Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0019
         (828 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    42   0.019
UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym...    41   0.044
UniRef50_A2F5N3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, who...    34   5.0  
UniRef50_Q02AK2 Cluster: Glycoside hydrolase, family 29 (Alpha-L...    33   6.6  
UniRef50_Q8IIH3 Cluster: Putative uncharacterized protein; n=4; ...    33   6.6  
UniRef50_A6GDF6 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  
UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma g...    33   8.7  
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0...    33   8.7  
UniRef50_Q23QF8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  
UniRef50_A0BWF5 Cluster: Chromosome undetermined scaffold_132, w...    33   8.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 41.9 bits (94), Expect = 0.019
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = -2

Query: 575 FFIA*WVDVFTAHLVLSGYWSP*H 504
           F +  WVD  TAHLVLSGYWSP H
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPRH 177


>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
           thermophila SB210|Rep: KOW motif family protein -
           Tetrahymena thermophila SB210
          Length = 778

 Score = 40.7 bits (91), Expect = 0.044
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = -1

Query: 261 YNYWNCKFVHYYDCILYFYNHKFRQDYTIKNIN 163
           Y+ + C+ +H Y  +++ +N KFR  YT++NIN
Sbjct: 622 YSGYQCQVIHVYKSLVFLFNPKFRDTYTVENIN 654


>UniRef50_A2F5N3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 180

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = -2

Query: 620 NYINNSLQYQETGDFFFIA*WVDVFTAHLVLSGYWSP*HPQRKCATHLEINSKVSSIVRT 441
           NY   S+ Y+ET ++  +A W  +  AH V+     P   +RK     E +  +  +  T
Sbjct: 75  NYFRRSMSYKETKEYKIVAFWFGIRAAHEVIVNGLPPNISRRKIFKEFEKHGDIGRV--T 132

Query: 440 LNKSIVFRYWVS 405
             K    ++WV+
Sbjct: 133 PYKDNPTKFWVA 144


>UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_7,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 853

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -1

Query: 219 ILYFYNHKFRQDYTIKNINRDKQYLIYS 136
           + YF+N++F Q  T +N+N + QY+IYS
Sbjct: 312 LTYFHNNQFIQGITEQNLNSNLQYIIYS 339


>UniRef50_Q02AK2 Cluster: Glycoside hydrolase, family 29
           (Alpha-L-fucosidase) precursor; n=1; Solibacter usitatus
           Ellin6076|Rep: Glycoside hydrolase, family 29
           (Alpha-L-fucosidase) precursor - Solibacter usitatus
           (strain Ellin6076)
          Length = 510

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +2

Query: 272 DYCGTSSYYKMGVGKPQNYMYMKNVFDKICDMCPFRNCSIIVELPIPSNGK 424
           D C    +YK G      Y   KNV D +CD+   RN ++++ +P+P++GK
Sbjct: 328 DTCIGGWHYKKGA----KYKTGKNVVDLLCDIVS-RNGNLMLNVPLPNSGK 373


>UniRef50_Q8IIH3 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2147

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -1

Query: 261 YNYWNCKF-VHYYDCILYFYNHKFRQDYTIKNINRDKQYLIYSQFD 127
           YNY    F V YY+   Y YN K   +Y I  +N  +  L++  F+
Sbjct: 655 YNYNRSYFKVPYYNMKYYLYNQKSYDEYNISGVNLFRNLLLFVHFN 700


>UniRef50_A6GDF6 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 426

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +1

Query: 745 CGIFYNSYCN-RKMFFDIIIQNTILQ 819
           CG+FY S+ N  ++ FD+I QNT+LQ
Sbjct: 133 CGLFYASFANFGELAFDLIWQNTVLQ 158


>UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma
           gondii|Rep: Ribosomal protein S3 - Toxoplasma gondii
          Length = 224

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 243 KFVHYYDCILYFYNHKFRQDYTIKNINRDKQYLIYSQFDN-RRQEQKF 103
           KF    +CI YFYN+  +    IK IN  K+  IY + DN    +QK+
Sbjct: 68  KFQLNINCIFYFYNYFLKLKIFIKEINNIKR--IYKKIDNLNNLKQKY 113


>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein
           PF07_0118; n=3; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0118 - Plasmodium falciparum (isolate 3D7)
          Length = 5561

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -1

Query: 249 NCKFVHYYDCILYFYNHKFRQDYTIKNINRDKQYLIYSQFDNRRQEQ 109
           N +FV  Y  I  FY++ F     I N ++D QY  YS ++N  + Q
Sbjct: 401 NIQFVLPYKPIRMFYSNNFLFFVNIINKSKDLQYFTYSIYNNNHKNQ 447


>UniRef50_Q23QF8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 899

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 28  IKSIKKKLHTLHIMYLTHTRMHTIVKLLFLASVVK 132
           +K + K    L+I Y  +T+ HT+ K+LF+AS++K
Sbjct: 86  MKDVNKIKDKLNIEYWYNTQDHTLSKILFIASIIK 120


>UniRef50_A0BWF5 Cluster: Chromosome undetermined scaffold_132, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_132, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1574

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -1

Query: 231  YYDCILYFYNHKFRQDYTIKNINRDKQYLIYSQFDNRRQEQKFDNSMHACVR 76
            +Y CIL  +     Q + +KNI +  Q+  Y++    + E   DN   +C++
Sbjct: 957  FYYCILIIWRFLCYQRWNLKNIQQKHQHNYYTELIRCKAEINQDNQKQSCIK 1008


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,612,767
Number of Sequences: 1657284
Number of extensions: 16413317
Number of successful extensions: 37272
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37239
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)