Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0026
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.069
UniRef50_UPI0000EB12D7 Cluster: Insulin receptor substrate 1 (IR...    36   0.85 
UniRef50_P84770 Cluster: Insulin receptor substrate 1-B; n=8; Eu...    35   1.5  
UniRef50_P35568 Cluster: Insulin receptor substrate 1; n=15; Amn...    34   2.6  
UniRef50_UPI0000DD7CB6 Cluster: PREDICTED: hypothetical protein;...    34   3.4  
UniRef50_Q69QZ7 Cluster: RING-H2 zinc finger protein-like; n=3; ...    33   6.0  
UniRef50_Q0JR97 Cluster: Os01g0113100 protein; n=13; Oryza sativ...    33   7.9  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 39.5 bits (88), Expect = 0.069
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = -1

Query: 220 AGWWYLPVRTHKTSYHQ*LCKL*LCG 143
           A WWYLP RTHK SYH+  C    CG
Sbjct: 569 AEWWYLPARTHKRSYHRYQCS--YCG 592


>UniRef50_UPI0000EB12D7 Cluster: Insulin receptor substrate 1
           (IRS-1).; n=1; Canis lupus familiaris|Rep: Insulin
           receptor substrate 1 (IRS-1). - Canis familiaris
          Length = 1080

 Score = 35.9 bits (79), Expect = 0.85
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
 Frame = -2

Query: 357 TGAHRHLQRKCHHPPLSHEL*GLTLNSTTAAPPFNRNALLLHGRTRQGGGTYPCGLTRRP 178
           T AHRH      HPPL+H    + + S+  +P       L    T   G T  C   RR 
Sbjct: 319 THAHRHRGSSRLHPPLNHSR-SIPMPSSRCSPSATSPVSLSSSSTSGHGSTSDCLFPRRS 377

Query: 177 TTSNYANYNFAGLIFITRCYIPSPC-FKNTILSL 79
           + S   + +  G I     Y  SPC F+++  S+
Sbjct: 378 SASVSGSPSDGGFISSDE-YGSSPCDFRSSFRSV 410


>UniRef50_P84770 Cluster: Insulin receptor substrate 1-B; n=8;
           Euteleostomi|Rep: Insulin receptor substrate 1-B -
           Xenopus laevis (African clawed frog)
          Length = 1088

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
 Frame = -2

Query: 357 TGAHRHLQRKCHHPPLSHEL*GLTLNSTTAAPPFNRNALLLHGRTRQGGGTYPCGLTRRP 178
           T +HRH      HPPL+H    + + +T  +P       L    T   G T  C   RR 
Sbjct: 350 TQSHRHRGSSRLHPPLNHSR-SIPMPATRCSPSATSPVSLSSSSTSGHGSTSDCMCPRRS 408

Query: 177 TTSNYANYNFAGLIFITRCYIPSPC-FKNTILSL 79
           + S   + +  G I     Y  SPC F+++  S+
Sbjct: 409 SASISGSPSDGGFISSDE-YGSSPCDFRSSFRSV 441


>UniRef50_P35568 Cluster: Insulin receptor substrate 1; n=15;
           Amniota|Rep: Insulin receptor substrate 1 - Homo sapiens
           (Human)
          Length = 1242

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
 Frame = -2

Query: 357 TGAHRHLQRKCHHPPLSHEL*GLTLNSTTAAPPFNRNALLLHGRTRQGGGTYPCGLTRRP 178
           T AHRH      HPPL+H    + + ++  +P       L    T   G T  C   RR 
Sbjct: 354 THAHRHRGSARLHPPLNHSR-SIPMPASRCSPSATSPVSLSSSSTSGHGSTSDCLFPRRS 412

Query: 177 TTSNYANYNFAGLIFITRCYIPSPC-FKNTILSL 79
           + S   + +  G I     Y  SPC F+++  S+
Sbjct: 413 SASVSGSPSDGGFISSDE-YGSSPCDFRSSFRSV 445


>UniRef50_UPI0000DD7CB6 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 179

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 22/59 (37%), Positives = 28/59 (47%)
 Frame = -2

Query: 354 GAHRHLQRKCHHPPLSHEL*GLTLNSTTAAPPFNRNALLLHGRTRQGGGTYPCGLTRRP 178
           G H H      H P   E     L+  +AAP F   +LL+ G+ R   GT P G +RRP
Sbjct: 123 GPHPHALA-ARHRPAGPEY-ASALHFLSAAPSFRPGSLLI-GQLRASSGTRPLGASRRP 178


>UniRef50_Q69QZ7 Cluster: RING-H2 zinc finger protein-like; n=3;
           Oryza sativa|Rep: RING-H2 zinc finger protein-like -
           Oryza sativa subsp. japonica (Rice)
          Length = 210

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -2

Query: 228 RTRQGGGTYPCGLTRRPTTSNYANYNFAGLIFITRC 121
           R RQGGG  PCG TRRP+   YA  +   L+  + C
Sbjct: 18  RLRQGGGEAPCG-TRRPSLCLYAGGHDHALLGSSAC 52


>UniRef50_Q0JR97 Cluster: Os01g0113100 protein; n=13; Oryza
           sativa|Rep: Os01g0113100 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 1851

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 210 GTYPCGLTRRPTTSNYANYNFAGLIFI-TRCYIPSPCFKNTILSLLKTKNDLLSLDCVYG 34
           GT     T + +  +   +++AGL F   RCY   PC K +++ +L   ND    DC + 
Sbjct: 633 GTRSATETVKLSYDSVVKFSYAGLSFTYNRCY-QFPCIKWSMIEILNYANDYCRSDCGFY 691

Query: 33  M 31
           M
Sbjct: 692 M 692


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,418,892
Number of Sequences: 1657284
Number of extensions: 11800863
Number of successful extensions: 22442
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22439
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)