BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0024.Seq (368 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF... 72 4e-12 UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep:... 69 4e-11 UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila pseudoobscu... 62 4e-09 UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11; Endopteryg... 61 5e-09 UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep: Re... 52 3e-06 UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L - ... 49 3e-05 UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome s... 48 4e-05 UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep: R... 48 7e-05 UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep... 47 1e-04 UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon ... 46 2e-04 UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep: ... 46 2e-04 UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep: R... 46 2e-04 UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo ... 46 2e-04 UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep: Re... 46 2e-04 UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus fa... 45 4e-04 UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulo... 45 4e-04 UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep: Re... 45 4e-04 UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep: Re... 45 4e-04 UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2... 44 7e-04 UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whol... 43 0.002 UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep: ... 43 0.002 UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 prote... 42 0.003 UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep: Reticu... 42 0.003 UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep: Reticul... 42 0.003 UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.014 UniRef50_A7SJN6 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.014 UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xeno... 39 0.025 UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep: Ret... 37 0.13 UniRef50_Q24199 Cluster: Tropomyosin-like protein; n=2; Drosophi... 35 0.41 UniRef50_Q5DE04 Cluster: SJCHGC02814 protein; n=1; Schistosoma j... 35 0.54 UniRef50_Q4G5T7 Cluster: Reticulon 8-c; n=6; Clupeocephala|Rep: ... 33 1.3 UniRef50_Q21313 Cluster: Laminin-like protein epi-1 precursor; n... 33 1.7 UniRef50_Q4G5K8 Cluster: Reticulon 2c; n=6; Clupeocephala|Rep: R... 32 3.8 UniRef50_UPI0000E23758 Cluster: PREDICTED: similar to KIAA0853 p... 31 8.9 UniRef50_Q2RZV1 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 31 8.9 UniRef50_Q00SK2 Cluster: Ubiquinone/menaquinone biosynthesi; n=2... 31 8.9 UniRef50_Q5T200 Cluster: Zinc finger CCCH domain-containing prot... 31 8.9 UniRef50_O51757 Cluster: UDP-N-acetylmuramate--L-alanine ligase;... 31 8.9 >UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF, isoform F; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG33113-PF, isoform F - Tribolium castaneum Length = 479 Score = 71.7 bits (168), Expect = 4e-12 Identities = 30/49 (61%), Positives = 41/49 (83%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGDKDK 106 LF+LPK YE NK Q+DANLE+ R K+ EIT+KV+AA+P+G++AE KD+ Sbjct: 431 LFSLPKVYETNKTQIDANLEIVRTKLAEITSKVKAAIPIGKKAEEKKDQ 479 Score = 52.8 bits (121), Expect = 2e-06 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K GVLLW LTY+GA FNG+TLII+ W+ Sbjct: 400 DSIKFGVLLWTLTYLGAWFNGMTLIIIAWV 429 >UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep: Reticulon/nogo - Aedes aegypti (Yellowfever mosquito) Length = 493 Score = 68.5 bits (160), Expect = 4e-11 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGDKDK 106 LFTLPK YE NK +DA LEL R+KI E++ K++AAVP+G++AE +KDK Sbjct: 445 LFTLPKVYENNKQSIDAYLELVRSKILEVSDKIKAAVPIGKKAETEKDK 493 Score = 47.2 bits (107), Expect = 1e-04 Identities = 18/30 (60%), Positives = 26/30 (86%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K GV+L+CLTYVGA FNG+T +I+ ++ Sbjct: 414 DSIKFGVVLYCLTYVGAIFNGMTCVIIAFV 443 >UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila pseudoobscura|Rep: GA17292-PA - Drosophila pseudoobscura (Fruit fly) Length = 547 Score = 61.7 bits (143), Expect = 4e-09 Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 5/55 (9%) Frame = -3 Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106 +LFTLPK YE NK +D L+L R+K+ EIT K+R A+P+G + AE DKDK Sbjct: 493 SLFTLPKVYENNKQSIDTYLDLVRSKLTEITDKIRVAIPIGNKKPVAAAESDKDK 547 Score = 47.6 bits (108), Expect = 7e-05 Identities = 18/30 (60%), Positives = 25/30 (83%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K GV+LW TY+GA FNG+TL+IL ++ Sbjct: 463 DSIKFGVILWVFTYIGAWFNGMTLVILAFV 492 >UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11; Endopterygota|Rep: CG33113-PF, isoform F - Drosophila melanogaster (Fruit fly) Length = 595 Score = 61.3 bits (142), Expect = 5e-09 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%) Frame = -3 Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106 +LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK Sbjct: 541 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 595 Score = 48.0 bits (109), Expect = 5e-05 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K GV+LW TYVGA FNG+TL+IL ++ Sbjct: 511 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 540 >UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep: Reticulon 4-l - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 322 Score = 52.0 bits (119), Expect = 3e-06 Identities = 23/30 (76%), Positives = 26/30 (86%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK VL+W LTYVGA FNG+TLIILG+I Sbjct: 247 DSLKFAVLMWILTYVGALFNGLTLIILGFI 276 >UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L - Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri) Length = 383 Score = 48.8 bits (111), Expect = 3e-05 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK VL+W LTYVGA FNG+TL ILG + Sbjct: 307 DSLKFAVLMWILTYVGALFNGLTLFILGLV 336 Score = 31.5 bits (68), Expect = 5.1 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGD 115 +F+ P YE K Q+D + +A + +I A V++ VP +R + + Sbjct: 338 MFSCPIVYEKYKVQIDHYVGMANKHVKDIIATVQSKVPGLKRVKAE 383 >UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome shotgun sequence; n=2; Tetraodon nigroviridis|Rep: Chromosome 17 SCAF14760, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 991 Score = 48.4 bits (110), Expect = 4e-05 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK L+W LTYVGA FNG+TL+ILG I Sbjct: 916 DSLKFAALMWILTYVGALFNGLTLLILGLI 945 Score = 35.5 bits (78), Expect = 0.31 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -3 Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121 L +F+ P YE ++AQ+D L L ++ +I K++A VP + R+ E Sbjct: 944 LIAVFSCPIVYEKHQAQIDHYLALVNNQVKDIVGKIQAKVPGMKRKTE 991 >UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep: RTN-B2 - Ciona intestinalis (Transparent sea squirt) Length = 377 Score = 47.6 bits (108), Expect = 7e-05 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = -1 Query: 341 SLKXGVLLWCLTYVGACFNGITLIILGWI 255 SLK V +W LTY+G CFNG+TL+ILG I Sbjct: 303 SLKFAVFMWLLTYIGCCFNGLTLLILGVI 331 >UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep: Reticulon 1-A1 - Fugu rubripes (Japanese pufferfish) (Takifugu rubripes) Length = 729 Score = 46.8 bits (106), Expect = 1e-04 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK VL+W LTYVGA FNG+TL+IL Sbjct: 654 DSLKFAVLMWLLTYVGALFNGLTLLIL 680 Score = 42.7 bits (96), Expect = 0.002 Identities = 16/45 (35%), Positives = 29/45 (64%) Frame = -3 Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAE 121 ++FT+P YE ++AQ+D + L R +N + K++A +P +R E Sbjct: 684 SMFTMPVVYEKHQAQIDQYVGLIRTHVNSVVGKIQAKIPGAKRKE 728 >UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon 4 isoform B2; n=3; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to reticulon 4 isoform B2 - Strongylocentrotus purpuratus Length = 943 Score = 46.4 bits (105), Expect = 2e-04 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K V LW LTYVGA FNG+TLIIL +I Sbjct: 868 DSIKFAVGLWLLTYVGAWFNGLTLIILAYI 897 Score = 31.1 bits (67), Expect = 6.7 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAE 121 LF++P YE +AQ+D + A+ +IN ++ +P ++ E Sbjct: 899 LFSMPVVYEKYQAQIDDAVGKAQEQINTALTNIKTKIPWLKKKE 942 >UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep: Reticulon 5-a1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 818 Score = 46.4 bits (105), Expect = 2e-04 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K VL+W LTYVGA FNG+TL+IL I Sbjct: 744 DSIKFAVLMWLLTYVGALFNGLTLLILAVI 773 Score = 38.7 bits (86), Expect = 0.033 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = -3 Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAE 121 ++F++P YE + Q+D L L R ++N + K+R VP ++ E Sbjct: 774 SMFSVPVVYEKYQTQIDQYLGLVRTQVNSVMGKIREKVPGAKKKE 818 >UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep: Reticulon 1-a1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 767 Score = 46.0 bits (104), Expect = 2e-04 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK VL+W LTYVGA FNG+TL+I+ Sbjct: 692 DSLKFAVLMWLLTYVGALFNGLTLLIM 718 Score = 39.9 bits (89), Expect = 0.014 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121 +F++P YE +AQ+D ++L R ++N + AK++ VP R+AE Sbjct: 723 MFSMPVVYEKYQAQIDQYVDLIRTQVNSVVAKIQEKVPGTKRKAE 767 >UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo sapiens (Human) Length = 373 Score = 46.0 bits (104), Expect = 2e-04 Identities = 20/30 (66%), Positives = 23/30 (76%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK VL+W TYVGA FNG+TL+IL I Sbjct: 298 DSLKFAVLMWVFTYVGALFNGLTLLILALI 327 Score = 40.3 bits (90), Expect = 0.011 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -3 Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121 L +LF++P YE ++AQ+D L LA + + AK++A +P L R+AE Sbjct: 326 LISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE 373 >UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep: Reticulon-4 - Homo sapiens (Human) Length = 1192 Score = 46.0 bits (104), Expect = 2e-04 Identities = 20/30 (66%), Positives = 23/30 (76%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK VL+W TYVGA FNG+TL+IL I Sbjct: 1117 DSLKFAVLMWVFTYVGALFNGLTLLILALI 1146 Score = 40.3 bits (90), Expect = 0.011 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = -3 Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121 L +LF++P YE ++AQ+D L LA + + AK++A +P L R+AE Sbjct: 1145 LISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE 1192 >UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus familiaris|Rep: reticulon 1 - Canis familiaris Length = 689 Score = 45.2 bits (102), Expect = 4e-04 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK VL+W LTYVGA FNG+TL+++ Sbjct: 614 DSLKFAVLMWLLTYVGALFNGLTLLLM 640 Score = 42.3 bits (95), Expect = 0.003 Identities = 18/43 (41%), Positives = 28/43 (65%) Frame = -3 Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR 127 ++FTLP Y ++AQ+D L L R IN + AK++A +P +R Sbjct: 644 SMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKIQAKIPGAKR 686 >UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulon-3 - Mus musculus (Mouse) Length = 964 Score = 45.2 bits (102), Expect = 4e-04 Identities = 19/27 (70%), Positives = 22/27 (81%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK V +W +TYVGA FNGITL+IL Sbjct: 888 DSLKLAVFMWLMTYVGAVFNGITLLIL 914 Score = 31.5 bits (68), Expect = 5.1 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139 +F++P YE K Q+D + +AR + I K++A +P Sbjct: 919 VFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLP 956 >UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep: Reticulon-3 - Homo sapiens (Human) Length = 1032 Score = 45.2 bits (102), Expect = 4e-04 Identities = 19/27 (70%), Positives = 22/27 (81%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK V +W +TYVGA FNGITL+IL Sbjct: 956 DSLKLAVFMWLMTYVGAVFNGITLLIL 982 Score = 31.9 bits (69), Expect = 3.8 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139 +F++P YE K Q+D + +AR + I K++A +P Sbjct: 987 IFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLP 1024 >UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep: Reticulon-1 - Homo sapiens (Human) Length = 776 Score = 45.2 bits (102), Expect = 4e-04 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK VL+W LTYVGA FNG+TL+++ Sbjct: 701 DSLKFAVLMWLLTYVGALFNGLTLLLM 727 Score = 42.3 bits (95), Expect = 0.003 Identities = 18/43 (41%), Positives = 28/43 (65%) Frame = -3 Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR 127 ++FTLP Y ++AQ+D L L R IN + AK++A +P +R Sbjct: 731 SMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKR 773 >UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2 - Xenopus laevis (African clawed frog) Length = 1055 Score = 44.4 bits (100), Expect = 7e-04 Identities = 18/30 (60%), Positives = 23/30 (76%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK VL+W TY+GA FNG+TL+I+ I Sbjct: 980 DSLKFAVLMWVFTYIGALFNGLTLLIVALI 1009 >UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF10698, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 214 Score = 42.7 bits (96), Expect = 0.002 Identities = 16/27 (59%), Positives = 22/27 (81%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK ++W +TYVGA FNG+TL+I+ Sbjct: 137 DSLKVATVMWVMTYVGAIFNGVTLLII 163 >UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep: Reticulon 6-a1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 875 Score = 42.7 bits (96), Expect = 0.002 Identities = 19/30 (63%), Positives = 23/30 (76%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK V LW LTYVG+ FNG+TL+I+ I Sbjct: 800 DSLKLAVGLWLLTYVGSWFNGLTLLIIALI 829 >UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 protein, partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to RTN2 protein, partial - Ornithorhynchus anatinus Length = 188 Score = 42.3 bits (95), Expect = 0.003 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK +L + LT+VGA FNG+TL+ILG I Sbjct: 118 DSLKLALLFYILTFVGAVFNGLTLLILGVI 147 >UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep: Reticulon-2 - Mus musculus (Mouse) Length = 471 Score = 42.3 bits (95), Expect = 0.003 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILG 261 DSLK +L + LT+VGA FNG+TL+ILG Sbjct: 384 DSLKLALLFYILTFVGAIFNGLTLVILG 411 Score = 36.7 bits (81), Expect = 0.13 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139 LFT+P Y ++AQ+D + L +++ I AK+RA +P Sbjct: 415 LFTVPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIP 452 >UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep: Reticulon-2 - Homo sapiens (Human) Length = 545 Score = 42.3 bits (95), Expect = 0.003 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DSLK +L + LT+VGA FNG+TL+ILG I Sbjct: 457 DSLKLALLFYILTFVGAIFNGLTLLILGVI 486 Score = 37.1 bits (82), Expect = 0.10 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139 LFT+P Y ++AQ+D + L +++ I AK+RA +P Sbjct: 488 LFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIP 525 >UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 177 Score = 39.9 bits (89), Expect = 0.014 Identities = 17/26 (65%), Positives = 22/26 (84%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLII 267 DS+K GV+LW L+YVGA F+ +TLII Sbjct: 115 DSIKFGVMLWVLSYVGAWFSMLTLII 140 >UniRef50_A7SJN6 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 208 Score = 39.9 bits (89), Expect = 0.014 Identities = 14/41 (34%), Positives = 29/41 (70%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGR 130 LFT+PKAY+M + ++++ + + ++++ K+ AAVPL + Sbjct: 147 LFTVPKAYDMYREEINSAMSTIKVAVDDLLDKINAAVPLAK 187 Score = 32.3 bits (70), Expect = 2.9 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K V+L+ L+Y+ F+GITL +G+I Sbjct: 116 DSIKLLVVLYILSYLAQWFSGITLTFIGFI 145 >UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xenopus laevis (African clawed frog) Length = 321 Score = 39.1 bits (87), Expect = 0.025 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 DSLK V+++ LTYVGA FNGIT+++L Sbjct: 246 DSLKFLVIVYLLTYVGAVFNGITVLLL 272 >UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep: Reticulon - Caenorhabditis remanei Length = 222 Score = 36.7 bits (81), Expect = 0.13 Identities = 14/27 (51%), Positives = 21/27 (77%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264 +S+K G++LW LTYV + F+G TL +L Sbjct: 139 ESIKFGLILWSLTYVASWFSGCTLAVL 165 >UniRef50_Q24199 Cluster: Tropomyosin-like protein; n=2; Drosophila melanogaster|Rep: Tropomyosin-like protein - Drosophila melanogaster (Fruit fly) Length = 158 Score = 35.1 bits (77), Expect = 0.41 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILG 261 DSLK VLL + +G CFNG+TL+I G Sbjct: 120 DSLKFLVLLCGINLLGDCFNGLTLLIFG 147 >UniRef50_Q5DE04 Cluster: SJCHGC02814 protein; n=1; Schistosoma japonicum|Rep: SJCHGC02814 protein - Schistosoma japonicum (Blood fluke) Length = 214 Score = 34.7 bits (76), Expect = 0.54 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = -1 Query: 341 SLKXGVLLWCLTYVGACFNGITLIIL 264 S+K VLL+ LTY+GA FN +TL IL Sbjct: 132 SIKFAVLLYLLTYIGAQFNFLTLCIL 157 Score = 34.7 bits (76), Expect = 0.54 Identities = 13/37 (35%), Positives = 27/37 (72%) Frame = -3 Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAV 142 +F +PK YE + ++D LELA++KI+ + ++V++ + Sbjct: 162 IFCVPKFYERYQPEIDKILELAKSKIDMVVSQVKSQI 198 >UniRef50_Q4G5T7 Cluster: Reticulon 8-c; n=6; Clupeocephala|Rep: Reticulon 8-c - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 208 Score = 33.5 bits (73), Expect = 1.3 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = -1 Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255 DS+K V L+ LTYVG NG+TL++ G I Sbjct: 117 DSVKFIVFLYLLTYVGVQANGLTLVMSGVI 146 >UniRef50_Q21313 Cluster: Laminin-like protein epi-1 precursor; n=4; Caenorhabditis|Rep: Laminin-like protein epi-1 precursor - Caenorhabditis elegans Length = 3672 Score = 33.1 bits (72), Expect = 1.7 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = -3 Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAK 157 LD++ + E KA++DAN+E RAKI+EI K Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616 >UniRef50_Q4G5K8 Cluster: Reticulon 2c; n=6; Clupeocephala|Rep: Reticulon 2c - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 203 Score = 31.9 bits (69), Expect = 3.8 Identities = 14/29 (48%), Positives = 22/29 (75%) Frame = -1 Query: 341 SLKXGVLLWCLTYVGACFNGITLIILGWI 255 SLK +L++ +T++G NG+TLII+G I Sbjct: 118 SLKFWLLMYVVTFLGNLCNGLTLIIIGVI 146 >UniRef50_UPI0000E23758 Cluster: PREDICTED: similar to KIAA0853 protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to KIAA0853 protein - Pan troglodytes Length = 1312 Score = 30.7 bits (66), Expect = 8.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 241 QREQRIQPRMMSVIPLKHAPTYVRHHSST 327 QRE+R +PR S H+P RHHSS+ Sbjct: 307 QREKRDKPRSTSPAGQHHSPISSRHHSSS 335 >UniRef50_Q2RZV1 Cluster: Peptidyl-prolyl cis-trans isomerase; n=2; Bacteria|Rep: Peptidyl-prolyl cis-trans isomerase - Salinibacter ruber (strain DSM 13855) Length = 706 Score = 30.7 bits (66), Expect = 8.9 Identities = 19/41 (46%), Positives = 20/41 (48%) Frame = -3 Query: 258 DTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 136 D L T P + KAQVD N L R KI A VRA L Sbjct: 59 DDLLTRPALQAVVKAQVDRNGALLREKIGADDADVRARAAL 99 >UniRef50_Q00SK2 Cluster: Ubiquinone/menaquinone biosynthesi; n=2; Ostreococcus|Rep: Ubiquinone/menaquinone biosynthesi - Ostreococcus tauri Length = 434 Score = 30.7 bits (66), Expect = 8.9 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = -3 Query: 324 AAVVPHVRGGVLQRDHAHHPRLD--TLFTLPKAYEMNKAQVDANLELARAKINEITAKVR 151 +++ HV + DHAH R + T +A + VDA + R + ++ A+V Sbjct: 5 SSITAHVTANRVNVDHAHQRRRRGRSSTTCRRATNASSPAVDAPADAFRRALEDVRARVN 64 Query: 150 AAVPL-GRRA 124 A+P+ RRA Sbjct: 65 DALPVEARRA 74 >UniRef50_Q5T200 Cluster: Zinc finger CCCH domain-containing protein 13; n=32; cellular organisms|Rep: Zinc finger CCCH domain-containing protein 13 - Homo sapiens (Human) Length = 1668 Score = 30.7 bits (66), Expect = 8.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 241 QREQRIQPRMMSVIPLKHAPTYVRHHSST 327 QRE+R +PR S H+P RHHSS+ Sbjct: 307 QREKRDKPRSTSPAGQHHSPISSRHHSSS 335 >UniRef50_O51757 Cluster: UDP-N-acetylmuramate--L-alanine ligase; n=3; Borrelia burgdorferi group|Rep: UDP-N-acetylmuramate--L-alanine ligase - Borrelia burgdorferi (Lyme disease spirochete) Length = 468 Score = 30.7 bits (66), Expect = 8.9 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -3 Query: 330 RRAAVVPHVRGGVLQRDHAHHPR--LDTLFTLPKAYEMNKAQVD 205 RR VV G + D+AHHPR +TLF + Y+ + +D Sbjct: 328 RRVEVVKEENGVIYMDDYAHHPREIKNTLFGIKNFYKNKRIILD 371 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 219,725,854 Number of Sequences: 1657284 Number of extensions: 2538254 Number of successful extensions: 9007 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 8822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9007 length of database: 575,637,011 effective HSP length: 90 effective length of database: 426,481,451 effective search space used: 13647406432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -