Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0026.Seq
(830 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5L0 Cluster: Signal sequence receptor; n=2; Endopter... 112 9e-24
UniRef50_Q4T5B3 Cluster: Chromosome undetermined SCAF9335, whole... 53 8e-06
UniRef50_A7RRI8 Cluster: Predicted protein; n=1; Nematostella ve... 51 3e-05
UniRef50_Q4T9K6 Cluster: Chromosome undetermined SCAF7543, whole... 51 4e-05
UniRef50_Q9W335 Cluster: CG32701-PA; n=5; Endopterygota|Rep: CG3... 50 7e-05
UniRef50_UPI0000E46DC1 Cluster: PREDICTED: hypothetical protein;... 49 1e-04
UniRef50_P43307 Cluster: Translocon-associated protein subunit a... 47 5e-04
UniRef50_Q95XT5 Cluster: Putative uncharacterized protein; n=2; ... 46 0.001
UniRef50_Q9SJQ6 Cluster: Protein ROS1; n=1; Arabidopsis thaliana... 36 0.94
UniRef50_Q94FM0 Cluster: Pol polyprotein; n=6; core eudicotyledo... 33 6.6
UniRef50_P93261 Cluster: rRNA N-glycosidase; n=1; Mesembryanthem... 33 6.6
UniRef50_A7F6J3 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 6.6
>UniRef50_Q2F5L0 Cluster: Signal sequence receptor; n=2;
Endopterygota|Rep: Signal sequence receptor - Bombyx
mori (Silk moth)
Length = 279
Score = 112 bits (270), Expect = 9e-24
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +1
Query: 256 PRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 411
PRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD
Sbjct: 228 PRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 279
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/63 (50%), Positives = 34/63 (53%)
Frame = +2
Query: 113 YNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXRRRYHVQCLSPLKLEQ 292
YNQTLNIVEVSEGLDGETFFLYVF RRR SP + Q
Sbjct: 180 YNQTLNIVEVSEGLDGETFFLYVFLGAGGVLALVAGQQALASLARRR------SPRSVSQ 233
Query: 293 PVK 301
PV+
Sbjct: 234 PVE 236
>UniRef50_Q4T5B3 Cluster: Chromosome undetermined SCAF9335, whole
genome shotgun sequence; n=8; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9335,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 219
Score = 53.2 bits (122), Expect = 8e-06
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +1
Query: 259 RSVSQPVETGTASE--VDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 411
R + VETGT+S VD W+P+E +NQ+ K+ +PK+SPR R KRSAG D
Sbjct: 168 RRPAPKVETGTSSHDGVDLSWIPQETLNQINKA--SPKRSPRKRSQKRSAGSD 218
>UniRef50_A7RRI8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 291
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +1
Query: 241 GQT*IPRSVSQ-PVETGTASE--VDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 411
G T I +S S+ P+E GT + +DY+WLPKE + S +P++SPR R+ KR+ GD+
Sbjct: 233 GLTSIKKSSSKAPIEMGTQQDGDIDYEWLPKETTTEFA-SKNSPRRSPRNRRQKRNTGDE 291
Score = 40.7 bits (91), Expect = 0.044
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +2
Query: 113 YNQTLNIVEVSEGLDGETFFLYVF 184
+N+T+ +VE EG+DGETFFLY+F
Sbjct: 195 FNETVQLVESDEGMDGETFFLYLF 218
>UniRef50_Q4T9K6 Cluster: Chromosome undetermined SCAF7543, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7543,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 316
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +1
Query: 259 RSVSQPVETGTASE--VDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 411
R + VE GT+S VD W+P+E +NQ+ K+ +PK+SPR R KRSAG D
Sbjct: 265 RRPAPKVEMGTSSHNGVDLSWIPQETLNQINKA--SPKRSPRKRSQKRSAGSD 315
Score = 38.3 bits (85), Expect = 0.23
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 113 YNQTLNIVEVSEGLDGETFFLYVF 184
+NQT+ + E +GLDGET F+YVF
Sbjct: 221 FNQTVTVTEKEDGLDGETIFMYVF 244
>UniRef50_Q9W335 Cluster: CG32701-PA; n=5; Endopterygota|Rep:
CG32701-PA - Drosophila melanogaster (Fruit fly)
Length = 302
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 21/66 (31%)
Frame = +1
Query: 277 VETGTASE--VDYDWLPKEIVNQLKKSP---KTPK----------------QSPRARKAK 393
+ETGTA++ +DYDW+P+E + L+KSP KTPK QSP+ RK K
Sbjct: 237 IETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKPTKPASPKAASQQSPKQRKVK 296
Query: 394 RSAGDD 411
RSAGDD
Sbjct: 297 RSAGDD 302
Score = 39.9 bits (89), Expect = 0.076
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 113 YNQTLNIVEVSEGLDGETFFLYV 181
+N+T+ I EV EGLDGETFFLYV
Sbjct: 182 FNETVLISEVDEGLDGETFFLYV 204
>UniRef50_UPI0000E46DC1 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 247
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 259 RSVSQPVETGTAS--EVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAG 405
++ Q VETGT++ +VDYDW+PKE N KK+P +P++SPR R+ KRS G
Sbjct: 197 KTSKQVVETGTSNHTDVDYDWIPKE--NIAKKTP-SPRRSPR-RRTKRSGG 243
>UniRef50_P43307 Cluster: Translocon-associated protein subunit
alpha precursor; n=51; Euteleostomi|Rep:
Translocon-associated protein subunit alpha precursor -
Homo sapiens (Human)
Length = 286
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = +1
Query: 271 QPVETGTASE--VDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAGDD 411
Q VE GT+S+ VD W+P+E +NQ+ K+ +P++ PR R KRS G D
Sbjct: 239 QKVEMGTSSQNDVDMSWIPQETLNQINKA--SPRRLPRKRAQKRSVGSD 285
Score = 37.9 bits (84), Expect = 0.31
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +2
Query: 113 YNQTLNIVEVSEGLDGETFFLYVF 184
+NQT+ ++E +GLDGET F+Y+F
Sbjct: 190 FNQTVTVIEREDGLDGETIFMYMF 213
>UniRef50_Q95XT5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 257
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/43 (51%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 277 VETGTASEVDYDWLPKEIV-NQLKKSPKTPKQSPRARKAKRSA 402
VE GT+SEVD++W+P++ V N+ K+SP T SP+ARK+ + A
Sbjct: 216 VEQGTSSEVDFEWIPRDAVKNKEKRSPAT--VSPKARKSAKKA 256
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 113 YNQTLNIVEVSEGLDGETFFLYVF 184
YNQT+NI+E G GET FL++F
Sbjct: 162 YNQTINIMEDDSGFSGETGFLFIF 185
>UniRef50_Q9SJQ6 Cluster: Protein ROS1; n=1; Arabidopsis
thaliana|Rep: Protein ROS1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1393
Score = 36.3 bits (80), Expect = 0.94
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 220 TASPRFIGQT*IPRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRS 399
TAS F GQT IP ++ ++ GT + + Q+ K+P+ PK+ K +R
Sbjct: 70 TASLIFSGQTPIPTRNTEVMQKGTEEVESLSSVSNNVAEQILKTPEKPKRKKHRPKVRRE 129
Query: 400 A 402
A
Sbjct: 130 A 130
>UniRef50_Q94FM0 Cluster: Pol polyprotein; n=6; core
eudicotyledons|Rep: Pol polyprotein - Citrus paradisi
(Grapefruit)
Length = 701
Score = 33.5 bits (73), Expect = 6.6
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +2
Query: 320 LKKL*INSKNLPRRRSSRRAQGKQRDQQATTKKSFEVMIKRDIKHKPVVHTSVCEMTEIK 499
L+KL IN K++P + + + K + T+ SF++ I+R+ + ++H+ +C+ I+
Sbjct: 474 LRKL-INMKHIPNFQIDLKHKCKTCVEAKLTRSSFQI-IQRNSEPLDLIHSDICDFKSIQ 531
Query: 500 IGLNHAYLIKF 532
+ Y I F
Sbjct: 532 TRGGNKYFITF 542
>UniRef50_P93261 Cluster: rRNA N-glycosidase; n=1; Mesembryanthemum
crystallinum|Rep: rRNA N-glycosidase - Mesembryanthemum
crystallinum (Common ice plant)
Length = 289
Score = 33.5 bits (73), Expect = 6.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 253 IPRSVSQPVETGTASEVDYDWLPKEIVNQLKKSPKTPKQSPRARKAKRSAG 405
I + + P +T E ++ + KEI NQ K +P+TP + R K G
Sbjct: 205 IAETAANPDDTAICLENNWSKISKEIYNQFKGNPQTPAKDVTVRTCKNLKG 255
>UniRef50_A7F6J3 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 1060
Score = 33.5 bits (73), Expect = 6.6
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 253 IPRSVSQPVET-GTASEVDYDWLPKEIVNQLKKSPKTPKQSPRA 381
IP+ + PVET G ASE + P EI ++ ++PK+ K+ PRA
Sbjct: 433 IPKVLDLPVETPGEASEATPEATP-EISKEISQTPKSTKKIPRA 475
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,504,275
Number of Sequences: 1657284
Number of extensions: 12691827
Number of successful extensions: 30762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30740
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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