Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40009
(876 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q54Y76 Cluster: Repressor of RNA polymerase III transcr... 37 0.77
UniRef50_Q54EL0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q24I84 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q54GX3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_Q24GS5 Cluster: Putative uncharacterized protein; n=1; ... 35 3.1
UniRef50_Q16HG9 Cluster: Putative uncharacterized protein; n=1; ... 35 3.1
UniRef50_Q54XW5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q1ZXA7 Cluster: G-protein-coupled receptor (GPCR) famil... 33 7.2
UniRef50_Q8IIW4 Cluster: Putative uncharacterized protein; n=8; ... 33 9.5
UniRef50_Q54VT5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q24D11 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q23BN3 Cluster: Glycosyl hydrolases family 38 protein; ... 33 9.5
UniRef50_Q6FVF0 Cluster: Candida glabrata strain CBS138 chromoso... 33 9.5
>UniRef50_Q54Y76 Cluster: Repressor of RNA polymerase III
transcription; n=1; Dictyostelium discoideum AX4|Rep:
Repressor of RNA polymerase III transcription -
Dictyostelium discoideum AX4
Length = 278
Score = 36.7 bits (81), Expect = 0.77
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 9 DRNGNTGMSSNNLDGNQQQLNAQVNNPS--QNVEIKGCFPSSTETSRLNHLYNLQ 167
+ N N+G SSNN + N L+ +N+PS N+ + P S TSR +Y +Q
Sbjct: 77 NNNSNSG-SSNNNNNNNNTLSVSMNSPSPTSNISVSPFGPMSNSTSRKTMIYLIQ 130
>UniRef50_Q54EL0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1137
Score = 35.9 bits (79), Expect = 1.4
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Frame = +3
Query: 15 NGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPS-STETSRL------NHLYNL--Q 167
N T +SNN + N+ N++ ++ S+ P ++ SR+ NHL NL
Sbjct: 52 NNTTTTTSNNNNSNKNTSNSKNSHLSEKSSNSNSIPQIQSQDSRIFNTFTKNHLNNLINN 111
Query: 168 QHLRDCQRNIXXXXXXXXXXYQRLHHRPQIIIR 266
QH +C NI Q HH P II+
Sbjct: 112 QHNNNCYNNITAGHYQQQQQQQPPHHHPVSIIK 144
>UniRef50_Q24I84 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 374
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +3
Query: 21 NTGMSSNNLDGNQQQLNAQ-VNNPS--QNVEIKGCFPSSTETSRLNHLYNLQQHLRDC 185
N+G+++ NL+GN QQ Q + N Q ++K FP +T L +++ LQQ L C
Sbjct: 44 NSGLNNVNLEGNNQQKQEQKLENILLLQEFKMKYLFPCTTVDVNLKYIHQLQQLLVQC 101
>UniRef50_Q54GX3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 826
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 9 DRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYNLQQH 173
+ +GN ++NN + N N NN S N ++K ++ S++N+L ++ Q+
Sbjct: 82 NNSGNNNNNNNNNNNNNNNNNNNNNNSSSNEQVKNSDSNTIYKSKINYLVSISQN 136
>UniRef50_Q24GS5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 671
Score = 34.7 bits (76), Expect = 3.1
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +3
Query: 6 VDRNGNTGMSSNNL----DGNQQQLNAQVNNPSQNVEI---KGCFPSSTETS-RLNHLYN 161
+ +NG NL + N Q N Q NNPSQN+ I F SS + ++ ++Y
Sbjct: 588 IQQNGQQQFVQQNLMPNGEYNLPQQNYQNNNPSQNISIYQTNRQFISSNDVQIQMQNIYQ 647
Query: 162 LQQHLRDCQRNI 197
Q++L+ QRNI
Sbjct: 648 NQENLQRQQRNI 659
>UniRef50_Q16HG9 Cluster: Putative uncharacterized protein; n=1; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 1048
Score = 34.7 bits (76), Expect = 3.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 245 SSSNYHQVTGYAHTESNPNPGTSQASQVKVEPEN 346
SSSN + + +S P+P TSQ S +K EP N
Sbjct: 924 SSSNCSSASSSFYQQSQPHPATSQTSSIKSEPNN 957
>UniRef50_Q54XW5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 701
Score = 34.3 bits (75), Expect = 4.1
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 9 DRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYNLQQHLRDCQ 188
+ N N ++NN + N N NN + N ++T T+ L N+ ++ ++C
Sbjct: 27 NNNNNNNSNNNNNNNNNNNNNNNNNNNNDNKTTTTTTTTTTTTTNLKETQNINENAKECG 86
Query: 189 RN 194
N
Sbjct: 87 EN 88
>UniRef50_Q1ZXA7 Cluster: G-protein-coupled receptor (GPCR) family
protein; n=5; Dictyostelium discoideum|Rep:
G-protein-coupled receptor (GPCR) family protein -
Dictyostelium discoideum AX4
Length = 511
Score = 33.5 bits (73), Expect = 7.2
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 15 NGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYNLQ 167
N N ++NN + N N NN S ++EI G S+ T R+N NLQ
Sbjct: 461 NNNNNNNNNNNNNNNNNNNNNNNNNSSSLEISG-VESNNSTPRVNSPDNLQ 510
>UniRef50_Q8IIW4 Cluster: Putative uncharacterized protein; n=8;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3371
Score = 33.1 bits (72), Expect = 9.5
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +3
Query: 9 DRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYNLQQHLRD 182
+ N N ++NN++ N + + NN + V++K + S +N++YN+ + D
Sbjct: 878 NNNNNNNSNNNNINLNDLNIISSTNNFNLPVDLKNIYMKENR-SNVNNIYNINNSIND 934
>UniRef50_Q54VT5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 868
Score = 33.1 bits (72), Expect = 9.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 3 VVDRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFP 122
+ D N N ++NN + N N NN + N+ IKG P
Sbjct: 196 IADNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIHIKGEHP 235
>UniRef50_Q24D11 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1482
Score = 33.1 bits (72), Expect = 9.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 DRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYNLQ-QHLRDC 185
+R N NNL+ NQQQ + + N+ QN+ + S N+ N+Q QH
Sbjct: 250 ERTNNYVYEENNLNKNQQQKHMRSNSLQQNMYQNNMKIQGSVYSNSNNTNNIQYQHQNSA 309
Query: 186 QRN 194
Q+N
Sbjct: 310 QQN 312
>UniRef50_Q23BN3 Cluster: Glycosyl hydrolases family 38 protein;
n=1; Tetrahymena thermophila SB210|Rep: Glycosyl
hydrolases family 38 protein - Tetrahymena thermophila
SB210
Length = 1047
Score = 33.1 bits (72), Expect = 9.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 161 FATTFKGLSKKHFIT*WPPRWILSTSSPSSSNYHQVTG 274
F T GL + I + P W LS + PSS NY+ V G
Sbjct: 776 FYTDSNGLELQKRILNYRPTWNLSVNEPSSGNYYPVNG 813
>UniRef50_Q6FVF0 Cluster: Candida glabrata strain CBS138 chromosome
E complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome E complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 357
Score = 33.1 bits (72), Expect = 9.5
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 394 TTRSQTRSTRDKTNYSD-QN*ATQFKSTTKFRCYSKD*ECNTSRMSCDADNETVAGNTSP 570
T T ST D + S+ + +T+ ST++ YS+ +++ D++ + TS
Sbjct: 54 TEEPSTSSTSDNSESSETEGSSTEITSTSESSIYSESVTASSTTSDTDSETSSTTSYTSY 113
Query: 571 QPSTSAKSVQTI 606
PST++ SV I
Sbjct: 114 TPSTTSVSVGPI 125
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,496,225
Number of Sequences: 1657284
Number of extensions: 18460578
Number of successful extensions: 80530
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 47983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71633
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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