Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30068
         (572 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQR7 Cluster: Predicted intramitochondrial sorting pr...    85   1e-15
UniRef50_Q9V579 Cluster: Protein preli-like; n=4; Diptera|Rep: P...    71   2e-11
UniRef50_Q9Y255 Cluster: PRELI domain-containing protein 1, mito...    51   2e-05
UniRef50_UPI0000583FB0 Cluster: PREDICTED: similar to RIKEN cDNA...    48   2e-04
UniRef50_Q502C9 Cluster: Zgc:112317; n=2; Danio rerio|Rep: Zgc:1...    44   0.002
UniRef50_Q5AVQ4 Cluster: Putative uncharacterized protein; n=1; ...    38   0.22 
UniRef50_Q28P29 Cluster: AMP-dependent synthetase and ligase; n=...    33   4.8  
UniRef50_A4RA93 Cluster: Putative uncharacterized protein; n=2; ...    33   6.3  
UniRef50_A2GB97 Cluster: Putative uncharacterized protein; n=1; ...    32   8.3  

>UniRef50_Q1HQR7 Cluster: Predicted intramitochondrial sorting
           protein family member; n=4; Endopterygota|Rep: Predicted
           intramitochondrial sorting protein family member - Aedes
           aegypti (Yellowfever mosquito)
          Length = 213

 Score = 85.0 bits (201), Expect = 1e-15
 Identities = 38/59 (64%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
 Frame = +1

Query: 79  PGQTVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVLHSMYP-RPTSPAS 252
           P +T+A RSAWIDS VFGF+ AIRAFG+DRFKKNC + A+GFN+VL  M+P  P+S A+
Sbjct: 117 PSKTIATRSAWIDSSVFGFATAIRAFGLDRFKKNCMKTANGFNYVLQHMFPAHPSSLAA 175



 Score = 41.9 bits (94), Expect = 0.010
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 3   VTYTRNLGYTKVMSVVERVEYRYGRPGPDR 92
           VTYTRN+G+ K+MSVVE+V YR     P +
Sbjct: 90  VTYTRNIGFNKIMSVVEKVTYRSSPDNPSK 119


>UniRef50_Q9V579 Cluster: Protein preli-like; n=4; Diptera|Rep:
           Protein preli-like - Drosophila melanogaster (Fruit fly)
          Length = 236

 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = +1

Query: 82  GQTVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVLHSMYP 231
           G T+A R A+I SQVFGFSRAIRAFGI+RFK N ++ ++GFN+VL  M+P
Sbjct: 119 GSTLAVRRAYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVLRRMFP 168


>UniRef50_Q9Y255 Cluster: PRELI domain-containing protein 1,
           mitochondrial precursor; n=32; Eumetazoa|Rep: PRELI
           domain-containing protein 1, mitochondrial precursor -
           Homo sapiens (Human)
          Length = 219

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = +1

Query: 82  GQTVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVL 216
           G T  +R AW+ S +FG SRA++ FG+ RFK N ++   GF ++L
Sbjct: 122 GWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYIL 166


>UniRef50_UPI0000583FB0 Cluster: PREDICTED: similar to RIKEN cDNA
           2610524G07 gene; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to RIKEN cDNA 2610524G07 gene -
           Strongylocentrotus purpuratus
          Length = 204

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 16/47 (34%), Positives = 32/47 (68%)
 Frame = +1

Query: 88  TVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVLHSMY 228
           T  +R  W++S ++GFSRA+ AFG++R+K N ++   G  +++  ++
Sbjct: 122 TQLERHVWVNSSLYGFSRALMAFGVERYKANLTKSNKGIQYIVDKLF 168


>UniRef50_Q502C9 Cluster: Zgc:112317; n=2; Danio rerio|Rep:
           Zgc:112317 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 199

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 21/55 (38%), Positives = 29/55 (52%)
 Frame = +1

Query: 79  PGQTVAKRSAWIDSQVFGFSRAIRAFGIDRFKKNCSQMASGFNHVLHSMYPRPTS 243
           P  T   R AWI S VFG SR I+ FG+ RF+ N  +   G  H + ++    +S
Sbjct: 119 PVWTHITRQAWISSGVFGLSRPIQEFGLARFRSNQLKAMKGMEHAISNLQKASSS 173


>UniRef50_Q5AVQ4 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 798

 Score = 37.5 bits (83), Expect = 0.22
 Identities = 16/26 (61%), Positives = 16/26 (61%)
 Frame = +2

Query: 230 RGPRVPPPDGPISEGDARSGRRGHGP 307
           RGPR P P GP   G  RSGR G GP
Sbjct: 735 RGPRPPGPPGPYGPGPGRSGRPGPGP 760


>UniRef50_Q28P29 Cluster: AMP-dependent synthetase and ligase; n=2;
           Rhodobacteraceae|Rep: AMP-dependent synthetase and
           ligase - Jannaschia sp. (strain CCS1)
          Length = 904

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 201 PARHLRAVLLEPVDAECPYGSREAENLRVDPRRTLGHG 88
           P  HLRAV+L+  DA CP G+  +  L  +  R LG G
Sbjct: 292 PMEHLRAVILDQADAPCPPGT--SGQLHFEGPRMLGPG 327


>UniRef50_A4RA93 Cluster: Putative uncharacterized protein; n=2;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 996

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = -1

Query: 251 EAGLVGRGYM------LCRTWLNPLA-ICEQFFLNLSMPNARMAREKPKTCESIHAERLA 93
           E GLVG G +      L R  + P++  C    LNL  P A+   +KP T + +   R  
Sbjct: 488 ELGLVGAGPVVFDKDDLARIDIRPISSTCLPAALNLGNPEAKSFVDKPDTIQRLQQHRQL 547

Query: 92  TVWPGPAVPVLNSLN 48
              PG A P+   LN
Sbjct: 548 ICNPGTAQPLPIDLN 562


>UniRef50_A2GB97 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 184

 Score = 32.3 bits (70), Expect = 8.3
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +1

Query: 391 PGPDARQYAFEGSSMFTIPMEIVNIICESLLNFTTTTFVVC 513
           PG D   YA    S FT+P EI   ICE   +     F  C
Sbjct: 31  PGEDYPGYADSNYSGFTVPSEIPTRICEERKDINDENFTYC 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,067,939
Number of Sequences: 1657284
Number of extensions: 10919495
Number of successful extensions: 36984
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36956
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)