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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000001-TA|BGIBMGA000001-PA|undefined
         (495 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)                 42   9e-04
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)                  39   0.008
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)             39   0.011
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.024
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.057
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.40 
SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79)                33   0.40 
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.40 
SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9)                      33   0.40 
SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26)                33   0.53 
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)               33   0.53 
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)                    33   0.70 
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.70 
SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.70 
SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.92 
SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4)                   32   0.92 
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)         32   1.2  
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)               32   1.2  
SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35)            32   1.2  
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5)                     31   1.6  
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)              31   1.6  
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   2.8  
SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.7  
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)                 30   3.7  
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.7  
SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091)          30   3.7  
SB_52671| Best HMM Match : SPAN-X (HMM E-Value=2.6)                    30   3.7  
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.7  
SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)                30   4.9  
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   4.9  
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   4.9  
SB_34673| Best HMM Match : UK (HMM E-Value=0.6)                        30   4.9  
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   4.9  
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)                 30   4.9  
SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08)                    30   4.9  
SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55)                29   6.5  
SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.5  
SB_8603| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   6.5  
SB_19950| Best HMM Match : AIP3 (HMM E-Value=1.7)                      29   6.5  
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)                  29   6.5  
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.6  
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)                      29   8.6  
SB_3273| Best HMM Match : Neuromodulin (HMM E-Value=1.9)               29   8.6  
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)                  29   8.6  
SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.6  
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)                   29   8.6  

>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
          Length = 440

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 9/155 (5%)

Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTE-NDEKSNEPDSDVNVT 364
           K   N+  +  AK +S+++ D +  D+ EE     A   V KT    E S+E DS     
Sbjct: 195 KKADNKGKKTQAKQESSSEEDDSS-DEEEEKPKKKADDKVKKTPAKQESSSEDDSSNEEE 253

Query: 365 DSPNR-----GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS- 418
           + P +     GK+   +  SS   ++  ++  +       +K+KK    Q SSSD   S 
Sbjct: 254 EKPKKKADVKGKKTPAKQESSSGDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSD 313

Query: 419 -ASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSE 452
            +S     +P+   + +        E SS  S SE
Sbjct: 314 DSSDEDTKMPTKSKLKNGTKTKAKEESSSSDSSSE 348



 Score = 41.5 bits (93), Expect = 0.002
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)

Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
           K    ++   + +DDS++D D+ P  K +     T       +E+D    E +      D
Sbjct: 139 KKTPTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDSSDEEDEKPKKKAD 198

Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS 418
             N+GK+   +  SS   ++  +E  +       +K KK    Q SSS+ + S
Sbjct: 199 --NKGKKTQAKQESSSEEDDSSDEEEEKPKKKADDKVKKTPAKQESSSEDDSS 249



 Score = 33.9 bits (74), Expect = 0.30
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 312 RNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGK 371
           + E +++DDS+++ D+ P  K +     T       +E D+ S+E + +     + ++ K
Sbjct: 176 KQESSSEDDSSDEEDEKPKKKADNKGKKTQAKQESSSEEDDSSDE-EEEKPKKKADDKVK 234

Query: 372 RIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS 418
           +   +  SS   ++  NE  +        K KK    Q SSS  + S
Sbjct: 235 KTPAKQESS-SEDDSSNEEEEKPKKKADVKGKKTPAKQESSSGDDSS 280


>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
          Length = 323

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 8/169 (4%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEEN--STTTAKANVLKTENDEKSNEPDSDVNVTDS 366
           SNE +E    D+S    +    DK  E+  S  + K+N     N+   ++ D + N +D 
Sbjct: 104 SNESDESNESDESNESDESNESDKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDE 163

Query: 367 PNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIAL 426
            N          S+   E+  NES + + ++  N+  +      S+   E + S  S   
Sbjct: 164 SNESDESNGSDESNGSDES--NESDESNESDESNESDESNESDESNGSDESNESDES--- 218

Query: 427 PSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLD 475
            +    S+   ++  S+ES+   +S G +       + +S+    A+ D
Sbjct: 219 -NESDESNGSDESNESDESNESDESNGSDESYESDESDESNESGLAVTD 266



 Score = 37.9 bits (84), Expect = 0.019
 Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 10/150 (6%)

Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
           ++V++ER   ++KD+S    +    D  E N +  +  +    E+DE SNE D + N +D
Sbjct: 71  EVVTDERGISSSKDESDESDESNESD--ESNESDKSNESDESNESDE-SNESD-ESNESD 126

Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIA 425
             N   +     +S+    + RNES + D  +  N   +      S+   E + S  S  
Sbjct: 127 KSNESDKSNESDKSN--ESDKRNESDESDEDDESNGSDESNESDESNGSDESNGSDES-- 182

Query: 426 LPSHHTMSDWVGQTTNSEESSYCSQSEGGN 455
             +    S+   ++  S+ES+   +S G +
Sbjct: 183 --NESDESNESDESNESDESNESDESNGSD 210


>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
          Length = 521

 Score = 38.7 bits (86), Expect = 0.011
 Identities = 32/167 (19%), Positives = 68/167 (40%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           S N    N   + +  D+S++D   +     + ++T  + +N    EN    N   ++ N
Sbjct: 75  SDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSN 134

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
             +S +   +      ++   +N   ++S+ D +   N      T   S++D   S ++ 
Sbjct: 135 QDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSS 194

Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWD 469
           S    S ++ SD      ++ ++S    S   NS+    Y  +S+ D
Sbjct: 195 SGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSD 241



 Score = 35.5 bits (78), Expect = 0.099
 Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 4/182 (2%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           S N    N  ++ +  D+S +D   +     + +++  + ++   T+N    N    + N
Sbjct: 190 SDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSN 249

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
               PN           +  P+N  +++S+ D +N  N          S++D   S ++ 
Sbjct: 250 ----PNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSNNSN 305

Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
                S ++ S+   Q  ++ + S    S   NS+     + +S+ D     + TSD  N
Sbjct: 306 PENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPN 365

Query: 483 RE 484
            +
Sbjct: 366 TD 367



 Score = 35.1 bits (77), Expect = 0.13
 Identities = 31/158 (19%), Positives = 67/158 (42%), Gaps = 3/158 (1%)

Query: 325 VDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPE 384
           + +T I + +      ++  ++K   D  ++E  +  N T S N          S+   +
Sbjct: 20  IPQTRIPRTQITRPWISRIGIIKKNPDNSTSENSNSYNST-SDNSTSDNSTSDNSN--SD 76

Query: 385 NVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEE 444
           N  +++S+ D +N  N      +   S+SD   + ++ S      ++ SD      ++++
Sbjct: 77  NSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQD 136

Query: 445 SSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
           +S    S+  NS+     + +S+ D     + TSD  N
Sbjct: 137 NSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSN 174



 Score = 34.7 bits (76), Expect = 0.17
 Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 7/186 (3%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK-----SNEP 357
           S +   S+  N   +  D++   +  P +   +NS +          +D K     +N  
Sbjct: 94  SSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNS 153

Query: 358 DSDVNVTDSPNRGKRIGVRFR-SSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGE 416
           +SD + TD+ N            +   +N   ++S  D ++  N      T   S+SD  
Sbjct: 154 NSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNS 213

Query: 417 CSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDP 476
            S ++ S    S ++ SD      ++ ++S    S   NS+     +AD+S +P      
Sbjct: 214 NSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNPNNSNTDNSSSADNS-NPDNSNSD 272

Query: 477 TSDTGN 482
            S+T N
Sbjct: 273 NSNTDN 278



 Score = 33.5 bits (73), Expect = 0.40
 Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 4/182 (2%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           S N    N  ++ + KD+S  +   T      +NS      +     N + SN  +S  +
Sbjct: 230 SDNSYTDNSTSDNSKKDNSNPNNSNTDNSSSADNSNPDNSNS--DNSNTDNSNSDNSSSD 287

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
            ++S N          S+  PEN  +++S+ + +N  N          S+++   S ++ 
Sbjct: 288 NSNSDNSNTDNSTSNNSN--PENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSN 345

Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
           S    S ++  D +     + ++S    S  GN +     + +S+ D     + +SD  N
Sbjct: 346 SDNSTSDNSNPDNLTSDNPNTDNSGSDNSSSGNFNSDNSTSDNSNSDNSTSDNSSSDNSN 405

Query: 483 RE 484
            +
Sbjct: 406 SD 407



 Score = 33.1 bits (72), Expect = 0.53
 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 5/152 (3%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTT-TAKANVLKTENDEKSN-EPD-SDVNVTD 365
           S+  +   +  D++N  + T  +   ENST+  + +N    +N    + +PD S+ N ++
Sbjct: 281 SDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSN 340

Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIA 425
           S N          S+  P+N+ +++ + D +   N          S+SD   S ++ S  
Sbjct: 341 SDNSNSDNSTSDNSN--PDNLTSDNPNTDNSGSDNSSSGNFNSDNSTSDNSNSDNSTSDN 398

Query: 426 LPSHHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
             S ++ SD      ++ ++S   +S   NS+
Sbjct: 399 SSSDNSNSDNSYTDNSTSDNSKKDKSNPNNSN 430



 Score = 32.7 bits (71), Expect = 0.70
 Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 2/152 (1%)

Query: 319 DDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNE-PDSDVNVTDSPNRGKRIGVRF 377
           D+S +D   T     + +S+  + ++   T+N   +N  P++  +   + N   +     
Sbjct: 267 DNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNS 326

Query: 378 RSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVG 437
             S  P+N    +S+ D +N  N           +SD   + ++ S    S +  SD   
Sbjct: 327 DDSK-PDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGSDNSSSGNFNSDNST 385

Query: 438 QTTNSEESSYCSQSEGGNSDVGFHYAADSSWD 469
              ++ ++S    S   NS+    Y  +S+ D
Sbjct: 386 SDNSNSDNSTSDNSSSDNSNSDNSYTDNSTSD 417



 Score = 30.7 bits (66), Expect = 2.8
 Identities = 30/182 (16%), Positives = 72/182 (39%), Gaps = 5/182 (2%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           S N    N  ++ +  D+S +D   +     + ++T  + ++   ++N    N    + N
Sbjct: 50  SENSNSYNSTSDNSTSDNSTSDNSNSDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSN 109

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
             +S +           +   +N  + +S+ D +N  + +        S+SD   + ++ 
Sbjct: 110 TDNSTSNNSN-----PENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTDNSN 164

Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGN 482
           S    S ++  D +    ++ ++S    S  GN +     + +S+ D     + TSD   
Sbjct: 165 SDNSTSDNSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNST 224

Query: 483 RE 484
            +
Sbjct: 225 SD 226



 Score = 30.3 bits (65), Expect = 3.7
 Identities = 32/180 (17%), Positives = 74/180 (41%), Gaps = 11/180 (6%)

Query: 311 ERNEVTAKDDSANDVDKTPIDKVEENSTT------TAKANVLKTENDEKSNEPDSDVNVT 364
           ++N   +  +++N  + T  +   +NST+       + ++   T+N    N    + +  
Sbjct: 42  KKNPDNSTSENSNSYNSTSDNSTSDNSTSDNSNSDNSNSDNSNTDNSNSDNSSSDNSSSD 101

Query: 365 DSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSI 424
           +S +          ++  PEN  +++S+ + +N  N          S+++   S ++ + 
Sbjct: 102 NSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTD 161

Query: 425 ALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSDTGNRE 484
              S ++ SD       + ++S    S   NS  G   + +S+ D     + TSD  N +
Sbjct: 162 NSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSSSGNFNSDNSTSD-----NSTSDNSNSD 216


>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1888

 Score = 37.5 bits (83), Expect = 0.024
 Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           S N+  S+  N+  + +D+ +D DKT  +    ++ TT+  +     N    N+P SD +
Sbjct: 85  SDNETTSD--NDTNSDNDTTSDNDKTSDNDTTSDNDTTSDNDTTSDNNTTSYNDPTSDND 142

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
            T   +          +    +N  N  +D    N K       T   ++SD + ++   
Sbjct: 143 TTSDNDTTSDNDTTSDNETTSDNDTNSDNDTTSDNDKTTDNDTTTDNDTTSDNDTTSDNN 202

Query: 423 SIALPSHHTMSDWVGQTTNSEESS 446
           + +   + T SD   +T+N+  +S
Sbjct: 203 TTSY--NDTTSD-NNKTSNNNTTS 223



 Score = 35.1 bits (77), Expect = 0.13
 Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 5/171 (2%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           +N  N+ T+ +D   D D T  +    ++ TT+  N     +    N   S+ N T   +
Sbjct: 167 TNSDNDTTSDNDKTTDNDTTTDNDTTSDNDTTSDNNTTSYNDTTSDNNKTSNNNTTSDND 226

Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
                   F +    +N  N+++D+D  +  +     +T   + +      ++ +    S
Sbjct: 227 TTSDNDTTFDNDTTTDN--NKTTDNDTTSDNDTTTDNDTTSDNDTTTNNDTNSDNDTTTS 284

Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSSWDPFALLDPTSD 479
           + T SD     T S+  +  +     ++D        ++ D  +  D TSD
Sbjct: 285 NDTTSD---NDTTSDNDTTTNNDTTSDNDATSDNDTTTNNDTTSDNDATSD 332


>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 36.3 bits (80), Expect = 0.057
 Identities = 29/165 (17%), Positives = 65/165 (39%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           S +   S+  N  ++   S++    +       +S++++ ++   + +   S+   S  +
Sbjct: 80  SSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 139

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
            + S +          SS    +  + SS    ++  +      +  +SSS    S+S+ 
Sbjct: 140 SSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 199

Query: 423 SIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
           S +  S  + S     ++NS  SS  S S   +S      ++ SS
Sbjct: 200 SSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSNNSSSSSSS 244



 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/90 (24%), Positives = 38/90 (42%)

Query: 378 RSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVG 437
           RSS    N  N SS    ++  +      +  +SSS    ++S+ S +  S  + S    
Sbjct: 50  RSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSS 109

Query: 438 QTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
            +++S  SS  S S   +S      ++ SS
Sbjct: 110 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 139



 Score = 30.3 bits (65), Expect = 3.7
 Identities = 24/132 (18%), Positives = 54/132 (40%)

Query: 336 NSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDF 395
           ++++++ ++   + +   S+   S  + + S +          SS    +  + SS    
Sbjct: 59  SNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSS 118

Query: 396 ANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGN 455
           ++  +      +  +SSS    S+S+ S +  S  + S     ++NS  SS  S S   +
Sbjct: 119 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSS 178

Query: 456 SDVGFHYAADSS 467
           S      ++ SS
Sbjct: 179 SSSSSSSSSSSS 190


>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1211

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 326 DKTPIDKVEEN-STTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPE 384
           DKT + K      TT A    ++T+    S +P+  V ++  P +   I V   ++ +PE
Sbjct: 364 DKTAVPKTTTAPETTDASKTTVETQQTTYSRDPEISVTISTQPKKAPGITVAPETTVVPE 423

Query: 385 -NVRNESSDDDFANVKNKQKKIETFQTSSSD 414
             V +E++ +       +    E F T+ S+
Sbjct: 424 TTVASETTAETHQTTYPRDPLPEMFVTTQSN 454


>SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79)
          Length = 632

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%)

Query: 306 KIVSNERNEV---TAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           ++V+ E +++   TAK+     +   PI + E N+T T KAN  + E  E++N     +N
Sbjct: 169 QVVTKEDHQLHLETAKEFLEEIISNLPIKREENNNTDTHKANT-QMEQPEQAN-----IN 222

Query: 363 VTDSPNR-GKRIGVRFRSSWIPENVRNESSD--DDFANVKN 400
            + SP R  K I    RS  IP+    E  +  DD   V+N
Sbjct: 223 KSKSPARIAKPIKGGIRSPPIPKAFETEFPELRDDDNEVQN 263


>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 576

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 9/114 (7%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           S E N+    DD  ++ D    DK  E       AN +K+E D +   P     +   P 
Sbjct: 465 SEEANDDNNNDDGDDNYDVDGDDK-NEMEEDNGGANDVKSEEDSEIEVP-----IKTKPA 518

Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
           + K+   + +S    E+   ESSDD     K+K+ K      S S+ E S  AP
Sbjct: 519 KSKK-AFKLKSDDSSED--EESSDDGPRGSKSKKHKKRCVSDSDSELEDSPVAP 569


>SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9)
          Length = 564

 Score = 33.5 bits (73), Expect = 0.40
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 304 GNKIVSNERNEVTAKDDSANDVDKT-PIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           GN++ +++ NEV   DD   D D    +D  ++N    A  + +  ++D++ +  D DV
Sbjct: 135 GNEVDADDDNEVDDDDDDEVDTDDDGEVDADDDNKVNAADDDEMDADDDDEVDADDDDV 193



 Score = 32.3 bits (70), Expect = 0.92
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVT 364
           N++  ++ NEV A DD  N VD T  D V  N+    + N    +N   + + D++VN T
Sbjct: 266 NEVDDDDDNEVNAADD--NVVDATDDDNV-VNADDDDEVNA-ADDNVVDATDDDNEVNAT 321

Query: 365 DSPN 368
           D  N
Sbjct: 322 DDDN 325



 Score = 31.1 bits (67), Expect = 2.1
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 304 GNKIVSNERNEVTAKDDSANDV--DKTPIDKVEENSTTTAKANVLKTEND-EKSNEPDSD 360
           GN++ + + NEV A DD   D   D   +D  ++N       + + T++D E   + D+ 
Sbjct: 110 GNEVDAADGNEVDADDDDEVDAADDGNEVDADDDNEVDDDDDDEVDTDDDGEVDADDDNK 169

Query: 361 VNVTD 365
           VN  D
Sbjct: 170 VNAAD 174


>SB_59527| Best HMM Match : DUF382 (HMM E-Value=4.1e-26)
          Length = 800

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 317 AKDDSANDVDKTPIDKVEENSTTTAKAN-VLKTENDEKSNEPDSDVNVT-DSPNRGKRIG 374
           A++DS      +  D +EE S  TA    V   EN       +S  ++T D P  G    
Sbjct: 86  AEEDSPKTDSSSSSDTIEEQSGVTAPTEEVQSVENVLTKTVGESPPSITVDEPRSGGESS 145

Query: 375 VRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGE 416
           V   S    E V NE    D    +   ++ E+ QTSS +GE
Sbjct: 146 VVQTSVGEFELVDNEEVATDAVLEQMVAQQNESRQTSSQEGE 187


>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
          Length = 654

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 4/132 (3%)

Query: 318 KDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRF 377
           +DDS+++ ++ P  K ++    T  A    +  D+ S++ + + +   + ++ K+   + 
Sbjct: 2   EDDSSDEEEEKPKKKADDKVKKT-PAKQESSSEDDSSDDDEEEKSKKKAVSKEKKTPAKQ 60

Query: 378 RSSWIPENVRNESSDDDFANVKNKQK---KIETFQTSSSDGECSASAPSIALPSHHTMSD 434
            SS    +  + S +D     K+K K   K +  + SSS    S   P    P    +S 
Sbjct: 61  ESSSDDSSSDDSSDEDTKMPTKSKLKNGTKTKAKEESSSSDSSSEDEPPAKRPKSAKVSK 120

Query: 435 WVGQTTNSEESS 446
            V  +T +  +S
Sbjct: 121 PVASSTPAVTAS 132


>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
          Length = 1338

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 323 NDVDKTPIDKV---EENSTTTAKANVL---KTENDEKSNEPDSDVNVTDSPNRGKRIGVR 376
           +D D  P+ KV   EE      K   L   K  N+  +  PDS+ + +   ++   +  R
Sbjct: 732 DDPDAPPVKKVKVEEEKDLEDIKIEKLLGGKCPNETPAAAPDSEGSTSADADKFCSMNGR 791

Query: 377 FRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPSHHT 431
                  E V    S+ +     N Q       TSSS  EC ++      P  HT
Sbjct: 792 IEEQQPQEGVEENKSESENNQKDNSQSSSPNGSTSSSKDECESTKEK---PEKHT 843


>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1122

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 4/97 (4%)

Query: 306 KIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTD 365
           +++ +E  +V   +D+ +D DK     ++EN+    K +V    N EK NE ++  + + 
Sbjct: 319 RVLRDEDGDVYNHEDTIDDGDKED-GNIDENADGFHKNDVENRSNAEKGNENENHCDGSY 377

Query: 366 SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQ 402
           +     +IG  F+ S   EN  ++  D     V++K+
Sbjct: 378 ATKDDAKIG-DFKGS--DENYNHDDVDGTTKTVESKE 411


>SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 653

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 2/153 (1%)

Query: 303 SGNKIVSNE-RNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           SG     NE R E    DD+ ++ D    D V++        +V    +    ++ D + 
Sbjct: 249 SGGNNGDNELRGEAGDYDDADDEHDVVVDDDVDDEHDVVVDDDVDDEHDVVVDDDVDDEH 308

Query: 362 NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
           +V    +    +   F  S IP   R E  +D+  + K+   K +  +  +SD     ++
Sbjct: 309 DVVVDDDVDDDVECAFGGSTIPYPKR-EFLNDENNDTKSNASKTQQGKQENSDQNGQPNS 367

Query: 422 PSIALPSHHTMSDWVGQTTNSEESSYCSQSEGG 454
             I   S H    +  Q    ++ S+  Q++ G
Sbjct: 368 KRIRALSAHQPDQFQKQQQQQQQQSFAFQTQNG 400


>SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 639

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 315 VTAKDDSANDVDKT-PIDKVEENSTTTAKANVLKT-ENDEKSNEPDSDVNVTDSPNRGKR 372
           V+     A + DK+ P++K ++ +   A    L   E D++ N P S   V D+P+ G +
Sbjct: 312 VSCNPSIAKEHDKSMPLEKPQQTTQDAASRTKLAAREGDKERNSPSS---VPDTPSDGGK 368

Query: 373 IGVRFRSSWIPENVRNESSDDDFANV 398
               F +    E V  E+ DD+  N+
Sbjct: 369 EMEDFSTKKKMECVEGETVDDNLTNL 394


>SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4)
          Length = 692

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 296 KILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVE--ENSTTTAKANVLKTENDEK 353
           KI  +    +  + N+ + VT  ++ A+D D+   D VE  EN    A  +    ++D+ 
Sbjct: 409 KIFSSTYECHLQIPNDLHVVTFVEELASDEDEFNEDDVEYIENLAKKAADHFDDEDDDDD 468

Query: 354 SNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNE---SSDDDFANVKNKQKKIETFQT 410
             E   +   T          + F+++ +    RN    +S  +  N + KQ+  E F T
Sbjct: 469 DEETPLEEYTTSIDGENMDEYIAFKTTLLALQSRNPEWYASMMNGLNNEQKQELHEVFTT 528

Query: 411 SSSDGECSASAP 422
           +      +ASAP
Sbjct: 529 ADQKAAAAASAP 540


>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
          Length = 282

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           S E  E  AKD    DV K P+     NS  +    V K E D  S+E +S+    +   
Sbjct: 113 SEEEEEEAAKDIKKPDVQKRPL---AVNSDKSPPKKVAKVEKDSDSDEEESEEEGMELDK 169

Query: 369 RGKRIG---VRFRSSWIPENVRNESSDDD 394
             + I      F+ +   +     SSD+D
Sbjct: 170 VKQNIYQSLFEFKGNLFDKEAEEASSDED 198


>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
          Length = 758

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 36/147 (24%), Positives = 53/147 (36%), Gaps = 11/147 (7%)

Query: 312 RNEVTAKDDSANDVDKTPIDKVEEN--STTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
           R E  AK+ + +D      D   EN  +TTTAK++V   E    +N      NVT+ P  
Sbjct: 128 RGEKLAKEGNVDDALSKGRDSASENRHTTTTAKSSVTGEERGSSTNHKGE--NVTEQPKE 185

Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIET--FQTSSSDGECSASAPSIALP 427
                +   S+ IP              ++       T   Q+ S     S S  +    
Sbjct: 186 ----ELEMPSAEIPPGGSTVKGSSSHVEIEQDSTTASTSRLQSDSDLNSKSLSELTDVQD 241

Query: 428 SHHTMSDWVGQTTNSE-ESSYCSQSEG 453
           + H  SD  G    S+ E  +    EG
Sbjct: 242 TQHIDSDSTGVKDKSQIEEEFYDTEEG 268


>SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35)
          Length = 430

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 2/133 (1%)

Query: 297 ILQARLSGNKIVSNERNEVTAKDDSANDV-DKTPIDKVEENSTTTAKANVLKTENDEKSN 355
           ++Q + S  K+  N R++  +K     D  D  P+   EE      KA  +K      ++
Sbjct: 266 MVQTKKSNLKVKLNMRHQAKSKKRKHTDKEDIDPLAYYEEVKMKKMKAKEMKEMTARLAH 325

Query: 356 EPDSDVNVTDSPNRGKR-IGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSD 414
           EP+   +  D+   GKR I  +   +      + +   +    +K K  K    + S   
Sbjct: 326 EPEYQADEEDNGEGGKRAITYKISKNKGLTARKKKRGGNPRVKLKKKYSKAVIKRKSQIS 385

Query: 415 GECSASAPSIALP 427
           GE SA+      P
Sbjct: 386 GEISANFSHFVCP 398


>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 218

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 303 SGNKIVSNERNEVTAKDDSA-NDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           + NK   N+ N+    DD+  N  DK   D   EN+      N    +ND+K+++ D + 
Sbjct: 83  NNNKTNDNDTNDENINDDNEKNTNDKNNNDDSNENTNDDNDKNT-NDDNDKKNDDKDKNT 141

Query: 362 N 362
           N
Sbjct: 142 N 142



 Score = 30.7 bits (66), Expect = 2.8
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVT 364
           NK ++++ +  T  +D   + D T  D  + N+            NDE  N+ D++ N  
Sbjct: 48  NKHINDDNDNKTNNNDKDTNDDNTNEDNDKNNNDDNNNKTNDNDTNDENIND-DNEKNTN 106

Query: 365 DSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSD 414
           D  N           +   +N +N + D+D  N    +   + F  +++D
Sbjct: 107 DKNNNDDS-----NENTNDDNDKNTNDDNDKKNDDKDKNTNDDFDDNTTD 151


>SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5)
          Length = 873

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/77 (22%), Positives = 40/77 (51%), Gaps = 6/77 (7%)

Query: 333 VEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRG----KRIGVRFRSSWIPENVRN 388
           V+ +S+      + K  +  K +  D++  + DS N      KR+  R +S+WI +   +
Sbjct: 383 VKASSSCDGSVKIWKMVDQNKISSIDANDAMVDSDNDSLVATKRL--RVKSAWIDDEADD 440

Query: 389 ESSDDDFANVKNKQKKI 405
           +  DD+F +++  ++++
Sbjct: 441 DDEDDEFKDIRKLKEQL 457


>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
          Length = 557

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 9/123 (7%)

Query: 309 SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           +N  ++    DD  ++ D    D  +EN       ++ + +N+EK ++ D D +  D  +
Sbjct: 339 NNSCDDEDYDDDDVHNDDSENDD--DENDDDDDDDDISREDNEEKESDGDDDGD--DDDD 394

Query: 369 RGKRIGVRFRSSWIPENVRNESSDDD-----FANVKNKQKKIETFQTSSSDGECSASAPS 423
               +  R  +   P  V +E SDDD     F  VK K+K          D   +  A +
Sbjct: 395 NDDDVDGREAARETPRPVDDEGSDDDDVIGGFFKVKAKKKNKVHDMLQERDCSLATEAGT 454

Query: 424 IAL 426
           + L
Sbjct: 455 VGL 457


>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 14/161 (8%)

Query: 299 QARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPD 358
           +A+  G      ERN+ +  ++  +D       +VEE    + + N+     DE+S E +
Sbjct: 187 KAKEEGKAEKEAERNDSSEDENKDSDAKAAQTKEVEEEEVRSNRGNL-----DEQSTEAN 241

Query: 359 SDV-NVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGEC 417
           +    V +   R  R  +  +S+    N  +  SDD   +  + +K  +T     SD + 
Sbjct: 242 AQTKEVEEEEVRSNRGNLDEQSTEANGNNTDTHSDDSEKDSDDDEKSADTKNDEISDSDK 301

Query: 418 SASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSDV 458
           S +            SD     + + ES Y S SE  + DV
Sbjct: 302 SDT-------EKDADSDSENDGSGTSESEYLS-SEESDEDV 334


>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 929

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 23/109 (21%), Positives = 40/109 (36%)

Query: 315 VTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIG 374
           V  KDDS  D D+    + EE+     K   L  E+ ++      D+N  D+        
Sbjct: 286 VQKKDDSVKDEDEEEESEQEEDKDEEKKVKYLTYESSDEQMYDTDDLNDDDTRGEYDDYE 345

Query: 375 VRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPS 423
              R          ES  +D    ++K ++     TS +  + + +  S
Sbjct: 346 EMLRKQMEEAETPTESESEDEEKPEHKPREDSEDVTSRTSSDFTLATES 394


>SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 450

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDV 361
           +  + ++ ++ ++V    D  ND D   ID V+ N      ++V+  +ND+ +N+ DSDV
Sbjct: 160 IDDDDVIDDDDSDVIDHVDVINDDDSDVIDDVDVNDD--GDSDVID-DNDDVNNDDDSDV 216


>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
          Length = 1841

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 308  VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSP 367
            V N RN     DD  +D      +K  +    +        EN+ ++N   +    T + 
Sbjct: 1531 VQNNRNNNNDDDDDDDDERNNNSNKTMDYDNNSNDGVDDNNENESRNNNDANKQQQTPAA 1590

Query: 368  NRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDG 415
                R G R +++    N  N+  DDD     N  K ++ +  +S+DG
Sbjct: 1591 TAQTRQG-RVQNN---RNNNNDEDDDDDERNNNSNKTMD-YDNNSNDG 1633


>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 608

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 294 RVKILQARLSGNKIVSNERNEVTA--KDDSANDVDKTPI--DKVEENSTTTAKANVLKT- 348
           + K  + +   NK  + E  + T   KD + N+ DKT    DK +EN   T K N  KT 
Sbjct: 393 KTKNKKDKTKNNKDKTKENKDKTKENKDKTKNNKDKTKENKDKTKENKDKT-KENKDKTK 451

Query: 349 ENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENV-RNESSDDDFANVKNKQKK 404
           EN +K+ E            +  +   +       EN  + + + D   N K+K K+
Sbjct: 452 ENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKNNKDKTKE 508


>SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091)
          Length = 497

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 326 DKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPEN 385
           D +  D  ++ + +    +V K ++ +K N+  S  NV D  + GK  G       I E 
Sbjct: 294 DSSEEDSAKDKNDSVTNGDVNKEDDKDKENQDVSKENVNDKADDGKEDG----KGTIAEL 349

Query: 386 VRNESSDDDFANVKNKQ---KKIETFQTSSSDGECSASAPSIALPS 428
            +    +D     +NK    KK E    +  D +       + LP+
Sbjct: 350 DKKGEKEDGMKMQENKLRLFKKAERQVDNRCDSKAFCPTAEVVLPT 395


>SB_52671| Best HMM Match : SPAN-X (HMM E-Value=2.6)
          Length = 172

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 347 KTENDEKSNEPDSDVN-VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKI 405
           K++  +K  + DS  + V    N G       RSS    + R  S      +   +++  
Sbjct: 16  KSKRSKKKKKKDSSKSCVRKESNSGSDTACEERSSKKSHSRRGTSRSTKGRSSSGQEENS 75

Query: 406 ETFQTSSSDGECSASAPSIALPSHHTMS 433
             F+TSS+DG  ++S+    +  H T S
Sbjct: 76  TDFRTSSTDGRSTSSSAENFISPHCTNS 103


>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1680

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 5/106 (4%)

Query: 320 DSANDVDKTP--IDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRF 377
           D  ND ++    +D V +    T     L    D+  N+ ++   V D    G  I V  
Sbjct: 116 DEKNDKEELDAFLDSVSQPRGDTRMDRALNLAKDQLMNDENTREGVEDMD--GATIAVLG 173

Query: 378 RSSWIPE-NVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
              ++ +  +R  +SD D A + +    +  F   +SD  CSA  P
Sbjct: 174 VGGYVDKFEMRQVASDPDHAFLVSNYDDLMQFVKLASDAVCSAKPP 219


>SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)
          Length = 309

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/62 (24%), Positives = 32/62 (51%)

Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVT 364
           N IV+   N+  +  D+ ND D    ++ + +S +  + + +   ++E  N+ D+D N  
Sbjct: 17  NDIVNENDNDNDSDSDNENDDDNDSDNENDNDSDSDNENDNVNDSDNETDNDNDNDNNNN 76

Query: 365 DS 366
           D+
Sbjct: 77  DN 78


>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 473

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 21/138 (15%), Positives = 57/138 (41%)

Query: 303 SGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVN 362
           S N   ++  N+    + + ++VD    +  E+N + +   N     N+  + + ++  N
Sbjct: 306 SNNNDNNSNNNDFNNSNRNDHNVDNNSHNNDEKNKSNSNDNNDENNNNNSNNKDSNNKSN 365

Query: 363 VTDSPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAP 422
             D+ +          +     ++RN+++  + +N K+++   +   T++     +A+  
Sbjct: 366 NNDNKSNSNNTENNSNNDGFDNSIRNDNNAGNKSNNKDEKNNSKGTTTTTKTITTTATTT 425

Query: 423 SIALPSHHTMSDWVGQTT 440
           +I      T +     TT
Sbjct: 426 TITTAMATTKTITAATTT 443


>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 950

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 21/95 (22%), Positives = 43/95 (45%)

Query: 319 DDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFR 378
           D+  N  +KT   K+EE    T K    + E++E+S E   +   T+  N+         
Sbjct: 618 DEDNNIKNKTTAKKIEEPLPRTKKPEKEEEESEEESEEESEEEEETEKVNKDALKAKATE 677

Query: 379 SSWIPENVRNESSDDDFANVKNKQKKIETFQTSSS 413
            S     +  E S+++ +  ++++ + E  + S+S
Sbjct: 678 KSNDSLCLSEEESEEEESEEESEEDEEEGAKPSAS 712


>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
          Length = 641

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 10/71 (14%)

Query: 313 NEVTAKDDSANDVDKTP--------IDKVE--ENSTTTAKANVLKTENDEKSNEPDSDVN 362
           +E T + D + + D TP        +++ E  E+S    +AN L     E ++ PD  + 
Sbjct: 296 HEATDEPDRSQEADDTPDRPQKEADVEEAEEAEDSDELDEANELPNRTQESTDTPDKPLE 355

Query: 363 VTDSPNRGKRI 373
            T +P R +R+
Sbjct: 356 STHAPERPQRL 366



 Score = 29.5 bits (63), Expect = 6.5
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTA--KANVLKTENDEKSNEPDSDVNVTDSPNR 369
           E T   D   +V  TP    E N       + N     + E +N PD    VTDSP+R
Sbjct: 117 ETTDVPDRPQEVTTTPDRPQEANDAPDRPQETNDAPERSHEVTNTPDKPQEVTDSPDR 174



 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTEND---EKSNEPDSDVNVTDSPNRG 370
           EVT   D   + D  P D+ +E +  + ++     E D   E ++EPD     TD P R 
Sbjct: 167 EVTDSPDRLQEEDDAP-DRPQEATDESDRSQEATDEPDRSHEATDEPDRPQETTDVPGRS 225

Query: 371 KRI 373
           + +
Sbjct: 226 QEV 228


>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3934

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 309  SNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
            S+ER+++ AK +   +   +  + +EE ST  ++   L++    + +    ++   +   
Sbjct: 3144 SDERDDLKAKLEETEETLASTKENLEETSTKLSETEKLRSSEVSERDSSIEELRTNNENL 3203

Query: 369  RG--KRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASA 421
            RG  KR    FR + I  +   E        ++    K++  +  + D    A A
Sbjct: 3204 RGDLKRTKESFREACIENSDLREKLSVTEEKLERVDAKLQELENDNVDALAEAQA 3258


>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
          Length = 1199

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 10/129 (7%)

Query: 301 RLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEE--NSTTTAKANVLKTENDEKSNEPD 358
           + +G++    E+N+VT  + S     + P+  V +  N+  + K   +    +    E D
Sbjct: 489 KCTGDRSDKKEKNDVTG-EPSPGPSTRLPLSHVTDYNNNKVSEKKCSISQNTNTVEREQD 547

Query: 359 SDVNVT--DSPNR-GK----RIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTS 411
           ++V     +SP+  GK    RI V    S  P+     S+  DF       K+  +  + 
Sbjct: 548 AEVMSAFENSPSPDGKVDETRISVSEPGSPYPQRNAKLSAVSDFYRPVTPIKRSPSTSSV 607

Query: 412 SSDGECSAS 420
           +S+GEC +S
Sbjct: 608 NSEGECKSS 616


>SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08)
          Length = 696

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 9/55 (16%)

Query: 308 VSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTEN--DEKSNEPDSD 360
           +S  +N +  +DDS +D+        E N++TT + N +KT+N  DE+ N+P +D
Sbjct: 22  LSARQNNIL-EDDSQSDITS------EINTSTTEQNNKIKTQNHDDEEKNDPLND 69


>SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55)
          Length = 607

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 305 NKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNE 356
           NK+ +   N+VT K   AN+V     DKV  N T     NV     +E +N+
Sbjct: 7   NKVANKVTNKVTNK--VANNVTNKVTDKVTRNVTNKVTNNVTNKVTNEVTNK 56


>SB_49242| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 367

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 320 DSANDVDKTPI---DKVEENSTTTAKANVLKTEN-DEKSNEPDSDVNVTDSPN 368
           D +N  DKT +     V + S  T K+N++   N  +K+N  D   NVTD  N
Sbjct: 2   DKSNVTDKTNVTDGSNVTDRSNVTDKSNMMDKSNVTDKTNVTDGS-NVTDKSN 53


>SB_8603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 70

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 8/45 (17%)

Query: 318 KDDSANDVDKTPIDKVEENSTTTAKANVLKTEN--DEKSNEPDSD 360
           +DDS +D+        E N++TT + N +KT+N  DE+ N+P +D
Sbjct: 6   EDDSQSDITS------EINTSTTEQNNKIKTQNHDDEEKNDPLND 44


>SB_19950| Best HMM Match : AIP3 (HMM E-Value=1.7)
          Length = 427

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 314 EVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRI 373
           EV+AK D++    K P++ +EE +    K      E  + S + D  + ++  P +    
Sbjct: 316 EVSAKLDASTSQGKVPVEALEELTCQDKKRGTYSLE--DVSEKLDEVLAISPRPEKRGTY 373

Query: 374 GVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSS 412
           G+   S  + E+ ++    DD +   +    I T++ SS
Sbjct: 374 GLEDVSKKLDESGQSTKVLDDISRAFS-NPDISTYRDSS 411


>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
          Length = 682

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 2/159 (1%)

Query: 311 ERNEVTAKDDSANDVD--KTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPN 368
           E+ E     + A D+D  KT +D+     +       +  E  ++SN  + +  ++    
Sbjct: 416 EQLESVQSQEEAMDLDEKKTVVDQRALIESQAGNQVAMNVEVKQESNGNEEEERISKVEV 475

Query: 369 RGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECSASAPSIALPS 428
           + +++G         + + + +S     N  +K   + TF  S    +   S PS +  +
Sbjct: 476 KVEKVGEVEILEKNDKAILSGNSKTTTCNASDKNSSVITFTPSDEGSKVVPSVPSDSDSN 535

Query: 429 HHTMSDWVGQTTNSEESSYCSQSEGGNSDVGFHYAADSS 467
             +    V      E  +  S  E   +DV     A ++
Sbjct: 536 VQSSKTVVSTVLEVESKNVSSTEESSKADVNITVGASTT 574


>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3213

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 347  KTENDEKSNEPDSDVNVTD---SPNRGKRIGVRFRSSWIPENVRNESSDDDFANVKNKQK 403
            K E D+ S      V  TD   SPNR   +G   RSS +P  V   +S DD     +  +
Sbjct: 2952 KIETDQISPMSLDKVYATDQHSSPNRAPSLGKMARSSTLPNPVITVTSFDD---EDDYDE 3008

Query: 404  KIETFQTSSSDGECSA 419
             +  +    SDGE SA
Sbjct: 3009 NVNDY--DDSDGEISA 3022


>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
          Length = 220

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 336 NSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNRGKRIGVRFRSSWIPENVRNESSDDDF 395
           NS+ +  + V + E+DE +N  ++D    D P R  ++    R   + + +R +  + + 
Sbjct: 114 NSSDSGNSEVTEQEHDEDANSEEND----DKPTRKTKLDKAQRK--LNKRLRQKKKNKNV 167

Query: 396 ANVKNKQKKIE 406
           AN +  ++K++
Sbjct: 168 ANGEENERKVK 178


>SB_3273| Best HMM Match : Neuromodulin (HMM E-Value=1.9)
          Length = 457

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 12/95 (12%)

Query: 310 NERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEKSNEPDSDVNVTDSPNR 369
           +ER   T K DS    D+T  D   +N+ TTA        +D+  +EP    + T SP  
Sbjct: 332 SERYRKTTKKDSELQTDETTKDTQRQNTDTTA--------SDKTDDEPTVSSHDT-SPRT 382

Query: 370 GKRIGVRFRSSWIPENVRNESSDDDFANVKNKQKK 404
            K  G+   S++ P+    E  D+ ++ + + +++
Sbjct: 383 QKETGLTGLSNF-PDG--TEEEDEAYSTMPSSERE 414


>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
          Length = 1313

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 398  VKNKQKKIETFQTSSSDGECSASAPSIALPSHHTMSDWVGQTTNSEESSYCSQSEGGNSD 457
            V+ K K  E  +TSS+ G           P+    S     +++S  SSY S S  G+S 
Sbjct: 978  VRRKDKDKEK-RTSSTRGRSPTRKDKKDKPARRQSSSSSSSSSSSGSSSYSSSSSTGSSS 1036

Query: 458  VGFHYAADSS 467
             G   ++ SS
Sbjct: 1037 SGSSRSSSSS 1046


>SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 225

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 294 RVKILQARLSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTENDEK 353
           R K  + R SGN  +S+ RN+   K  S+ +++ +     ++   ++   N+    N++ 
Sbjct: 61  RNKYDKQRSSGNMNISSNRNKYD-KQRSSGNMNISSNRNNDDKQRSSGNMNISSNRNNDD 119

Query: 354 SNEPDSDVNVTDSPNRGKR 372
                 ++N++ + N+  +
Sbjct: 120 KQRSSGNMNISSNRNKNDK 138


>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
          Length = 144

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 3/119 (2%)

Query: 302 LSGNKIVSNERNEVTAKDDSANDVDKTPIDKVEENSTTTAKANVLKTE-NDEKSNEPDSD 360
           L+ + + S++     +  D++N  D +  DK++ +++ + K N   ++ N+  S+  +SD
Sbjct: 23  LNSDNLNSDKLKSDNSNSDNSNS-DNSNSDKLKSDNSNSEKLNSNNSDSNNSNSDNSNSD 81

Query: 361 VNVTDSPNRGKRIGVRFR-SSWIPENVRNESSDDDFANVKNKQKKIETFQTSSSDGECS 418
            + +D+ N  K   V     +   + ++  +S+ D  N  N          S+SD   S
Sbjct: 82  NSNSDNSNSDKLKLVNSNPDNSNSDKLKLVNSNSDKLNSDNSNSDNSNSDNSNSDNSNS 140


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.313    0.128    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,836,796
Number of Sequences: 59808
Number of extensions: 583305
Number of successful extensions: 2012
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1908
Number of HSP's gapped (non-prelim): 113
length of query: 495
length of database: 16,821,457
effective HSP length: 85
effective length of query: 410
effective length of database: 11,737,777
effective search space: 4812488570
effective search space used: 4812488570
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 62 (29.1 bits)

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