Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10385
         (811 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00003C0E84 Cluster: PREDICTED: similar to c-Jun prot...    37   0.69 
UniRef50_UPI00015B6440 Cluster: PREDICTED: similar to GA15338-PA...    36   0.91 
UniRef50_Q17F82 Cluster: Jun; n=2; Culicidae|Rep: Jun - Aedes ae...    36   1.6  
UniRef50_A5KB13 Cluster: Guanidine nucleotide exchange factor, p...    36   1.6  
UniRef50_Q8CAT9 Cluster: 16 days neonate thymus cDNA, RIKEN full...    34   4.9  
UniRef50_P18289 Cluster: Transcription factor AP-1; n=2; Sophoph...    34   4.9  
UniRef50_Q0TSA7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_P50083 Cluster: Putative uncharacterized protein YGR226...    33   6.4  
UniRef50_UPI0001553292 Cluster: PREDICTED: hypothetical protein;...    33   8.5  
UniRef50_A3DNK1 Cluster: Dihydrolipoamide dehydrogenase; n=1; St...    33   8.5  

>UniRef50_UPI00003C0E84 Cluster: PREDICTED: similar to c-Jun
           protein; n=1; Apis mellifera|Rep: PREDICTED: similar to
           c-Jun protein - Apis mellifera
          Length = 264

 Score = 36.7 bits (81), Expect = 0.69
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = +1

Query: 1   MVVKLRDHVHRLKEQVLEHANGGCHI 78
           +V +L++HV RLKEQV++H + GC I
Sbjct: 232 VVHRLKEHVCRLKEQVMDHVHSGCQI 257


>UniRef50_UPI00015B6440 Cluster: PREDICTED: similar to GA15338-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA15338-PA - Nasonia vitripennis
          Length = 271

 Score = 36.3 bits (80), Expect = 0.91
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   MVVKLRDHVHRLKEQVLEHANGGCHI 78
           ++ KL++ + RLKEQV++H N GC I
Sbjct: 239 VINKLKESISRLKEQVIDHVNSGCQI 264


>UniRef50_Q17F82 Cluster: Jun; n=2; Culicidae|Rep: Jun - Aedes
           aegypti (Yellowfever mosquito)
          Length = 279

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   MVVKLRDHVHRLKEQVLEHANGGCHI 78
           +V  L+ HV +LK+QV++HAN GC I
Sbjct: 248 IVFNLKQHVIQLKQQVVDHANSGCTI 273


>UniRef50_A5KB13 Cluster: Guanidine nucleotide exchange factor,
            putative; n=1; Plasmodium vivax|Rep: Guanidine nucleotide
            exchange factor, putative - Plasmodium vivax
          Length = 2237

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 163  SLCMLRPSGRD*HGMWRSGDGDAIR-SATRCGSHHSHALGPAPLACARGPLVSPP 2
            SL   RP G      W++ D +A    A  CG+    A+  APLA    PLV PP
Sbjct: 1370 SLARCRPGG----ATWKAADCEAAECGAAECGAPERGAVEGAPLAVESSPLVGPP 1420


>UniRef50_Q8CAT9 Cluster: 16 days neonate thymus cDNA, RIKEN
           full-length enriched library, clone:A130052M04
           product:hypothetical protein, full insert sequence; n=3;
           Murinae|Rep: 16 days neonate thymus cDNA, RIKEN
           full-length enriched library, clone:A130052M04
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 148

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 9   ETKGPRAQAKGAGPRACEWWLPHRVALLIASPSP 110
           E +  RA  + AG   C W LPH VA L A+P P
Sbjct: 67  EARTLRAAPQAAGRGHCLWLLPHSVARLAAAPPP 100


>UniRef50_P18289 Cluster: Transcription factor AP-1; n=2;
           Sophophora|Rep: Transcription factor AP-1 - Drosophila
           melanogaster (Fruit fly)
          Length = 289

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 1   MVVKLRDHVHRLKEQVLEHANGGCHI 78
           +V  L+DHV +LK+QV+EH   GC +
Sbjct: 257 IVKNLKDHVAQLKQQVMEHIAAGCTV 282


>UniRef50_Q0TSA7 Cluster: Putative uncharacterized protein; n=1;
           Clostridium perfringens ATCC 13124|Rep: Putative
           uncharacterized protein - Clostridium perfringens
           (strain ATCC 13124 / NCTC 8237 / Type A)
          Length = 229

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 18/54 (33%), Positives = 32/54 (59%)
 Frame = +2

Query: 509 NLATSFTD*TRLMRRCQFYVFPRFNDIAVLLCCICFAIVYCVAIFINRLLILII 670
           N A    D  R +R+ +   FP+F DI+++L  I F+IV   ++F++ + I+ I
Sbjct: 51  NRAKYSLDLLRKLRKLEDVDFPKFKDISMVLLGILFSIVTYTSLFLDSIGIIDI 104


>UniRef50_P50083 Cluster: Putative uncharacterized protein YGR226C;
           n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein YGR226C - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 199

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 243 FFNVATLTPYTLGFINYILHSKIKITNRFVCCVLAGATSMECGG-AAMATR 94
           F+N+ ++ P  L FINY L    +  N  V  ++A   +ME G   A++TR
Sbjct: 10  FYNIRSINPTLLNFINYFLLIVPQFINLIVSSLVATQIAMELGEITALSTR 60


>UniRef50_UPI0001553292 Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 90

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 6   GETKGPRAQAKGAGPRACEWWLPHRVALLIASPSP 110
           G   GPRA  +GAG +A   WLP  VA L+    P
Sbjct: 21  GVGPGPRAAHRGAGAQAQRSWLPKEVASLLGRGPP 55


>UniRef50_A3DNK1 Cluster: Dihydrolipoamide dehydrogenase; n=1;
           Staphylothermus marinus F1|Rep: Dihydrolipoamide
           dehydrogenase - Staphylothermus marinus (strain ATCC
           43588 / DSM 3639 / F1)
          Length = 451

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -1

Query: 700 DVQITAKMRFYY*N*ESIYKNSY----TIDNGKTNATKENSNIIETGKYVKLATSHQPR 536
           D+ +T K RF       IY+N++    TI+N K  A   N+N+IET K + +A   +P+
Sbjct: 201 DISLTMK-RFLREKNVKIYENTFVEKITIENNKVKAKLSNNNLIETDK-ILVAIGRKPK 257


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,537,355
Number of Sequences: 1657284
Number of extensions: 12683695
Number of successful extensions: 34655
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34633
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)