Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0035
         (682 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09JM0 Cluster: 10 kDa putative secreted protein; n=1; ...    66   6e-10
UniRef50_Q7RFQ2 Cluster: Putative uncharacterized protein PY0465...    59   1e-07
UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY0192...    48   2e-04
UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa g...    41   0.032
UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY0656...    35   1.6  

>UniRef50_Q09JM0 Cluster: 10 kDa putative secreted protein; n=1;
           Argas monolakensis|Rep: 10 kDa putative secreted protein
           - Argas monolakensis
          Length = 102

 Score = 66.5 bits (155), Expect = 6e-10
 Identities = 31/46 (67%), Positives = 31/46 (67%)
 Frame = -2

Query: 252 WSLXTAGRWPWKSESAKECATTHHPKQPALKMDGAEAFCLYTTVTG 115
           W L TAGRWPWK ESAKEC TTH PKQ A KMDGA A  L     G
Sbjct: 8   WLLRTAGRWPWKLESAKECVTTHLPKQLAPKMDGAIASNLSQAAAG 53


>UniRef50_Q7RFQ2 Cluster: Putative uncharacterized protein PY04653;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04653 - Plasmodium yoelii yoelii
          Length = 124

 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = -2

Query: 240 TAGRWPWKSESAKECATTHHPKQPALKMDGAEAFCLYTTV 121
           T GRW WKS+SAKEC TTH P + ALKMDGA+A   Y  +
Sbjct: 2   TVGRWSWKSKSAKECVTTHLPNELALKMDGAKADYRYQAI 41


>UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY01927;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01927 - Plasmodium yoelii yoelii
          Length = 193

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 24/30 (80%), Positives = 24/30 (80%)
 Frame = +3

Query: 150 RHPFSGLVASDGESLHTP*RIPTSMATVLL 239
           RHPFSGLV S GE LHTP RI TSM TVLL
Sbjct: 57  RHPFSGLVHSVGELLHTPWRISTSMITVLL 86


>UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa
           group|Rep: Predicted protein - Pichia stipitis (Yeast)
          Length = 94

 Score = 40.7 bits (91), Expect = 0.032
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 175 LRMVSRCTLLSGFRLPWPPSCCXERPT 255
           +R VS  TLLSGFRLPWPPS C +  T
Sbjct: 2   IRPVSCYTLLSGFRLPWPPSGCLDELT 28



 Score = 37.1 bits (82), Expect = 0.40
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +2

Query: 281 FRRLNTTFGSSXSAISAYQNWPT 349
           FR  N TFGSS  A SAYQ WPT
Sbjct: 38  FRHFNFTFGSSRIASSAYQKWPT 60



 Score = 35.1 bits (77), Expect = 1.6
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 393 GVLTHLKFENRLRXFRPQCL 452
           G+LT+LKFENRLR F+PQ L
Sbjct: 75  GLLTYLKFENRLRSFQPQDL 94


>UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY06566;
           n=3; cellular organisms|Rep: Putative uncharacterized
           protein PY06566 - Plasmodium yoelii yoelii
          Length = 114

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +2

Query: 281 FRRLNTTFGSSXSAISAYQNWPTWHRHQISG 373
           FR L    G+S  A SAYQ WPTW     SG
Sbjct: 8   FRHLIQALGASLIASSAYQKWPTWSYFIYSG 38


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,025,136
Number of Sequences: 1657284
Number of extensions: 15332697
Number of successful extensions: 31895
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31891
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)