--LP 427
           + I   F  S IP         D+++   + Q+ + E   T+++D + S +  S+A  + 
Sbjct: 77  E-IDNSFADS-IPNEPEIPDMQDEYSRDSHSQQSVEEQNNTTNTDEDASVNEFSVAADIS 134

Query: 428 SHHTMSDWVGQTTNSEESSYCSQSEGGNSDVG 459
             +T+     ++T    +     +  GN DVG
Sbjct: 135 DVNTLGKDNSESTEEPVNEVNETATLGNEDVG 166


>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 569

 Score = 35.9 bits (79), Expect = 0.013
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)

Query: 299 QARLSGNKIVSNERNEVTAKDDSANDVDKTPIDK-VEENSTTTAKANVLKTENDEKSNEP 357
           +A+ + ++    E+++V  + +S ++ +K  + K VEE  T     +  KTE D K+ E 
Sbjct: 404 EAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKET 463

Query: 358 DS-DVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTS 411
           DS + N  D     K    +   +   E    ++ + D   V +K++K ++ +T+
Sbjct: 464 DSIEANDKDEKTDSKETEDKVEETESKE-ADVKAKETDSIEVDDKEEKTDSKETA 517


>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 324

 Score = 33.1 bits (72), Expect = 0.091
 Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 22/176 (12%)

Query: 296 KILQARLSGNKIVSNERNEVTAKDDSANDVDK-----TPIDKVEENSTTTAKANVLKTEN 350
           KI Q     ++  + ER ++   D+  N+  +     T + ++E+   TTA+ + +++  
Sbjct: 64  KISQMEADLSQKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSL 123

Query: 351 DEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKK--IETF 408
           + K N P        S NR K    R ++     + + E   +  A++KN++KK   +  
Sbjct: 124 NTKENTPQQP---KKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKIL 180

Query: 409 QTSS-------SDGECSASAPSIALPSHHTMSDWVGQTTNSEESSY----CSQSEG 453
           + +        +DG C  ++ S  L  HH +     Q   ++ + Y    C Q EG
Sbjct: 181 EEAGLVAVDIPADGNCLFASISHQLNYHHNVK-LNSQALRNKSADYVLKHCEQFEG 235


>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 247

 Score = 32.7 bits (71), Expect = 0.12
 Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 1/104 (0%)

Query: 299 QARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD 358
           Q   + NK+      + T      +D++   +  V+ N       NVL   + +  NE +
Sbjct: 107 QVASTNNKLTPLPSLQKTTSSSEGSDIEMEAMYPVDGNDPDPINVNVLAQMHQQMLNEQE 166

Query: 359 SDV-NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNK 401
             +  +  S  R KR+G    +    +NV  ++ ++D   ++ +
Sbjct: 167 ESLGGIEASVQRQKRMGYAMNTELSEQNVLLDNMNNDADRIERR 210


>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 374

 Score = 32.3 bits (70), Expect = 0.16
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 338 TTTAKANVLKTENDEKSNEPDSD-VNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFA 396
           TT + ++V  T +   S+ P S     T SP+          SS    +  + SS    +
Sbjct: 125 TTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSS----SSSSSSSSSSSSSSSSSS 180

Query: 397 NVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNS 456
           +  +      +  +SSS    S+S+ S+ + S  T S     +++S  SS  S+    +S
Sbjct: 181 SSSSSSSSSSSSSSSSSSSSSSSSSSSVPITS-STSSSHSSSSSSSSSSSSSSRPSSSSS 239



 Score = 29.5 bits (63), Expect = 1.1
 Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 5/152 (3%)

Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           L+GN ++    +  +    +++    +P      ++TTT   +   + +   S+   S  
Sbjct: 117 LTGNGVLQTTVSSSSVSSTTSSSSSSSPSSS---STTTTTSPSSSSSSSSSSSSSSSSSS 173

Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
           + + S +          SS    +  + SS      + +      +  +SSS    S+S 
Sbjct: 174 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSR 233

Query: 422 PSIALPSHHTMSD--WVGQTTNSEESSYCSQS 451
           PS +     TMS   ++   T +  SS  S S
Sbjct: 234 PSSSSSFITTMSSSTFISTVTVTPSSSSSSTS 265


>SPAC17C9.03 |tif471||translation initiation factor eIF4G
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1403

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 315 VTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIG 374
           V AK ++++   K P      ++T T+ AN   T      N+P +D+N TD   +  ++ 
Sbjct: 217 VAAKPEASSTATKGPRPTTSASNTNTSPANGAPT------NKPSTDINTTDPATQTTQVS 270

Query: 375 V----RFRSSWIPENVRNESSDDDFANVKNKQ 402
                    S  P N  + S+  +  N   K+
Sbjct: 271 ASNSPALSGSSTPSNTSSRSNRQNHGNFSEKR 302



 Score = 26.6 bits (56), Expect = 7.9
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANV-LKTENDEK-SNEPDSD-VNVTD 365
           SN+ N   A +++    +K  +       T T++AN   KTE+  K ++E D++  N + 
Sbjct: 23  SNKSNSTKASENNTATAEKQAVKPSGVEPTNTSRANAQKKTESTGKITSEADTEKYNSSK 82

Query: 366 SPNRGKRIGVRFRSS---------WIPENVRNESSDDDFANVKNKQKKIETFQTSSSD 414
           SP   K   V  +SS         W  +N    S++       ++ +K ET      D
Sbjct: 83  SP-VNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQHQKPETSSQIGKD 139


>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 997

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 1/99 (1%)

Query: 308 VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
           V  E+N  T K  +    ++  ++K +E+           T+    S    S  ++TD+ 
Sbjct: 423 VGKEQNH-TEKQVAIETPEQQKVEKEDEHLNLQGSFIEESTKQPISSKPSTSSPDMTDAA 481

Query: 368 NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIE 406
             G+     FR   +  N    S+ D F+N+  K+   E
Sbjct: 482 TGGRVSSSSFRDKILQTNFSPRSTIDSFSNISKKRNSEE 520


>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 599

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 5/151 (3%)

Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLK--TENDEKSNEPDSDVNVTDSP 367
           N  N  +  D S++     P+  +   S    K N  K   E+   +   +S+  +    
Sbjct: 233 NRANFFSINDASSDSSSDAPLRTLSSPSRLRMKDNDRKYLVEHSPAALIKESET-IDGID 291

Query: 368 NRGKRIGVRFRSSWIP-ENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
           ++  R   R  S   P E+  N+ S  D ++ K  + K E    +    E S S PS A+
Sbjct: 292 DKSLRSSTREVSVESPNEDSVNDDSSSDVSDEKETEAKHEIRAPAIIVRETS-SHPSTAV 350

Query: 427 PSHHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
           PS +  ++    T +   ++  S S   NSD
Sbjct: 351 PSENDTTESENDTLSESSTTSISSSPSENSD 381



 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 6/49 (12%)

Query: 321 SANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
           S ND  ++  D + E+STT+  ++   +EN + S+    D+   DSPN+
Sbjct: 352 SENDTTESENDTLSESSTTSISSS--PSENSDTSD----DLTKVDSPNK 394


>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 362

 Score = 30.3 bits (65), Expect = 0.64
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 145 RSELSDNGLRYGGSSKYFVVNSYYETIIDNELLSYRKRKKELPKEN---VSTPLEPTAKN 201
           +  +S+NG  +G +    +    ++T+  + L  YR   +E   E+   +ST +    K 
Sbjct: 45  KQHISENGQNFGSAISSNISQRNFKTLRASHLSQYRDCNRENNTEDKNVISTGIAVNEKY 104

Query: 202 KAIVKLKAK 210
           ++++KLK K
Sbjct: 105 QSVLKLKEK 113


>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
           eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 918

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 322 ANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSW 381
           ++D D   +D  EEN  T+++   LK ++D  S E  S+     S               
Sbjct: 9   SSDSDAESVDSSEENRLTSSR---LKKQDDSSSEEESSEEESASSSES------------ 53

Query: 382 IPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTN 441
             E+   ES  ++      K+K +   + S SD E S             +SD     + 
Sbjct: 54  --ESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESE 111

Query: 442 SE-ESSYCSQSE 452
           SE ES   S+SE
Sbjct: 112 SESESEEESESE 123


>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
           Bms1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1121

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 302 LSGNKIVSNERNEVTAKDDSANDV-DKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSD 360
           ++G+ + S E  E  ++DD   D  D    +   +N    +  + +  EN+E ++E D  
Sbjct: 596 ITGSLLDSIEGQEEVSQDDEEGDFEDLEDEENSSDNEMEESSGSSVTAENEESADEVDFQ 655

Query: 361 VNVTDSPNRGKRIGVRF 377
               ++  + + + +RF
Sbjct: 656 TEREENARKKEELRLRF 672


>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
           factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 321

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 13/38 (34%), Positives = 25/38 (65%)

Query: 384 ENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
           E++  ES + DF+++K K+KK ++   S+ + E  AS+
Sbjct: 101 EDITTESGELDFSSMKKKKKKKKSADLSAFEKELEASS 138


>SPAC1952.17c ||SPAC890.01c|GTPase activating
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 619

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 295 VKILQARLSGN--KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTA---KANVLKTE 349
           +K+LQA  + +  K+++        +  S ND D + + K   N+   A   K  VL T 
Sbjct: 431 IKLLQAHFNVDMPKLLNLTFELQHLRKTSKNDEDMSYVRKNSYNTNALANSLKNRVLSTY 490

Query: 350 NDEKSNEPDSDVNVTDS 366
           N  K+N P S  + TD+
Sbjct: 491 NTVKANVPQSSSSYTDN 507


>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 778

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 306 KIVSNERNEVTAKDDSANDV--DKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSD-VN 362
           +++S E   +    D  N++  +K   +KVEE+        V + E+D++ ++ DS+ + 
Sbjct: 65  EVISLEPTHLINDIDDDNEIIEEKKETEKVEESELEPRYTRVFRDEDDDQKHQLDSEAIK 124

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANV 398
           + D  + G           I  N+ +E+    +A V
Sbjct: 125 LLDIADHGNEEISMDSQLEITGNILSETEKMAYAGV 160


>SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 197

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 141 RRQSRSELSDNGLR-YGGSSKY-----FVVNSYYETIIDNELLSYRKRKKELPKENVSTP 194
           ++Q+R +L D+G++ YGG + Y     F+ +  Y   + +E L  R+  +E  K+++  P
Sbjct: 93  KQQTRYKLEDSGMKVYGGLNYYCSKDCFLKSCQYMVELSDEPLWIREDAREAMKQHLD-P 151

Query: 195 LEPTAKNKAIVKLKAKD 211
            +  A  K +   K +D
Sbjct: 152 RQDEAFRKELENKKIED 168


>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1038

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)

Query: 350 NDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFAN 397
           + E+S   D + N+T S N GK       S      +  E  +DD  N
Sbjct: 36  SSEESESEDKESNLTSSENIGKNPERELNSDGTDRIIEEEEEEDDIEN 83


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 424 IALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNR 483
           I L S  T+   +GQ  +S ES       G  + +  H     ++  F  ++P++D G R
Sbjct: 647 INLASLETLEP-IGQLLSSYESGILLSERGDITPITPH----KNFRLFGCMNPSTDVGKR 701

Query: 484 EIQQLF-ARFT 493
           E++  F +RFT
Sbjct: 702 ELEPSFRSRFT 712


>SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor
           complex subunit Rrn5|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 556

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 165 NSYYETIIDNELLSYRKRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDE 215
           ++ +ETI  + LL+ ++ K +L   +V T L+ T+K+   +  +  DSDDE
Sbjct: 441 DALFETIPLSNLLAQKRMKDKLKGSDVFTTLKITSKSLHNID-EHSDSDDE 490


>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 418

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)

Query: 295 VKILQARLSGNKIVS-NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
           VK+++   +    +S N+ +EV  K  S   +D+  +D+VEE+S+     +  K    +K
Sbjct: 244 VKLIERESNSCSTISINKEDEVVPK--SPLSLDRKKVDEVEEHSSIAKLDSEEKIRETKK 301

Query: 354 SNEPDSDVNVTDSPNRGK-RIGVRFRSSWIPENVRN--ESSDDDFANVKNKQKKIETFQT 410
            N   S  +++  P       G    S    +N  N   +S DD +     +     FQ 
Sbjct: 302 KN---SSTSLSPDPTSDNFEWGSWVSSQDTSKNSSNLASASVDDVSEESQVEPNTLIFQN 358

Query: 411 SSSDGECSASAP 422
            SS    S SAP
Sbjct: 359 FSSP-STSLSAP 369


>SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 539

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 13/55 (23%), Positives = 25/55 (45%)

Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDS 359
           N I S   NE   K +  +  D +P+   + + T+  + +   +E+ +   EP S
Sbjct: 482 NGIKSEPENEKKLKTEETSKTDDSPVTDAKPDVTSNGEPSTATSESKDSVLEPSS 536


>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
           Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 783

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 304 GNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD 358
           GNKI  +E NE+  ++    +  +T +DK E N T+  K+    +      NE D
Sbjct: 407 GNKI--SENNELLNENRVLKEKLQTYLDKKESNVTSKIKSTAENSSKPLSMNEAD 459


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 1/166 (0%)

Query: 303 SGNKIVSNERNEVT-AKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           S     S   +E T +  +S++ +D + +      S+T+ + ++  +          S  
Sbjct: 116 SSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTF 175

Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
           +   S     +  V   SS    +    S+   + +  +      +  +SSS    S+S 
Sbjct: 176 SSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSL 235

Query: 422 PSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
            + ++PS  + S     + +S  SS  + S   +S +    ++ SS
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSS 281


>SPCC306.04c |set1||histone lysine methyltransferase
           Set1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 920

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 399 KNKQKKIETFQTSSSDGECSAS--APSIALP 427
           K K +K+E   TSSS+ E  AS  +PS A+P
Sbjct: 551 KKKYEKMEVDYTSSSETESDASILSPSAAIP 581


>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1957

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)

Query: 302  LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
            +S  + +SN+R + ++  D+ N+++    D   +NS+   K   + +  D+KS E  S V
Sbjct: 1421 ISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESINSSLDDKSFELASAV 1480


>SPAC1751.01c |gti1||gluconate transporter inducer
           Gti1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 720

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 402 QKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFH 461
           ++++  F  S       AS  +I+ PS  ++SD +   ++   SS  + S  G++D+   
Sbjct: 109 EEEVSAFTVSVPVDVDVASHVNISSPSAPSLSDNLFPGSSFSASSQQNPSSPGSNDIKSE 168

Query: 462 YAADSSWDPFALLDPTSDTGNREIQQLFARFTL 494
           +AA  +     +L PTS T +      F+   L
Sbjct: 169 FAAVKN---EYVLSPTSPTTSAAFPSSFSSLPL 198


>SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 123

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 181 KRKKELPKENVSTPLEPTAKNKAIVKLKAKDSDDEDY 217
           K  K++ +    +P E     K  VK  AKD+ D DY
Sbjct: 47  KASKKIDENKDKSPQEMAENAKQSVKQTAKDAKDTDY 83


>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1389

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)

Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           E   +DDS N VDK   ++   +ST   +  VL    +   N P S +
Sbjct: 335 ETKEEDDSENSVDKKENEEDIISSTMMPQDEVLANLTEAYENAPQSTI 382


>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
           factor complex subunit Ysh1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 775

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 335 ENSTTTAKANVLKTENDEKSNEPDS-DVNVTDSPNRGKRIGVRFRS--SWIP--ENVRNE 389
           E+ T T K   +K E  E S +  +  V  ++   R + + V  R+  + +P  E  +N+
Sbjct: 660 ESMTKTEKGVEIKFEKYEASIDFSTMKVECSNEALRSRVVHVLSRAINTILPFSEASQND 719

Query: 390 SSDDDFANVKNKQKKIETFQTSSSD 414
            S+DDF N ++   KI   QT   D
Sbjct: 720 VSEDDFENEESDDDKIFEQQTKIED 744


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.313    0.128    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,072,960
Number of Sequences: 5004
Number of extensions: 85768
Number of successful extensions: 340
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 288
Number of HSP's gapped (non-prelim): 53
length of query: 495
length of database: 2,362,478
effective HSP length: 76
effective length of query: 419
effective length of database: 1,982,174
effective search space: 830530906
effective search space used: 830530906
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)

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