Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00025
(774 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog... 130 4e-29
UniRef50_O60739 Cluster: Eukaryotic translation initiation facto... 108 2e-22
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto... 106 5e-22
UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor... 90 7e-17
UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog... 82 1e-14
UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2... 78 3e-13
UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation facto... 78 3e-13
UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza sat... 74 5e-12
UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|R... 74 5e-12
UniRef50_Q00T99 Cluster: Translation initiation factor SUI1, put... 72 1e-11
UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15; ... 69 2e-10
UniRef50_Q6MVC9 Cluster: Probable translation initiation factor ... 64 5e-09
UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia scl... 60 6e-08
UniRef50_Q86AU4 Cluster: Similar to translation initiation facto... 58 2e-07
UniRef50_UPI000150A7AF Cluster: Translation initiation factor SU... 56 1e-06
UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, wh... 56 1e-06
UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations... 53 7e-06
UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating... 50 5e-05
UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;... 50 9e-05
UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n... 48 3e-04
UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1; G... 46 0.001
UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog... 43 0.007
UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 fami... 42 0.013
UniRef50_Q7R4J9 Cluster: GLP_49_44768_45085; n=1; Giardia lambli... 41 0.039
UniRef50_Q00YW3 Cluster: Density-regulated protein related to tr... 35 2.0
UniRef50_Q54CC3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|... 33 6.0
UniRef50_A1C8E3 Cluster: RNA binding protein Tma22, putative; n=... 33 6.0
UniRef50_Q9V1U3 Cluster: Protein translation factor SUI1 homolog... 33 7.9
>UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog;
n=11; Bilateria|Rep: Protein translation factor SUI1
homolog - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 130 bits (314), Expect = 4e-29
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
EYDLKKIVR+CKKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHG
Sbjct: 50 EYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHG 109
Query: 435 F 437
F
Sbjct: 110 F 110
Score = 93.1 bits (221), Expect = 7e-18
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSS 255
MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+
Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSA 49
>UniRef50_O60739 Cluster: Eukaryotic translation initiation factor
1b; n=44; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 1b - Homo sapiens (Human)
Length = 113
Score = 108 bits (259), Expect = 2e-22
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
+YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHG
Sbjct: 53 DYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHG 112
Query: 435 F 437
F
Sbjct: 113 F 113
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
1; n=53; Eukaryota|Rep: Eukaryotic translation
initiation factor 1 - Homo sapiens (Human)
Length = 113
Score = 106 bits (255), Expect = 5e-22
Identities = 45/61 (73%), Positives = 55/61 (90%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
+YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHG
Sbjct: 53 DYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHG 112
Query: 435 F 437
F
Sbjct: 113 F 113
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSN 258
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADD 53
>UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1 - Homo
sapiens
Length = 288
Score = 89.8 bits (213), Expect = 7e-17
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
+YD KK+V+A K FACNGTV+EHPEYGEV+Q QGDQ NICQ+L + GL K +QLKVH
Sbjct: 229 DYDKKKLVKAFKN-FACNGTVIEHPEYGEVIQPQGDQCNNICQFLVELGLAKDDQLKVHV 287
Query: 435 F 437
F
Sbjct: 288 F 288
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Frame = +1
Query: 70 SVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQ 243
+VS ++++ ++ + +IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQ
Sbjct: 166 AVSTEEKE-SYCKFAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQ 224
Query: 244 GLSSN 258
G++ +
Sbjct: 225 GIADD 229
>UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog 2;
n=42; Eukaryota|Rep: Protein translation factor SUI1
homolog 2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 82.2 bits (194), Expect = 1e-14
Identities = 34/61 (55%), Positives = 47/61 (77%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
EY KI++ KKEF CNGTVV+ E G+V+QLQGDQR+N+ +L ++GLVK + +K+HG
Sbjct: 53 EYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHG 112
Query: 435 F 437
F
Sbjct: 113 F 113
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
+ +Q FDPFADA VH+R+QQRNGRK+LTTVQGL
Sbjct: 4 LEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGL 50
>UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2;
Cryptosporidium|Rep: Translation initiation factor SUI1
- Cryptosporidium hominis
Length = 112
Score = 77.8 bits (183), Expect = 3e-13
Identities = 27/60 (45%), Positives = 47/60 (78%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
E+DLK++++A KK F+CNGT+++ PE+G +LQ+QGD R N+ ++L +V +++K+HG
Sbjct: 52 EFDLKRLLKAFKKNFSCNGTIIDDPEHGPILQIQGDHRHNVARFLVGENIVNSDEIKIHG 111
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1
Query: 139 PFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSNMT*RR 273
PF S G VH+R QQRNG+K+LTTVQGLS+ +R
Sbjct: 13 PFVVDALSEVGKSSSGYVHIRNQQRNGKKSLTTVQGLSAEFDLKR 57
>UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation factor
1; n=9; Apicomplexa|Rep: Eukaryotic translation
initiation factor 1 - Toxoplasma gondii
Length = 163
Score = 77.8 bits (183), Expect = 3e-13
Identities = 30/58 (51%), Positives = 46/58 (79%)
Frame = +3
Query: 261 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
DLKK+VRA KK+F+CNGTV+E PE+G ++QLQGDQR + ++L + + +Q+++HG
Sbjct: 105 DLKKMVRALKKQFSCNGTVIEDPEHGSIIQLQGDQRHAVKEFLEREAICSVDQIRIHG 162
Score = 39.9 bits (89), Expect = 0.069
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKS------SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSNM 261
+ IQN DPFA+ S + L ++R QQRNGRK++TTVQGL ++
Sbjct: 48 LDIQNFGVSDPFANDTSQAGGAGGSSTHLIRKLRNIRNQQRNGRKSVTTVQGLDKSL 104
>UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza
sativa|Rep: OSJNBa0089N06.3 protein - Oryza sativa
(Rice)
Length = 580
Score = 73.7 bits (173), Expect = 5e-12
Identities = 29/61 (47%), Positives = 44/61 (72%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
EY+ K++R K+E CNG VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHG
Sbjct: 520 EYNYAKVLRDLKRELCCNGNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHG 579
Query: 435 F 437
F
Sbjct: 580 F 580
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 190 VHVRIQQRNGRKTLTTVQGL 249
VHVR+QQRNGRKTLTTVQG+
Sbjct: 498 VHVRVQQRNGRKTLTTVQGI 517
>UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|Rep:
H0303G06.6 protein - Oryza sativa (Rice)
Length = 241
Score = 73.7 bits (173), Expect = 5e-12
Identities = 29/61 (47%), Positives = 44/61 (72%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
EY+ K++R K+E CNG VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHG
Sbjct: 181 EYNYAKVLRDLKRELCCNGNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHG 240
Query: 435 F 437
F
Sbjct: 241 F 241
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +1
Query: 130 TFDPFADAI---KSSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
TFD FADA ++ VHVR+QQRNGRKTLTTVQG+
Sbjct: 136 TFDAFADAEGEDAAAGRGAGGDYVHVRVQQRNGRKTLTTVQGI 178
>UniRef50_Q00T99 Cluster: Translation initiation factor SUI1,
putative; n=1; Ostreococcus tauri|Rep: Translation
initiation factor SUI1, putative - Ostreococcus tauri
Length = 129
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +3
Query: 261 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
+LK +V+ CKK+F CNG +VE E+G+++QLQGDQR+NI Q+L + K +KVHG
Sbjct: 70 NLKLVVKECKKKFNCNGCIVEDSEHGDIVQLQGDQRKNIAQFLVDERISKKALIKVHG 127
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1
Query: 169 DDVQDGLVHVRIQQRNGRKTLTTVQGLS 252
D VQ +H+R+QQRNGRK+LTTVQGL+
Sbjct: 39 DSVQGNYIHIRMQQRNGRKSLTTVQGLN 66
>UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15;
Pezizomycotina|Rep: Translation initiation factor 3 -
Botryotinia fuckeliana B05.10
Length = 169
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT-KSGL-VKPEQLKV 428
++D KKI++ KK+FACNGT+V G+V+QLQGDQR+++ ++LT K GL ++ + +KV
Sbjct: 107 KFDQKKILKVIKKKFACNGTIVNDVIMGDVIQLQGDQRKDVQEFLTGKDGLELEAKTIKV 166
Query: 429 HGF 437
HGF
Sbjct: 167 HGF 169
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +1
Query: 115 IQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
I+NL FDPFA+A + D +H+RIQQRNGRKTLTTVQGL
Sbjct: 60 IENLKVFDPFAEADEEPGDQKAAEYIHIRIQQRNGRKTLTTVQGL 104
>UniRef50_Q6MVC9 Cluster: Probable translation initiation factor
SUI1; n=2; Neurospora crassa|Rep: Probable translation
initiation factor SUI1 - Neurospora crassa
Length = 117
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVV--EHPEYGEVLQLQGDQRENICQWLTK--SGL-VKPEQ 419
++D KKI++ KKEFACNGT++ E + G+V+QLQGDQR I +LT GL + +
Sbjct: 52 KFDAKKILKVVKKEFACNGTIIGDEDSKMGDVIQLQGDQRAKIKDFLTNKDEGLGLDAKT 111
Query: 420 LKVHGF 437
+KVHGF
Sbjct: 112 IKVHGF 117
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIK--SSEDDVQDGLVHVRIQQRNGRKTLTTVQGL 249
MSI+NL T+DPFA+A + S + +H+RIQQRNGRKTLTTVQG+
Sbjct: 1 MSIENLKTYDPFAEADEEDSGQTKQTQEYIHIRIQQRNGRKTLTTVQGI 49
>UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 165
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +3
Query: 258 YDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWL-TKSGL-VKPEQLKVH 431
+++KK+V+A KK+FAC ++VE +GEV+Q+QGD R+ I ++L TK GL + E + VH
Sbjct: 105 FNMKKVVKAFKKKFACACSIVEDKVFGEVIQIQGDYRQKIYEFLTTKDGLELDEENVVVH 164
Query: 432 G 434
G
Sbjct: 165 G 165
>UniRef50_Q86AU4 Cluster: Similar to translation initiation factor 3
(EIF3); Sui1p; n=2; Dictyostelium discoideum|Rep:
Similar to translation initiation factor 3 (EIF3); Sui1p
- Dictyostelium discoideum (Slime mold)
Length = 110
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +3
Query: 261 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 437
DLKKI++ KK CNG +VE G +++LQGD+R+ I +L + + + +K+HGF
Sbjct: 52 DLKKILKHLKKSLNCNGNIVEEENLGMIIKLQGDKRKEIALFLIEEKISQKPSIKIHGF 110
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +1
Query: 112 SIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSNMT*RRSCGHAR 291
SIQNLN+ DPFA+ D VH+RI QR+GRK +TTV+GL + ++ H +
Sbjct: 3 SIQNLNSADPFAEDSNLGGDS-GISYVHIRIFQRSGRKAVTTVEGLPPKIDLKKILKHLK 61
Query: 292 RS 297
+S
Sbjct: 62 KS 63
>UniRef50_UPI000150A7AF Cluster: Translation initiation factor SUI1
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor SUI1 family protein -
Tetrahymena thermophila SB210
Length = 101
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
E+D +KI++ KK +CN T+VE E +V++L GD R I Q+L++ G+ + + +HG
Sbjct: 41 EFDYEKIMKYWKKWLSCNATIVEEDEGKKVIKLNGDHRNQIQQFLSEEGIAAVDNITIHG 100
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 169 DDVQDGLVHVRIQQRNGRKTLTTVQGL 249
DD Q +H+R++QR GRK TTV+G+
Sbjct: 13 DDFQTH-IHIRVEQRRGRKCFTTVEGI 38
>UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPE-YGE--VLQLQGDQRENICQWLTKSGLVKPEQLK 425
E+DL KI+R KK+F C G ++ E YG+ ++L GD R+ I ++L + G+ + +K
Sbjct: 44 EFDLNKIIRFWKKQFNCTGGIISKDEDYGDQVTIRLTGDNRQQIAKFLVEEGIALQDNIK 103
Query: 426 VHG 434
VHG
Sbjct: 104 VHG 106
>UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations,
putative; n=1; Filobasidiella neoformans|Rep: Suppressor
of initiator codon mutations, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 159
Score = 53.2 bits (122), Expect = 7e-06
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 19/80 (23%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPE---------------YGEVLQLQGDQRENICQWL 389
+Y+ KI++A KKEFACNGTVV+ PE +G+VLQLQGDQR Q+L
Sbjct: 81 KYNHSKILKAMKKEFACNGTVVK-PEVDSGEEDSPAPVAKNHGDVLQLQGDQRVAAKQFL 139
Query: 390 TKSGLVKPEQLK----VHGF 437
SG+V ++ K VHG+
Sbjct: 140 IDSGIVAQKEAKDLIVVHGY 159
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Frame = +1
Query: 115 IQNLN-TFDPFADA-----IKSSEDDV--QDGLVHVRIQQRNGRKTLTTVQGLSS 255
++NL FDPFA S E V ++ +H+R+QQRNGRKTLTTVQG+ S
Sbjct: 26 VENLGPAFDPFAPVNDLNDTPSIEKAVGSKNDKIHIRLQQRNGRKTLTTVQGIPS 80
>UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating
factor DNA sequence; n=1; Nicotiana tabacum|Rep:
Nicotiana tabacum (clone 12) activating factor DNA
sequence - Nicotiana tabacum (Common tobacco)
Length = 81
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 109 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 246
+ +Q + FDPFA+A S ++ VH+RIQQRNG+K+LTTVQG
Sbjct: 35 IDVQIPSAFDPFAEAKDSGAPGAKE-YVHIRIQQRNGKKSLTTVQG 79
>UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;
Trypanosomatidae|Rep: Translation factor SUI1, putative
- Leishmania major
Length = 107
Score = 49.6 bits (113), Expect = 9e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3
Query: 261 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVH 431
+ ++I R ++ + CNGTV+ P+ G V+QLQG+ ENI Q+L + L++H
Sbjct: 49 NFRRINREFQRRWGCNGTVISTPDAGTVIQLQGNWSENIKQFLLDEHMATENNLEIH 105
Score = 39.9 bits (89), Expect = 0.069
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 NTFDPFADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTVQGLSSNMT*RR 273
+T + + + +E V G VH+R+QQR G+K +TTVQGL+ + RR
Sbjct: 3 DTVEAIVNQQRETERAVLGGQKVHIRVQQRKGKKFVTTVQGLNQKLNFRR 52
>UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Translation
initiation factor - Entamoeba histolytica HM-1:IMSS
Length = 110
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 YDLKKIVRACKKEFACNGTVVEHPEYGEV-LQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
YD I++ K+ F CNG++ + + GEV +L GDQR+ + G++ PE +K+HG
Sbjct: 51 YDADLILKHFKRTFNCNGSLQKSKD-GEVEFKLSGDQRKAASNFFLAEGILLPENIKIHG 109
Query: 435 F 437
F
Sbjct: 110 F 110
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 187 LVHVRIQQRNGRKTLTTVQGL 249
+VH RIQQRNGRK +TT+ G+
Sbjct: 27 IVHFRIQQRNGRKCVTTITGI 47
>UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1;
Guillardia theta|Rep: Translation factor sui1 homolog -
Guillardia theta (Cryptomonas phi)
Length = 149
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = +3
Query: 261 DLKKIVRACKKEFACNG--TVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQL 422
DLKKI+RA K+ F CNG V+++ +Y VL L GDQR+N+ +L ++ PE+L
Sbjct: 91 DLKKILRAMKQRFGCNGRIDVIKNNDY--VLLLNGDQRDNVKDFLCIEKIL-PEKL 143
>UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Protein
translation factor SUI1 homolog - Mimivirus
Length = 106
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 261 DLKKIVRACKKEFACNGTVVE-HPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 437
DLK ++ K F C+G++ + + + + +QL GD RE + +L K+ +VK + +HG+
Sbjct: 47 DLKLFLKKLKYTFHCSGSIQQNYDDDSKFIQLSGDHRELVKNFLIKNSIVKESNIVMHGY 106
>UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 family
protein; n=2; Trichomonas vaginalis G3|Rep: Translation
initiation factor SUI1 family protein - Trichomonas
vaginalis G3
Length = 111
Score = 42.3 bits (95), Expect = 0.013
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 261 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 434
D K++ KK C G ++ +V+QL GD R+ + ++ K + E + VHG
Sbjct: 53 DCDKVLSFFKKSLCCGGEIIAEENGTKVIQLNGDHRQKVAEFFIKEKIAPKEMVIVHG 110
>UniRef50_Q7R4J9 Cluster: GLP_49_44768_45085; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_49_44768_45085 - Giardia lamblia
ATCC 50803
Length = 105
Score = 40.7 bits (91), Expect = 0.039
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 258 YDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVK-PEQLKVH 431
Y+ KIV+A K++ C+ V + + + + ++G+ I +WL + +VK EQ+K H
Sbjct: 42 YNFDKIVKAIKRDLCCSAYVFDETDGTKSIHVRGNYYREIVEWLLRERIVKVKEQIKPH 100
>UniRef50_Q00YW3 Cluster: Density-regulated protein related to
translation initiation factor 1; n=2; Ostreococcus|Rep:
Density-regulated protein related to translation
initiation factor 1 - Ostreococcus tauri
Length = 173
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLK 425
+ DLK+ +A K+FAC +V + + L LQGD E + + + K+ V E L+
Sbjct: 110 DVDLKEASKAFGKKFACGCSVTKGATGKDELDLQGDYSEQLGELIVKTYDVSAEDLR 166
>UniRef50_Q54CC3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 702
Score = 34.7 bits (76), Expect = 2.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 669 QSNEIVNIPNSLFLFLYDIVFLNCCNNSINKYMF 770
QSN++ +IPNS+ L +++ +NC NN + F
Sbjct: 503 QSNQLTSIPNSIGLNCVNLISINCSNNQLESIPF 536
>UniRef50_A1ZBA1 Cluster: CG30115-PD, isoform D; n=4; Sophophora|Rep:
CG30115-PD, isoform D - Drosophila melanogaster (Fruit
fly)
Length = 1593
Score = 33.5 bits (73), Expect = 6.0
Identities = 18/83 (21%), Positives = 40/83 (48%)
Frame = +1
Query: 67 RSVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 246
R ++QR+ F R ++ N ++FD F ++++ E+ + + RN T +Q
Sbjct: 932 RRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQK 990
Query: 247 LSSNMT*RRSCGHARRSSRATVR 315
L++ M R+ + ++ V+
Sbjct: 991 LAAAMRYRKRDAAVKEETKTPVK 1013
>UniRef50_A1C8E3 Cluster: RNA binding protein Tma22, putative; n=15;
Pezizomycotina|Rep: RNA binding protein Tma22, putative
- Aspergillus clavatus
Length = 194
Score = 33.5 bits (73), Expect = 6.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 267 KKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWL 389
KK+ + K+FA +V + P E + +QGD E++ +WL
Sbjct: 129 KKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWL 169
>UniRef50_Q9V1U3 Cluster: Protein translation factor SUI1 homolog;
n=4; Thermococcaceae|Rep: Protein translation factor
SUI1 homolog - Pyrococcus abyssi
Length = 99
Score = 33.1 bits (72), Expect = 7.9
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 255 EYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSG 401
E+DL++I + K + AC GT + G + +LQGD R+ I + L + G
Sbjct: 47 EFDLEEIAKKLKAKLACGGTA----KNGRI-ELQGDHRDRIKKLLAELG 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,723,595
Number of Sequences: 1657284
Number of extensions: 14460415
Number of successful extensions: 37316
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 35883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37304
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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