Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0065.Seq
(620 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 103 3e-21
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 95 2e-18
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 89 8e-17
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 88 2e-16
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 81 3e-14
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 79 1e-13
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 77 5e-13
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 73 4e-12
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 73 7e-12
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 70 4e-11
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 68 2e-10
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 62 1e-08
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 59 7e-08
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 55 1e-06
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 45 0.001
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 45 0.002
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 44 0.003
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 44 0.004
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 43 0.007
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 39 0.11
UniRef50_Q4UFM7 Cluster: Putative uncharacterized protein; n=2; ... 37 0.45
UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome... 36 0.59
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 36 0.78
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 36 0.78
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 34 2.4
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 33 4.2
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 33 4.2
UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;... 32 9.6
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 103 bits (247), Expect = 3e-21
Identities = 52/103 (50%), Positives = 65/103 (63%)
Frame = +3
Query: 78 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T K P G +
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
QTV Q FR NLY LKE + M++ LLY++RFGPY
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPY 103
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +2
Query: 347 VVNLIV*PTFRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGM 526
V NL+ F P EPVIAGLDP P+ LIGCP +DFV G E++YGM
Sbjct: 91 VANLLYEKRFGPYYTEPVIAGLDPKTF-KPFICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
Query: 527 CXALWGXPTXKPD 565
C +LW P PD
Sbjct: 150 CESLW-EPNMDPD 161
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 94.7 bits (225), Expect = 2e-18
Identities = 48/103 (46%), Positives = 59/103 (57%)
Frame = +3
Query: 78 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
MSILA+NG AV+ M G+DC AIA D RFG+ QT+ST K G
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
QTV Q FR N+Y L+E + + + MLS LLY+RRFGPY
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPY 103
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/63 (42%), Positives = 34/63 (53%)
Frame = +2
Query: 353 NLIV*PTFRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCX 532
NL+ F P +EPV+AG+D PY LIGC + DFV G E++YGMC
Sbjct: 93 NLLYERRFGPYFVEPVVAGIDHTT-SKPYVACMDLIGCVCEANDFVVSGTCTEQMYGMCE 151
Query: 533 ALW 541
LW
Sbjct: 152 TLW 154
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 89.0 bits (211), Expect = 8e-17
Identities = 45/103 (43%), Positives = 62/103 (60%)
Frame = +3
Query: 78 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
MSI++YNGGA++AMKG++ VAIA D+ FGIQAQ V+T + P G +
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
Q V Q F+ NLY LKE + F+ M++ LY++ FGPY
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPY 103
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/73 (41%), Positives = 38/73 (52%)
Frame = +2
Query: 347 VVNLIV*PTFRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGM 526
V N + F P +PVIAGLD L P+ LIG P +DFV G E++YGM
Sbjct: 91 VANFLYEKHFGPYYTDPVIAGLD-LKTFKPFSCSLDLIGFPMVTDDFVVNGSYAEQMYGM 149
Query: 527 CXALWGXPTXKPD 565
C +LW P P+
Sbjct: 150 CESLW-EPNMDPE 161
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 87.8 bits (208), Expect = 2e-16
Identities = 55/146 (37%), Positives = 77/146 (52%)
Frame = +3
Query: 78 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
MSI YNG AVVAM G++C AIA+D+R G+Q QTV+T + S
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPYLWNLS*LA*IPYXNPTL 437
QT+ Q FR LY L+E + + F+ ++S LLY++RFGPY +A + N
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQ-PVIAGLGEDNEP- 118
Query: 438 MVCXMA*LVAQMTLKILWVSGPCSKS 515
+C M + A+ K VSG S+S
Sbjct: 119 FICTMDCIGAKELAKDFVVSGTASES 144
Score = 36.7 bits (81), Expect = 0.45
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +2
Query: 374 FRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALWGXPT 553
F P +PVIAGL P+ IG +DFV G E LYG C +++ P
Sbjct: 100 FGPYFCQPVIAGLGEDN--EPFICTMDCIGAKELAKDFVVSGTASESLYGACESMY-KPN 156
Query: 554 XKPDE 568
+P+E
Sbjct: 157 MEPEE 161
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 80.6 bits (190), Expect = 3e-14
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +3
Query: 63 FYITNMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ-TVSTQLPKSIPXGTHXVXRPS 239
F+ I +YNGGA+VAM G+ CVAIA DKR G+ Q TVS+ PK+ S
Sbjct: 11 FHYNFGDITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAAS 70
Query: 240 RXRX*TQTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
QT+ F+ N+Y L+ +K S M+ ++LY RRFGP+
Sbjct: 71 GLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPW 119
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2
Query: 374 FRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALWGXPT 553
F P ++ VIAGLD +PY L+G P P DFV G E+LYG+C AL+ P
Sbjct: 116 FGPWFVDSVIAGLDTDS--SPYITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALF-KPG 172
Query: 554 XKPDE 568
P++
Sbjct: 173 MDPEQ 177
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +3
Query: 81 SILAYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
SI+ YNGGA++AMKG++CVA ATD R G +T+ST K I + + S
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
T+ F+ NLY L+E +K S M +++LY +RF PY
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPY 103
Score = 39.9 bits (89), Expect = 0.048
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +2
Query: 374 FRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALWGXPT 553
F P +EP++AGLD P+ + LIGC + +F G +L+G+C + + P
Sbjct: 100 FSPYFVEPIVAGLDNNN--VPFIAGYDLIGCLSVCSEFAISGTADNQLFGICESYY-RPD 156
Query: 554 XKPDEXL 574
+PDE +
Sbjct: 157 LEPDELM 163
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/103 (36%), Positives = 59/103 (57%)
Frame = +3
Query: 78 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
MSIL Y+GG+ +AM G++C + +D R G Q +T+S ++PK V + R
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
QT Q FR +Y L+E K F+ ++S++LY+ RFGP+
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPW 103
Score = 49.6 bits (113), Expect = 6e-05
Identities = 28/65 (43%), Positives = 35/65 (53%)
Frame = +2
Query: 374 FRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALWGXPT 553
F P +EPVI +D Y LIG P +PED+V G E L+GMC ALW P
Sbjct: 100 FGPWFVEPVIGTIDRKT-GEVYLCATDLIGAPCEPEDYVCAGTCAESLHGMCEALW-RPG 157
Query: 554 XKPDE 568
+P+E
Sbjct: 158 LEPEE 162
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 73.3 bits (172), Expect = 4e-12
Identities = 40/103 (38%), Positives = 54/103 (52%)
Frame = +3
Query: 78 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
MSI++Y GG VVAM G +CV IA+D R G Q T++T K + +
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
+TV + FR NLY L+E + + S M+S L Y RFG Y
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSY 103
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/74 (37%), Positives = 34/74 (45%)
Frame = +2
Query: 347 VVNLIV*PTFRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGM 526
+ NL F EP++AGLD PY IGC + P DFV +G E L G+
Sbjct: 91 ISNLAYQHRFGSYFTEPLVAGLDDTN--KPYICCMDTIGCVSAPRDFVAVGTGQEYLLGV 148
Query: 527 CXALWGXPTXKPDE 568
C W KPDE
Sbjct: 149 CENFW-RENMKPDE 161
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 72.5 bits (170), Expect = 7e-12
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 84 ILAYNGGAVVAMKGQDCVAIATDKRFGI-QAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQ 260
++ YNG A+VAM G CV IA+D R+G+ Q QTV Q K+ + Q
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 261 TVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
T+ Q FR L+ L+E + + ++S++LY++RFGPY
Sbjct: 64 TMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPY 105
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +2
Query: 374 FRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALWGXPT 553
F P EPV+AGLD NP+ IG + +DFV G E+L+G+C + W P
Sbjct: 102 FGPYFTEPVVAGLDKDH--NPFLCAFDFIGAMSKAQDFVVSGTSSEQLFGVCESFW-RPK 158
Query: 554 XKPDE 568
DE
Sbjct: 159 MNKDE 163
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 81 SILAYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTQLPKSIPXGTHXVXRPSRXRX*T 257
SI YNGG V+ M G CVAIA D R G TVST K + S
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPYLWN 395
QT+ + +R NLY +++ + F+ MLS++LY RF PY N
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVN 108
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 434 PYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALW 541
PY + LIG + +DFV G E+LYGMC +L+
Sbjct: 132 PYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLY 167
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +3
Query: 81 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXG 215
SI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T K P G
Sbjct: 26 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMG 70
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +3
Query: 81 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSI-PXGTHXVXRPSRXRX*T 257
+I YNG A++ +KG DCVA+A DKR G QT++ + I + + +
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 258 QTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
T + + NLY L+E R + + M+S+ LY RFGPY
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPY 105
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 59.3 bits (137), Expect = 7e-08
Identities = 32/98 (32%), Positives = 48/98 (48%)
Frame = +3
Query: 93 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQ 272
Y+GGAVV M G+ CVAIA D R+G++ Q S K + + + QT+ +
Sbjct: 8 YSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAE 67
Query: 273 XXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
+ NLY L+E + + +LY +RF PY
Sbjct: 68 KVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPY 105
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +3
Query: 111 VAMKGQDCVAIATDKRFGI-QAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQXXXFR 287
VAM G+DCVAIA+D R GI Q QT + K + T+ Q F+
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 288 XNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
++Y L+E + K F+ ++ST LY++RF PY
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPY 102
Score = 42.3 bits (95), Expect = 0.009
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +2
Query: 374 FRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALWGXPT 553
F+P EPV+AGLD PY LIG +DFV G E L+G+C + +
Sbjct: 99 FQPYYTEPVVAGLDKDG--KPYITSMDLIGADASADDFVVAGDNVESLFGVCESFY-RKD 155
Query: 554 XKPDE 568
+PDE
Sbjct: 156 LEPDE 160
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/99 (30%), Positives = 41/99 (41%)
Frame = +3
Query: 90 AYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVX 269
A+NGG V+A+ G+D +A+D R S PK V S T+
Sbjct: 31 AFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLT 90
Query: 270 QXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
+ R +Y + MLST+LY RRF PY
Sbjct: 91 KIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPY 129
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/99 (29%), Positives = 44/99 (44%)
Frame = +3
Query: 93 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQ 272
+ GG+++AM VAI DKR G+ + TVS + G TQ + +
Sbjct: 7 FYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLLR 66
Query: 273 XXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPYL 389
NL+ L+ + S M+S LLY +R PY+
Sbjct: 67 KIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYI 105
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 380 PLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGMCXALW 541
P + P++AGL PY IG P DFV +G + L G+C AL+
Sbjct: 103 PYITAPIVAGLTSDG--KPYISGMDCIGSIASPGDFVAVGTADKNLMGICEALY 154
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +3
Query: 96 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQX 275
NGG V+ + G+D V +A D R + + PK + S + +T+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 276 XXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
+ L+ L+ + + +L +LY RRF PY
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPY 133
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 43.6 bits (98), Expect = 0.004
Identities = 27/98 (27%), Positives = 40/98 (40%)
Frame = +3
Query: 93 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQ 272
+NGG ++A+ G+D +A+D R + PK V S T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 273 XXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
R +Y + MLST+LY RRF PY
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPY 132
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 42.7 bits (96), Expect = 0.007
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = +3
Query: 96 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQX 275
NGG+ VA+ G D V IA D R + S + K+ + S + +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 276 XXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
+ LY + + + +LS +LY +RF PY
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPY 139
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 38.7 bits (86), Expect = 0.11
Identities = 25/64 (39%), Positives = 32/64 (50%)
Frame = +2
Query: 347 VVNLIV*PTFRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFVGIGPLFEKLYGM 526
+ NL+ F P EPVIA LD L P+ LI CP +DFV E++ GM
Sbjct: 58 MANLLYKKQFGPCYTEPVIAWLD-LKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGM 116
Query: 527 CXAL 538
C +L
Sbjct: 117 CESL 120
>UniRef50_Q4UFM7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 335
Score = 36.7 bits (81), Expect = 0.45
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -3
Query: 594 PXXDLSPRXSSGFXVGXPQXAXHIPYSFSNRGPIPTKSSGSFGQPIK-PXYRP*GLGXHR 418
P P+ + G+ P PY GP P ++ G +GQP K P Y P G
Sbjct: 119 PTGGYPPQATGGYGQPGPYQTGPYPYPQGQPGPYPVQTPGGYGQPGKGPAYPPDPYGASG 178
Query: 417 GSRP 406
G P
Sbjct: 179 GYGP 182
>UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Proteasome (prosome, macropain) subunit, beta type, 3,
partial - Ornithorhynchus anatinus
Length = 104
Score = 36.3 bits (80), Expect = 0.59
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +2
Query: 374 FRPLLMEPVIAGLDPLX*PNPYGLXHGLIGCPNDPEDFV 490
F P EPVIAGLDP P+ LIGCP +DFV
Sbjct: 66 FGPYYTEPVIAGLDPTT-FEPFICSLDLIGCPMVTDDFV 103
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 35.9 bits (79), Expect = 0.78
Identities = 26/97 (26%), Positives = 36/97 (37%)
Frame = +3
Query: 96 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQX 275
NGG++VA+ G D IA D R S K V + T ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGS 87
Query: 276 XXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
R Y + + MLS +Y+RRF PY
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPY 124
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 35.9 bits (79), Expect = 0.78
Identities = 27/104 (25%), Positives = 38/104 (36%)
Frame = +3
Query: 75 NMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX* 254
N S NGG VA+ G D IA D R +S K V S +
Sbjct: 7 NWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQAD 66
Query: 255 TQTVXQXXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
+ + + R +Y + + +LS LY +RF PY
Sbjct: 67 VKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPY 110
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 34.3 bits (75), Expect = 2.4
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = +3
Query: 93 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQ 272
+N G V A+ D V +A DKR VS + K + S + +
Sbjct: 41 FNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSK 100
Query: 273 XXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
R ++Y ++ + +LS LY +RF PY
Sbjct: 101 QLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPY 138
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 33.5 bits (73), Expect = 4.2
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +3
Query: 96 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRX-RX*TQTVXQ 272
NGG+++A+ G+D IA D R + ++ T+ + + T V + +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 273 XXXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
R Y LK + M+ T+LY +RF PY
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPY 126
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 33.5 bits (73), Expect = 4.2
Identities = 23/97 (23%), Positives = 36/97 (37%)
Frame = +3
Query: 96 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTQLPKSIPXGTHXVXRPSRXRX*TQTVXQX 275
NGG VA+ G D +A D R + ++ K S + + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 276 XXFRXNLYXLKEXXLXRLKXFSXMLSTLLYDRRFGPY 386
R LY + + +LS LY +RF PY
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPY 108
>UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;
Eukaryota|Rep: Proteasomal subunit beta type III - Mus
musculus (Mouse)
Length = 48
Score = 32.3 bits (70), Expect = 9.6
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 144 ATDKRFGIQAQTVSTQLPKSIPXG 215
A D+RFGIQAQ V+T K P G
Sbjct: 8 AADRRFGIQAQMVTTDFQKIFPMG 31
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,120,765
Number of Sequences: 1657284
Number of extensions: 10779002
Number of successful extensions: 21531
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 20894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21491
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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