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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30034
         (699 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu...   146   6e-34
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma...   121   1e-26
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R...   109   6e-23
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc...    88   2e-16
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa...    77   6e-13
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo...    74   3e-12
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell...    73   7e-12
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu...    73   9e-12
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/...    55   2e-06
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa...    55   2e-06
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge...    54   3e-06
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve...    53   6e-06
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ...    51   2e-05
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ...    50   5e-05
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|...    48   2e-04
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter...    48   2e-04
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter...    47   4e-04
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or...    46   7e-04
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ...    46   9e-04
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul...    45   0.002
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n...    45   0.002
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina...    44   0.004
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu...    44   0.005
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu...    44   0.005
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis...    43   0.006
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter...    42   0.015
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ...    42   0.019
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu...    40   0.044
UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati...    38   0.18 
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung...    38   0.18 
UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick...    37   0.41 
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater...    37   0.41 
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ...    37   0.55 
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol...    36   0.72 
UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ...    36   0.72 
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya...    36   0.96 
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ...    36   1.3  
UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639...    36   1.3  
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;...    36   1.3  
UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=...    34   2.9  
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;...    34   2.9  
UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=...    34   3.9  
UniRef50_UPI0001552E13 Cluster: PREDICTED: hypothetical protein;...    33   5.1  
UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus...    33   6.7  
UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps...    33   6.7  
UniRef50_Q01BM3 Cluster: Chromosome 04 contig 1, DNA sequence; n...    33   6.7  
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ...    33   8.9  
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl...    33   8.9  

>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
           organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
           (Human)
          Length = 151

 Score =  146 bits (353), Expect = 6e-34
 Identities = 69/88 (78%), Positives = 75/88 (85%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3   PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62

Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
           KADRDE+SPYAAMLAAQDVA++CK LGI
Sbjct: 63  KADRDESSPYAAMLAAQDVAQRCKELGI 90



 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 27/49 (55%), Positives = 28/49 (57%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIKLRA           GAQ          MKIGRIEDVTP+PSDST
Sbjct: 92  ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140


>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
           major|Rep: 40S ribosomal protein S14 - Leishmania major
          Length = 203

 Score =  121 bits (292), Expect = 1e-26
 Identities = 55/87 (63%), Positives = 68/87 (78%)
 Frame = -1

Query: 516 EKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVK 337
           +  +++K++     GP    G+ V+GV HIFASFNDTFVHVTD+SGRET  +VTGGMKVK
Sbjct: 6   QATRMSKKQEVKAYGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVK 65

Query: 336 ADRDEASPYAAMLAAQDVAEKCKTLGI 256
           ADRDE+SPYAAM+AAQDV  +CK  GI
Sbjct: 66  ADRDESSPYAAMMAAQDVVARCKECGI 92



 Score = 34.7 bits (76), Expect = 2.2
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 155 EDWPH*RCHPRTIRLDP*EGWP 90
           EDWPH  CHP   RL P +G+P
Sbjct: 127 EDWPHRGCHPDPDRLHPPQGFP 148


>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
           Ribosomal protein S14 - Palaemonetes pugio
          Length = 77

 Score =  109 bits (262), Expect = 6e-23
 Identities = 52/68 (76%), Positives = 55/68 (80%)
 Frame = -1

Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
           P K K  KEEVQV LGPQ   GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG KV
Sbjct: 3   PRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQKV 62

Query: 339 KADRDEAS 316
           KADRDE+S
Sbjct: 63  KADRDESS 70


>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
           Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
           Ostreococcus tauri
          Length = 243

 Score = 88.2 bits (209), Expect = 2e-16
 Identities = 40/48 (83%), Positives = 45/48 (93%)
 Frame = -1

Query: 399 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGI 256
           HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLAAQDVA +CK LGI
Sbjct: 90  HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGI 137



 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 24/36 (66%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = -1

Query: 504 VAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 400
           V+   V  T +GPQ   GE VFGVAHIFASFNDTFV
Sbjct: 9   VSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44



 Score = 41.9 bits (94), Expect = 0.015
 Identities = 23/49 (46%), Positives = 26/49 (53%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIK+RA           G Q          +KIGRIEDVTP P+DST
Sbjct: 139 ALHIKMRAKGGNKTKSPGPGGQSALRALSRSGIKIGRIEDVTPTPTDST 187


>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
           Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
           jannaschii
          Length = 129

 Score = 76.6 bits (180), Expect = 6e-13
 Identities = 34/63 (53%), Positives = 46/63 (73%)
 Frame = -1

Query: 444 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 265
           +G+ HI++S+N+T +H TD++G ETIARV+GG   +  RDE SPYAAM AA  +AE  K 
Sbjct: 9   WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68

Query: 264 LGI 256
            GI
Sbjct: 69  RGI 71



 Score = 39.1 bits (87), Expect = 0.10
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = -3

Query: 250 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           +HIK+RA           GAQ          ++IGRIEDVTPVP D T
Sbjct: 74  IHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121


>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
           Thermoprotei|Rep: 30S ribosomal protein S11P -
           Cenarchaeum symbiosum
          Length = 198

 Score = 74.1 bits (174), Expect = 3e-12
 Identities = 32/71 (45%), Positives = 49/71 (69%)
 Frame = -1

Query: 471 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 292
           P+    +   G+AHI++S+N+T +H+TDL+G ET++  +GG+ V ADR E+SP+AAM AA
Sbjct: 66  PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAA 125

Query: 291 QDVAEKCKTLG 259
             V E  +  G
Sbjct: 126 NKVIESARAKG 136



 Score = 35.1 bits (77), Expect = 1.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 247 HIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           HI++RA           GAQ           +IGRI+DVTP+P D+T
Sbjct: 141 HIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187


>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
           natans|Rep: Ribosomal protein S14 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 145

 Score = 72.9 bits (171), Expect = 7e-12
 Identities = 31/64 (48%), Positives = 45/64 (70%)
 Frame = -1

Query: 447 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 268
           +FG+ HI ++ NDT +HVTD++G ETI+R++ G+     +D+ S Y AMLA Q V+  CK
Sbjct: 11  LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70

Query: 267 TLGI 256
            LGI
Sbjct: 71  VLGI 74



 Score = 35.9 bits (79), Expect = 0.96
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = -3

Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ALHIK+RA           GA            KIGRIED TP P++ T
Sbjct: 76  ALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTPTPTNGT 124


>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
           euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
           uncultured euryarchaeote ARMAN-2
          Length = 169

 Score = 72.5 bits (170), Expect = 9e-12
 Identities = 36/63 (57%), Positives = 44/63 (69%)
 Frame = -1

Query: 444 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 265
           + VAH+++S NDT + +TDLSG ETIA  +GGM V AD  E SPYAAM AA  VA + K 
Sbjct: 46  WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKE 105

Query: 264 LGI 256
            GI
Sbjct: 106 KGI 108



 Score = 33.1 bits (72), Expect = 6.7
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 250 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
           ++I++RA           GAQ          +++ RIEDVTP+P+D+T
Sbjct: 111 INIEIRAPGGHGSKTPGHGAQAVVRVLARSGLRVNRIEDVTPIPTDTT 158


>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
           Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
           Homo sapiens (Human)
          Length = 157

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
           KCE+A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35  KCESAFLSKRNPRQINWTVLYRRKHKKGQSE 65


>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
           Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 157

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
           KCE+A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35  KCESAFLSKRNPRQINWTVLYRRKHKKGQSE 65


>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_246, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 182

 Score = 54.4 bits (125), Expect = 3e-06
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -1

Query: 375 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGI 256
           ET+ R TGGMK K D +E+SP AAM AAQDV+++CK L I
Sbjct: 50  ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDI 89


>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 143

 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
           +CE A LMRRNPR+VTWTVLYR K KKG +E
Sbjct: 15  RCERALLMRRNPREVTWTVLYRCKHKKGTQE 45


>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 104

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -1

Query: 375 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGI 256
           ET+ R TGGMK KAD +E+SP AAM AAQDV+++ K L I
Sbjct: 29  ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDI 68


>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 332

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = -1

Query: 360 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK 268
           V GGMK+KAD DE+SPYAAML +QDVA  CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241


>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
           melanogaster|Rep: RH14088p - Drosophila melanogaster
           (Fruit fly)
          Length = 123

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +2

Query: 572 MRRNPRKVTWTVLYRRKFKKGQEE 643
           M+RNPRKVTWTVLYRRK +KG EE
Sbjct: 1   MKRNPRKVTWTVLYRRKHRKGIEE 24


>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
           Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
           pomeroyi
          Length = 130

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 23/63 (36%), Positives = 38/63 (60%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           GVAH+ ++FN+T + ++D+ G        G M  K  R +++PYAA LAA+D   K +  
Sbjct: 20  GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDH 78

Query: 261 GIR 253
           G++
Sbjct: 79  GVK 81


>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
           Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
           mutans
          Length = 127

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 38/63 (60%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           G+AHI A+FN+T V +TD+ G        G +  K  R +++P+AA +AA+  A+  +  
Sbjct: 17  GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75

Query: 261 GIR 253
           G++
Sbjct: 76  GLK 78


>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
           organisms|Rep: Ribosomal protein S11 - Chlorokybus
           atmophyticus (Soil alga)
          Length = 262

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           GVAHI  + N+T + +TDL G       +G +  K  R + S YAA  AA+  A+K   L
Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQL 210

Query: 261 GIRPCT 244
           GI+  T
Sbjct: 211 GIKDVT 216


>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
           Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
           S14 - Homo sapiens (Human)
          Length = 350

 Score = 46.0 bits (104), Expect = 9e-04
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = -1

Query: 348 MKVKADRDEASPYAAMLAAQDVAEKCKTLGI 256
           MK +AD+DE+SP  AML AQDV ++CK LGI
Sbjct: 1   MKEQADQDESSPCTAMLTAQDVVQRCKELGI 31


>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
           organisms|Rep: 30S ribosomal protein S11 - Shewanella
           oneidensis
          Length = 130

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 22/63 (34%), Positives = 36/63 (57%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           G+AHI ASFN+T V +TD  G       +GG   +  R +++P+AA +AA+      +  
Sbjct: 20  GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDY 78

Query: 261 GIR 253
           G++
Sbjct: 79  GLK 81


>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
           Rattus norvegicus
          Length = 119

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
 Frame = -1

Query: 483 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVK 337
           ++L PQ + G+ V GV +IFASF D+F++ TD+ G+  T   VT  MK +
Sbjct: 5   LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ 54


>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
           Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
           nodorum (Septoria nodorum)
          Length = 161

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
           K E+  L R+NPRK++WT LYRR  KKG  E
Sbjct: 35  KTESLFLQRKNPRKISWTTLYRRMHKKGISE 65


>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
           organisms|Rep: 30S ribosomal protein S11 - Polaromonas
           sp. (strain JS666 / ATCC BAA-500)
          Length = 134

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           G+AH+ ASFN+T + +TD  G       +GG   K  R +++P+AA +A++         
Sbjct: 24  GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQ 82

Query: 261 GIR 253
           GI+
Sbjct: 83  GIK 85


>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
           organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
           bacterium (strain Ellin345)
          Length = 142

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 23/63 (36%), Positives = 36/63 (57%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           G+AHI ASFN+T V ++D SG     + +G +  +  R + +P+AA  AA   A   +  
Sbjct: 32  GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDH 90

Query: 261 GIR 253
           G+R
Sbjct: 91  GMR 93


>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
           vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
           Victivallis vadensis ATCC BAA-548
          Length = 148

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 23/63 (36%), Positives = 37/63 (58%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           G+A++ A+FN+T V  TDL G   I   TGG        +++ YAA + A D A+K + +
Sbjct: 38  GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLV 96

Query: 261 GIR 253
           G++
Sbjct: 97  GMK 99


>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
           Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
           pulmonis
          Length = 136

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           GVAHI ++ N+T V  +D  G       +G +  K  + + + YAA LAAQ+ +EK K  
Sbjct: 21  GVAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTA-YAAGLAAQNASEKAKEH 79

Query: 261 GIR 253
           GIR
Sbjct: 80  GIR 82


>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
           oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
           Oenococcus oeni ATCC BAA-1163
          Length = 113

 Score = 41.5 bits (93), Expect = 0.019
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAE 277
           GVAHI ++FN+T V +TD +G        G +  K  R +++P+AA LA +  A+
Sbjct: 22  GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAK 75


>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
           organisms|Rep: 30S ribosomal protein S11 - Bacillus
           subtilis
          Length = 131

 Score = 40.3 bits (90), Expect = 0.044
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAE 277
           G+AHI ++FN+T V +TD  G        G +  +  R +++P+AA +AA+  A+
Sbjct: 21  GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAK 74


>UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative;
           n=19; Spermatophyta|Rep: Small subunit ribosomal
           protein, putative - Oryza sativa subsp. japonica (Rice)
          Length = 366

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 432 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIR 253
           H+    N TFV VTD+ G +      G ++ +  R   S YAA   A+ V    + +G++
Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307


>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
           Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 155

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 503 TLFFSGPWLSL*LES*KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
           TLF  G       ++ K  +    R+NPR++ WTVL+R+  KKG  E
Sbjct: 19  TLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITE 65


>UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1;
           Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
           protein S11 - Neorickettsia sennetsu (strain Miyayama)
          Length = 120

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 19/65 (29%), Positives = 35/65 (53%)
 Frame = -1

Query: 447 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 268
           V G AH+  +FN+ ++ VTD  G       +G +  K ++ +++ YAA   A  +  K K
Sbjct: 8   VSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKLK 66

Query: 267 TLGIR 253
            +G++
Sbjct: 67  RIGLK 71


>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
           Bilateria|Rep: 60S ribosomal protein L24 -
           Caenorhabditis elegans
          Length = 159

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +2

Query: 572 MRRNPRKVTWTVLYRRKFKKG 634
           +RRNPR + WTVLYR K KKG
Sbjct: 42  LRRNPRDIRWTVLYRIKNKKG 62


>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
           n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
           protein S11 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 138

 Score = 36.7 bits (81), Expect = 0.55
 Identities = 21/50 (42%), Positives = 27/50 (54%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 292
           GV H+ ASFN+T V VTD+ GR       G    +  R   +P+AA  AA
Sbjct: 28  GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTAA 76


>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
           genome shotgun sequence; n=3; cellular organisms|Rep:
           Chromosome undetermined SCAF14706, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 215

 Score = 36.3 bits (80), Expect = 0.72
 Identities = 18/61 (29%), Positives = 35/61 (57%)
 Frame = -1

Query: 438 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 259
           +AH+ A++N+T + VTD +G+ ++ R + G +   +  +++P AA  A    A K    G
Sbjct: 106 IAHVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKG 164

Query: 258 I 256
           +
Sbjct: 165 V 165


>UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29;
           Magnoliophyta|Rep: Small subunit ribosomal protein -
           Berberis thunbergii (Japanese barberry)
          Length = 150

 Score = 36.3 bits (80), Expect = 0.72
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 438 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 259
           + H+    N+TFV VTD  G +      G ++        S YAA   A+ V    + LG
Sbjct: 46  LVHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLG 105

Query: 258 IR 253
           ++
Sbjct: 106 MK 107


>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
           Euryarchaeota|Rep: 50S ribosomal protein L24e -
           Methanococcus jannaschii
          Length = 70

 Score = 35.9 bits (79), Expect = 0.96
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLY---RRKFKKGQE 640
           KCE ++ M RNPRK+ WT +Y   + + KK QE
Sbjct: 36  KCEKSYRMGRNPRKLKWTKVYQDMKAELKKAQE 68


>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
           Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
           protein L24 - Entamoeba histolytica HM-1:IMSS
          Length = 163

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 569 LMRRNPRKVTWTVLYRRKFKKGQE 640
           L + NPRKV WT +YR+  KKGQ+
Sbjct: 43  LRKTNPRKVFWTAIYRQLNKKGQQ 66


>UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639;
           n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
           protein PH1639 - Pyrococcus horikoshii
          Length = 102

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +1

Query: 274 FLCYILCR---QHSSVG*RFITVSLHLHATSDTGDSFPAG*ISNMNECVI 414
           F C+  C    +H  +G R I VS + H T+ +   F  G ISN+N  VI
Sbjct: 51  FQCFFCCSPSSKHCCIGGRLIPVSFNYHTTAPSAYRFRTGDISNVNNGVI 100


>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
           Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
           Epifagus virginiana (Beechdrops)
          Length = 136

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 292
           GV H+  SFN+T V VTD+ GR       G    K  R   + +AA +AA
Sbjct: 28  GVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIAA 76


>UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1;
           Prototheca wickerhamii|Rep: Mitochondrial ribosomal
           protein S11 - Prototheca wickerhamii
          Length = 128

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = -1

Query: 441 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 262
           G+ HI ++ N+T + +TDL G        G +  K  R +++ YA+  AA+ +A K    
Sbjct: 18  GIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSR-KSTVYASGAAAEALASKAFNE 76

Query: 261 GIR 253
           G R
Sbjct: 77  GYR 79


>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
           cellular organisms|Rep: Ribosome biogenesis protein
           rlp24 - Schizosaccharomyces pombe (Fission yeast)
          Length = 192

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKK 631
           KC     M+RNPRKV WT  YR+   K
Sbjct: 35  KCHKNFKMKRNPRKVAWTKAYRKAHGK 61


>UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2;
           Arabidopsis thaliana|Rep: 30S ribosomal protein S11,
           putative - Arabidopsis thaliana (Mouse-ear cress)
          Length = 235

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = -1

Query: 453 ETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEK 274
           ET   + HI    N+TFV VTD  G       +G +       + + Y A   A+++  +
Sbjct: 111 ETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRR 170

Query: 273 CKTLGIR 253
            K +G++
Sbjct: 171 AKAMGLK 177


>UniRef50_UPI0001552E13 Cluster: PREDICTED: hypothetical protein;
           n=2; Fungi/Metazoa group|Rep: PREDICTED: hypothetical
           protein - Mus musculus
          Length = 196

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 27/119 (22%), Positives = 52/119 (43%)
 Frame = +2

Query: 149 NLHT*TSKSPKCRLSTRTRGLCFVSTSSTELYVQGLMPRVLHFSATSCAANIAA*GDASS 328
           ++ T T+ S     S+ +  +C  ST+S+              S+++C+ +  +    SS
Sbjct: 24  SISTSTTSSTSTSTSSTSSSICSTSTTSST--------STSSTSSSTCSTSTTSSTSTSS 75

Query: 329 RSAFTFMPPVTRAIVSRPDKSVT*TNVSLNEAKMCATPNTVSPTKCWGPRVTWTSSLAT 505
            S+ T     T +I S    S + T+ S   +   ++ +T +PT       + TSS +T
Sbjct: 76  TSSSTCSTSTTSSITSSTSTSTSSTSTSSTSSTSTSSTSTSTPTPSTSTSTSTTSSTST 134


>UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus
           marinus|Rep: Predicted protein - Prochlorococcus marinus
          Length = 58

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 185 CTSGSCSFKYEDWPH*RCHPRTIRLD 108
           C++ SCSF Y+DW H R H   +  D
Sbjct: 4   CSNRSCSFPYDDWHHCRIHRSKVTND 29


>UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11
           - Ostreococcus tauri
          Length = 121

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -1

Query: 429 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKC 271
           I  + N+TFV++TDL G       +G +  K  + ++S YAA    + V + C
Sbjct: 15  ISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSK-KSSSYAAQSTTEKVLQFC 66


>UniRef50_Q01BM3 Cluster: Chromosome 04 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 484

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 23/82 (28%), Positives = 44/82 (53%)
 Frame = -1

Query: 456 GETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAE 277
           G++++G+A    + ++  VH  +L  R +I  +   ++V  D D+AS YA  + A+  A 
Sbjct: 155 GDSIYGIARAHGTTSERLVHANELGVRRSI-EIGQVLRVPVDIDKAS-YA--VKAKFHAT 210

Query: 276 KCKTLGIRPCT*SSVLLVETKQ 211
              +LG  P +  S+L   +K+
Sbjct: 211 NAASLGTTPASSRSLLAPLSKR 232


>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 202

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYR 616
           KC     M+RNPRKV WT  YR
Sbjct: 73  KCHKNFKMKRNPRKVKWTKAYR 94


>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
           ATCC 50803
          Length = 189

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 551 KCEAAHLMRRNPRKVTWTVLYR 616
           KC     M+RNPRKV WT  YR
Sbjct: 36  KCHRNFKMKRNPRKVRWTKTYR 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,832,608
Number of Sequences: 1657284
Number of extensions: 13836722
Number of successful extensions: 31581
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 30204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31570
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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