Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C08f
(346 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000F2D92B Cluster: PREDICTED: similar to adipocyte ... 65 3e-10
UniRef50_P56720 Cluster: Sterol regulatory element-binding prote... 61 4e-09
UniRef50_P36956 Cluster: Sterol regulatory element-binding prote... 58 5e-08
UniRef50_Q16SL7 Cluster: Sterol regulatory element-binding prote... 56 1e-07
UniRef50_A7RVU6 Cluster: Predicted protein; n=2; Nematostella ve... 50 1e-05
UniRef50_Q12772 Cluster: Sterol regulatory element-binding prote... 50 1e-05
UniRef50_UPI0000DB7C6E Cluster: PREDICTED: similar to Helix loop... 47 7e-05
UniRef50_Q9VW37 Cluster: CG8522-PA, isoform A; n=3; Sophophora|R... 47 7e-05
UniRef50_Q4H2R4 Cluster: Transcription factor protein; n=1; Cion... 42 0.003
UniRef50_UPI0000586A9C Cluster: PREDICTED: hypothetical protein;... 40 0.015
UniRef50_Q9XX00 Cluster: Putative uncharacterized protein sbp-1;... 39 0.026
UniRef50_A6VS24 Cluster: Tetratricopeptide TPR_2 repeat protein;... 34 0.56
UniRef50_Q9A3K9 Cluster: TonB-dependent receptor; n=1; Caulobact... 33 1.3
UniRef50_A7F9A0 Cluster: Putative uncharacterized protein; n=1; ... 32 2.3
UniRef50_A6S697 Cluster: Putative uncharacterized protein; n=1; ... 32 3.0
UniRef50_A1SHE7 Cluster: ABC transporter related precursor; n=1;... 31 4.0
UniRef50_Q2IFF7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.3
UniRef50_A1UQJ4 Cluster: Protein kinase; n=2; Mycobacterium|Rep:... 31 5.3
UniRef50_Q5H5C3 Cluster: Putative uncharacterized protein; n=6; ... 31 6.9
UniRef50_UPI000049A12B Cluster: protein kinase; n=2; Entamoeba h... 30 9.2
UniRef50_Q18ZW6 Cluster: 5-amino-6-(5-phosphoribosylamino)uracil... 30 9.2
UniRef50_A6GMN2 Cluster: Cellulose synthase operon C-like protei... 30 9.2
UniRef50_A1HU71 Cluster: BFD domain protein (2Fe-2S)-binding dom... 30 9.2
UniRef50_A0QRS0 Cluster: ABC-type transport system periplasmic s... 30 9.2
UniRef50_Q10DJ7 Cluster: Retrotransposon protein, putative, uncl... 30 9.2
UniRef50_A6SF65 Cluster: Predicted protein; n=1; Botryotinia fuc... 30 9.2
>UniRef50_UPI0000F2D92B Cluster: PREDICTED: similar to adipocyte
determination and differentiation-dependent factor 1;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
adipocyte determination and differentiation-dependent
factor 1 - Monodelphis domestica
Length = 1145
Score = 64.9 bits (151), Expect = 3e-10
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T F +L+N +++ ++L +YG+ + + S + LF++H++ A +L +GD L
Sbjct: 593 TLFFWLLNLLVVVAAFIRLFIYGEPITRPHSGPSILFWRHRKQADLDLARGDFAQASQHL 652
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
AL A GR + A +L ++R LQRL G +LA RAG L RD
Sbjct: 653 WLALRALGRPLPTSHLDLA--CSLLWNLIRHVLQRLWLGRWLADRAGGLLRD 702
>UniRef50_P56720 Cluster: Sterol regulatory element-binding protein
1; n=11; Euteleostomi|Rep: Sterol regulatory
element-binding protein 1 - Rattus norvegicus (Rat)
Length = 1024
Score = 61.3 bits (142), Expect = 4e-09
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L N +++ CL L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 514 VWLANGLLVLACLALLFVYGEPVTRPHSGPAVHFWRHRKQADLDLARGDFAQAAQQLWLA 573
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L+A GR + A +L ++R LQRL G +LA +AG L RD
Sbjct: 574 LQALGRPLPTSNLDLA--CSLLWNLVRHLLQRLWVGRWLAGQAGGLQRD 620
>UniRef50_P36956 Cluster: Sterol regulatory element-binding protein
1; n=51; Amniota|Rep: Sterol regulatory element-binding
protein 1 - Homo sapiens (Human)
Length = 1147
Score = 57.6 bits (133), Expect = 5e-08
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L+N +++ LV L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 549 VWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLA 608
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L A GR + A +L ++R LQRL G +LA RAG L +D
Sbjct: 609 LRALGRPLPTSHLDLA--CSLLWNLIRHLLQRLWVGRWLAGRAGGLQQD 655
>UniRef50_Q16SL7 Cluster: Sterol regulatory element-binding protein;
n=1; Aedes aegypti|Rep: Sterol regulatory
element-binding protein - Aedes aegypti (Yellowfever
mosquito)
Length = 844
Score = 56.4 bits (130), Expect = 1e-07
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
I+ +N +L CLVK+LVYGD + S+SK ++KHK+ + + ++G+ + + E R
Sbjct: 214 IFAINIALLLFCLVKMLVYGDPILPSRSKAFTEYWKHKKQSDLDFQRGNASASLQEAKRC 273
Query: 198 LEACGRSVQAGGPGQAKYTALTAA--VLRQXLQRLPFGGFLARRAGDLWR 341
L G ++ P T T +R L R+ G + +RR G L++
Sbjct: 274 LAPFGVTI----PNSRLETITTTGWQFVRMFLHRIYIGRWFSRRTGGLFK 319
>UniRef50_A7RVU6 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 867
Score = 50.0 bits (114), Expect = 1e-05
Identities = 33/104 (31%), Positives = 50/104 (48%)
Frame = +3
Query: 15 FIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHR 194
F +L+N +L G LVK+ V+G+ V + S + LF++HK A +L +GD + +L
Sbjct: 258 FKWLLNVALLIGVLVKIFVFGEPVTRPHSDRSTLFWRHKNQADLDLSRGDNISAARQLEI 317
Query: 195 ALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRA 326
L GR + + LR L RL G +LA A
Sbjct: 318 CLRVLGRPMPTS--KLDVFCGFVWHSLRHILFRLGIGTWLASTA 359
>UniRef50_Q12772 Cluster: Sterol regulatory element-binding protein
2; n=38; Tetrapoda|Rep: Sterol regulatory
element-binding protein 2 - Homo sapiens (Human)
Length = 1141
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +GD L
Sbjct: 538 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNL 597
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L GR++ A +L+ V+R LQ+L +L ++
Sbjct: 598 QTCLAVLGRALPTSRLDLA--CSLSWNVIRYSLQKLRLVRWLLKK 640
>UniRef50_UPI0000DB7C6E Cluster: PREDICTED: similar to Helix loop
helix protein 106 CG8522-PA, isoform A; n=1; Apis
mellifera|Rep: PREDICTED: similar to Helix loop helix
protein 106 CG8522-PA, isoform A - Apis mellifera
Length = 824
Score = 47.2 bits (107), Expect = 7e-05
Identities = 28/104 (26%), Positives = 54/104 (51%)
Frame = +3
Query: 3 FNTFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRL 182
++ ++L+N ++L G L +LL+YGD + S SK ++ +R A N+ K + +
Sbjct: 251 WSNLLLWLMNTILLIGGLCRLLLYGDPILPSDSKIFLELHRWRRQAEFNISKSEYSQAYR 310
Query: 183 ELHRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFL 314
+LH+ L+ GR + + A ++RQ L +L G ++
Sbjct: 311 DLHQCLQYLGRPYPSS--RTEAWLATMWQIIRQLLHKLWIGKWI 352
>UniRef50_Q9VW37 Cluster: CG8522-PA, isoform A; n=3; Sophophora|Rep:
CG8522-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1113
Score = 47.2 bits (107), Expect = 7e-05
Identities = 35/108 (32%), Positives = 53/108 (49%)
Frame = +3
Query: 15 FIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHR 194
+I+L+NF ++ GCLVKLLVYGD P+ + + + +H++ A +G +
Sbjct: 506 WIWLLNFTLMLGCLVKLLVYGD--PQLDA-QTDAYCQHRQRADFYFSQGQSSQAYAGYLN 562
Query: 195 ALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLW 338
L G S+ A Y T LR RL G L+RR+G L+
Sbjct: 563 CLHMFGLSLPAS--RLECYLQTTWQFLRFLFHRLWLGRVLSRRSGGLF 608
>UniRef50_Q4H2R4 Cluster: Transcription factor protein; n=1; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 814
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +3
Query: 3 FNTFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRL 182
F T +L+N I G L +LLV G+ V + +SK + ++ H++ A +++K D +
Sbjct: 472 FPTLLSWLINGFISIGILWRLLVTGEPVTEEKSKTSSKYWIHRKQADLDVEKDDYESASY 531
Query: 183 ELHRALEACGR 215
L ++L GR
Sbjct: 532 HLSQSLAVIGR 542
>UniRef50_UPI0000586A9C Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 766
Score = 39.5 bits (88), Expect = 0.015
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++L+N I+ LV +L YGD KS S +++++ A + KG++ +L
Sbjct: 622 TLLVWLMNGTIIATVLVTML-YGDKTGKSSSINVTAYWRYRTQAEQEIMKGNIAQALNQL 680
Query: 189 HRALEACGRSVQAGGPG--QAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
A GR+ G + + L L + G +L+R GD +D
Sbjct: 681 FHCFAALGRNHPLGNLEYYASFFWNLFCLPLNVFFKGRGIGAWLSRPKGDKQKD 734
>UniRef50_Q9XX00 Cluster: Putative uncharacterized protein sbp-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein sbp-1 - Caenorhabditis elegans
Length = 1113
Score = 38.7 bits (86), Expect = 0.026
Identities = 27/106 (25%), Positives = 49/106 (46%)
Frame = +3
Query: 6 NTFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLE 185
N ++++ N +++ +VKLL++GD V S F + A L G+L + + +
Sbjct: 540 NMSYVWVFNILMIIYVVVKLLIHGDPVQDFMSVSWQTFVTTREKARAELNSGNLKDAQRK 599
Query: 186 LHRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L RS+ + PG ++ +R L L G ++ARR
Sbjct: 600 FCECLATLDRSLPS--PGVDSVFSVGWECVRHLLNWLWIGRYIARR 643
>UniRef50_A6VS24 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Marinomonas sp. MWYL1|Rep: Tetratricopeptide TPR_2
repeat protein - Marinomonas sp. MWYL1
Length = 293
Score = 34.3 bits (75), Expect = 0.56
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 12 FFIYLVNFVIL-GGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
F++ LV FV+L GGC ++ G + +S++ E + +LA + L+ E+
Sbjct: 14 FYLLLVCFVVLLGGCSTQVTKSGSQISESKTVETDTAEEALKLA-HLLRNNGRYQAAYEV 72
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVL 275
+ ++ G Q GP +Y +L+A++L
Sbjct: 73 YEKMDEKG---QLEGPFVLEYASLSASIL 98
>UniRef50_Q9A3K9 Cluster: TonB-dependent receptor; n=1; Caulobacter
vibrioides|Rep: TonB-dependent receptor - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 1125
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 192 RALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWR 341
R+ AC + QA GPG K L A L+ + LP G + AG WR
Sbjct: 47 RSWRACSVAFQASGPGGTKACRLCTAHLKVSKKNLPIGAAASAPAG--WR 94
>UniRef50_A7F9A0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 487
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 243 LDLGHLPGHFFHMLPMLDGVLVAYYLDRPF*DCCQQAFYVCKINQLPWTDFL 88
+ L HLP F + P + + D+P C F C I++LPW + L
Sbjct: 221 MSLQHLPNFTFCLNPTCESGQIHKSADQPMMTCTTCNFKTCFIHKLPWHEDL 272
>UniRef50_A6S697 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 528
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -2
Query: 243 LDLGHLPGHFFHMLPMLDGVLVAYYLDRPF*DCCQQAFYVCKINQLPWTDFL 88
+ L HLP F + P + + D P C F C I++LPW + L
Sbjct: 195 MSLQHLPNFTFCLSPKCESGQIHTGPDHPMMTCTTCGFKTCFIHKLPWHEDL 246
>UniRef50_A1SHE7 Cluster: ABC transporter related precursor; n=1;
Nocardioides sp. JS614|Rep: ABC transporter related
precursor - Nocardioides sp. (strain BAA-499 / JS614)
Length = 631
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 225 AGGPGQAKYTALTAAVLRQXLQRLPFG 305
+GGP +A YTAL AA L ++ LP G
Sbjct: 468 SGGPDEATYTALAAARLTGMIESLPHG 494
>UniRef50_Q2IFF7 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
uncharacterized protein - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 310
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 138 AGNNLKKGDLNNTRLELHRALEACGRSVQAGGPGQAKYTALTAAVL 275
A N ++G + + RALEA + A G +AK+ AL A VL
Sbjct: 198 AQNAFRQGQWSTVVTDARRALEAAAGAATADGDRRAKFEALLAQVL 243
>UniRef50_A1UQJ4 Cluster: Protein kinase; n=2; Mycobacterium|Rep:
Protein kinase - Mycobacterium sp. (strain KMS)
Length = 576
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 192 RALEACGRSVQAGGPGQAKYTAL-TAAVLRQXLQRLPFG 305
RA+ +CG +V AGGP A YT + A L+ L + G
Sbjct: 467 RAVLSCGANVDAGGPASATYTLVEDAGALQSALDEVISG 505
>UniRef50_Q5H5C3 Cluster: Putative uncharacterized protein; n=6;
Xanthomonas|Rep: Putative uncharacterized protein -
Xanthomonas oryzae pv. oryzae
Length = 198
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 SMWKKCPGRWPRSS*VHGP-HSGCASAXVAEITVRWLPCTSRWRSVEG 343
S W+ P R + V+G GCA +TV WL +W +V G
Sbjct: 44 SQWQSLPRRGAYVAAVNGTLGGGCAGLIAGGVTVAWLHAWHQWPAVLG 91
>UniRef50_UPI000049A12B Cluster: protein kinase; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
histolytica HM-1:IMSS
Length = 1917
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 263 CE-GRVLSLTWATCLDTSSTCFQCS 192
CE G LSLT+ C S +CFQC+
Sbjct: 1385 CEKGTYLSLTYKKCYKCSESCFQCT 1409
>UniRef50_Q18ZW6 Cluster: 5-amino-6-(5-phosphoribosylamino)uracil
reductase; n=3; Bacteria|Rep:
5-amino-6-(5-phosphoribosylamino)uracil reductase -
Desulfitobacterium hafniense (strain DCB-2)
Length = 240
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 225 PGHFFHMLPMLDGVLVAYYLDRPF*DCCQQAFY 127
P F HM+ LDG ++ Y+D P + +AFY
Sbjct: 4 PYIFCHMMTSLDGKIMGSYMDTPEGEAAGKAFY 36
>UniRef50_A6GMN2 Cluster: Cellulose synthase operon C-like protein;
n=1; Limnobacter sp. MED105|Rep: Cellulose synthase
operon C-like protein - Limnobacter sp. MED105
Length = 805
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 183 ELHRALEACGR-SVQAGGPGQAKYTALTAAVLRQXLQRLPFGGF 311
EL A A G ++Q GGPG T L A+ RQ L+ GG+
Sbjct: 721 ELAAAAAAQGNPTLQIGGPGGGTSTGLRLALERQVLKNFVVGGY 764
>UniRef50_A1HU71 Cluster: BFD domain protein (2Fe-2S)-binding domain
protein; n=1; Thermosinus carboxydivorans Nor1|Rep: BFD
domain protein (2Fe-2S)-binding domain protein -
Thermosinus carboxydivorans Nor1
Length = 254
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 208 VEEVSRQVAQVKLSTRPSQRLCFGXCCR 291
V E +R VA VKL TR LC G CR
Sbjct: 185 VREGARTVAAVKLRTRTGMGLCQGRTCR 212
>UniRef50_A0QRS0 Cluster: ABC-type transport system periplasmic
substrate-binding protein; n=1; Mycobacterium smegmatis
str. MC2 155|Rep: ABC-type transport system periplasmic
substrate-binding protein - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 431
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +3
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L ACG GG G A T AVL + GG +A+R LW D
Sbjct: 30 LAACGGDTGGGGGGGASDTFKVGAVL-ELSGESATGGQIAQRGYQLWAD 77
>UniRef50_Q10DJ7 Cluster: Retrotransposon protein, putative,
unclassified; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 793
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 66 LVYGDS-VPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRALEACGRSVQAG 230
L YGD P+ + AG +H + + + GD+ N R L A GRS G
Sbjct: 75 LTYGDGDSPRGALQAAGALLRHPPVNAEHPQVGDVANLVTTAQRQLTAGGRSTATG 130
>UniRef50_A6SF65 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 610
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 75 GDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRALEACGR 215
G + P+ +S++ G YK +A + L +GD NT L EA GR
Sbjct: 500 GKTDPQKRSEQCGFMYKQLAVAFSTLCRGD--NTPLTTEWEAEAAGR 544
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,617,891
Number of Sequences: 1657284
Number of extensions: 7121457
Number of successful extensions: 19865
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 19361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19858
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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