Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30083
         (851 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55750 Cluster: PREDICTED: similar to CG11791-PA...    50   6e-05
UniRef50_UPI000050FADA Cluster: COG0611: Thiamine monophosphate ...    35   2.3  
UniRef50_A2I896 Cluster: AAEL000054-PA; n=1; Aedes aegypti|Rep: ...    35   2.3  
UniRef50_Q5TTR8 Cluster: ENSANGP00000026493; n=3; Culicidae|Rep:...    34   5.2  
UniRef50_A2ESX6 Cluster: Surface antigen BspA-like; n=1; Trichom...    33   6.9  
UniRef50_Q4KB31 Cluster: Putative uncharacterized protein; n=1; ...    33   9.1  
UniRef50_A7PXR4 Cluster: Chromosome chr15 scaffold_37, whole gen...    33   9.1  

>UniRef50_UPI0000D55750 Cluster: PREDICTED: similar to CG11791-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG11791-PA, isoform A - Tribolium castaneum
          Length = 137

 Score = 50.4 bits (115), Expect = 6e-05
 Identities = 44/121 (36%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
 Frame = +3

Query: 339 KLRKREEHSASVHPAEVXXXXXXXXXXXXX-------------FRXXXXXXXXXXXXXXX 479
           KLRKREEHS SVHPA+V                          +R               
Sbjct: 17  KLRKREEHSNSVHPADVVLHQTTPAAATQTPTAPQALQPDPLAYRGQFLWQYPPPPPQPY 76

Query: 480 VYPHDQDNLISRTATSVP-VSAVFARISVVVGND**KRRPEQEVYTIPAELKPTNLKQIY 656
           +Y +DQD L+    T  P     F +          KR+P  EVYTIPAELKP  LKQIY
Sbjct: 77  MYNNDQDTLVQNLPTERPGFVRGFRKNLGGRWRRLVKRKPPTEVYTIPAELKP-QLKQIY 135

Query: 657 V 659
           V
Sbjct: 136 V 136


>UniRef50_UPI000050FADA Cluster: COG0611: Thiamine monophosphate
           kinase; n=1; Brevibacterium linens BL2|Rep: COG0611:
           Thiamine monophosphate kinase - Brevibacterium linens
           BL2
          Length = 362

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +1

Query: 160 LFAPIAVEAMKCKEE-NCEVGVV---LERNSLIVLSLTRPSSASAGGIGTIPSSAG 315
           LFA I  EA +  E   CE+ ++   L  + LIV+++T   +    G GT  SSAG
Sbjct: 106 LFAGIVAEAARAGEALGCEIPIIGGDLSSSGLIVVAITALGTVGGSGTGTAASSAG 161


>UniRef50_A2I896 Cluster: AAEL000054-PA; n=1; Aedes aegypti|Rep:
           AAEL000054-PA - Aedes aegypti (Yellowfever mosquito)
          Length = 3489

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 26/80 (32%), Positives = 41/80 (51%)
 Frame = +1

Query: 250 LSLTRPSSASAGGIGTIPSSAGKSHRYASASCVRGRSTLLPYILLKYSKLRLRRNRILLH 429
           L L +PS+ S+    + P S  +S   ASAS + G+S +L    L+++   L  N + L 
Sbjct: 209 LKLVKPSALSSTSSSSSPLSNAESSNLASASSIFGKS-ILRQPRLQFTTSLLNSNPLALA 267

Query: 430 FASSPCGSFRRRCLRLSSIL 489
            A++  GS      +LSS L
Sbjct: 268 AAAASSGSSLASTPKLSSSL 287


>UniRef50_Q5TTR8 Cluster: ENSANGP00000026493; n=3; Culicidae|Rep:
           ENSANGP00000026493 - Anopheles gambiae str. PEST
          Length = 74

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +2

Query: 521 NERASFRSLRKNIRGRWKRLVKKKA*TGSLHDPG*AQANKLKADIRFI 664
           NE+  F+ L++ + GR+KRLV +KA     H+P      +LK  ++ I
Sbjct: 29  NEKTGFKGLKRQLSGRFKRLVSRKA-----HEPAPVIPPELKPQLKTI 71


>UniRef50_A2ESX6 Cluster: Surface antigen BspA-like; n=1;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 1639

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = +1

Query: 196 KEENCEVGVVLERNSLIVLSLTRPSSASAGGIGTIPSSAGKSHRYASASCVRGRSTLLP 372
           K+ +C + V ++  S I++S +  S  S+    T+PS     ++YA ++C+R  S  +P
Sbjct: 820 KDYSCIIFVEIQSESTIIISNSAFSGCSSLSQITLPSGLTSINQYAFSNCIRINSISIP 878


>UniRef50_Q4KB31 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas fluorescens Pf-5|Rep: Putative
           uncharacterized protein - Pseudomonas fluorescens
           (strain Pf-5 / ATCC BAA-477)
          Length = 349

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +1

Query: 37  QAVK*STPENVVVWRSAPKRA--LSSRCLQSAQKRV*CPRFSMLFAPIAVEAMKCK 198
           Q+++    EN +VW  APKR   L    LQS  KRV     +M  A IA EA + K
Sbjct: 185 QSMQPCETENTLVWEIAPKRTAFLEQAVLQSPSKRVNYAFSAMNAAGIAGEAARLK 240


>UniRef50_A7PXR4 Cluster: Chromosome chr15 scaffold_37, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr15 scaffold_37, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 491

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 295 TIPSSAGKSHRYASASCVRGRSTLLPYILLKYSKLRLRRNRILLHFASSPC 447
           TI +S G  H + +    R  S +LPYILL    L LR +R+      +PC
Sbjct: 9   TIETSHGFGHEFENQ---RASSDILPYILLISELLALRSSRVAALLKENPC 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,601,299
Number of Sequences: 1657284
Number of extensions: 13646665
Number of successful extensions: 40933
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40894
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)