Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0001
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 170 2e-41
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 157 1e-37
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 149 6e-35
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 140 2e-32
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 134 2e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 130 2e-29
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 116 5e-25
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 108 8e-23
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 105 6e-22
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 101 2e-20
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 90 3e-17
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 89 9e-17
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 87 3e-16
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 87 4e-16
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 85 2e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 79 6e-14
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 77 3e-13
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 76 5e-13
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 73 4e-12
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 73 5e-12
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 73 5e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 6e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 70 3e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 69 6e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 69 1e-10
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 68 1e-10
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 68 1e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 68 1e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 67 2e-10
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 67 2e-10
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 65 1e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 64 2e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 63 5e-09
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 62 9e-09
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 60 3e-08
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 60 3e-08
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 3e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 55 1e-06
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 54 3e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 6e-06
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 52 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 1e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 49 7e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 7e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 9e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 6e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 9e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 45 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.003
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.006
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.011
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.018
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.018
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 39 0.074
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.13
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 38 0.17
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.23
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.23
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 38 0.23
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.30
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.30
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 37 0.39
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.39
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 37 0.39
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.69
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 36 0.91
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.91
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.6
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.6
UniRef50_Q0RU84 Cluster: Putative oxidoreductase; n=1; Frankia a... 34 2.1
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.1
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.9
UniRef50_Q60846 Cluster: Tumor necrosis factor receptor superfam... 33 6.4
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 8.5
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 32 8.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 170 bits (414), Expect = 2e-41
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGA
Sbjct: 95 DFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGA 154
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHT 255
IILAKLS++PVRRGYWGNKIGKPHT
Sbjct: 155 IILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 122 bits (295), Expect = 5e-27
Identities = 56/79 (70%), Positives = 60/79 (75%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 434
VPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF
Sbjct: 180 VPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKA 239
Query: 435 XXXXXXXXXXXLTPDLWRD 491
LTPDLW++
Sbjct: 240 TFDAISKTYSYLTPDLWKE 258
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 157 bits (382), Expect = 1e-37
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
DFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRGA
Sbjct: 35 DFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGA 94
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHT 255
IILAKLS++PV RGYWGNKIGKPHT
Sbjct: 95 IILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 39.5 bits (88), Expect = 0.056
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAP 314
VPCKVTG+C SV V LIPAP
Sbjct: 120 VPCKVTGRCSSVLVHLIPAP 139
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 149 bits (360), Expect = 6e-35
Identities = 64/85 (75%), Positives = 78/85 (91%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGA
Sbjct: 69 DYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGA 127
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHT 255
II+ KLS++P+RRGYWG +G PHT
Sbjct: 128 IIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 108 bits (260), Expect = 8e-23
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 434
VP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TLGNF
Sbjct: 153 VPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVKA 212
Query: 435 XXXXXXXXXXXLTPDLWRDIP 497
LTP+LW + P
Sbjct: 213 AFAAASLTYGILTPNLWAERP 233
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 140 bits (340), Expect = 2e-32
Identities = 66/76 (86%), Positives = 71/76 (93%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 208 PVRRGYWGNKIGKPHT 255
P+R+GYWGNKIGKP+T
Sbjct: 108 PLRQGYWGNKIGKPNT 123
Score = 113 bits (272), Expect = 3e-24
Identities = 53/83 (63%), Positives = 58/83 (69%)
Frame = +3
Query: 243 KATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
K VPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T +LGN
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGN 179
Query: 423 FXXXXXXXXXXXXXXLTPDLWRD 491
F LTPDLW++
Sbjct: 180 FAKATFDTISKTYTYLTPDLWKE 202
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 134 bits (323), Expect = 2e-30
Identities = 59/85 (69%), Positives = 73/85 (85%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
+ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G+
Sbjct: 85 EHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGS 144
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHT 255
+ILAKL+++PVRRGYWG+K+G+PHT
Sbjct: 145 MILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 88.2 bits (209), Expect = 1e-16
Identities = 43/79 (54%), Positives = 50/79 (63%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 434
+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLGN
Sbjct: 170 IPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGNSVKA 229
Query: 435 XXXXXXXXXXXLTPDLWRD 491
LTPDLW +
Sbjct: 230 TYEALKNSYGFLTPDLWAE 248
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 130 bits (315), Expect = 2e-29
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AK
Sbjct: 74 PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAK 133
Query: 196 LSVLPVRRGYWGNKIGKPHT 255
LSV+P+RRGYWG +G+PH+
Sbjct: 134 LSVIPIRRGYWGTNLGQPHS 153
Score = 93.9 bits (223), Expect = 2e-18
Identities = 45/79 (56%), Positives = 53/79 (67%)
Frame = +3
Query: 264 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 443
K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 157 KTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFV 216
Query: 444 XXXXXXXXLTPDLWRDIPL 500
LTP+LW + PL
Sbjct: 217 AIGNTYGFLTPNLWAEQPL 235
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 116 bits (278), Expect = 5e-25
Identities = 55/86 (63%), Positives = 59/86 (68%)
Frame = +3
Query: 234 QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 413
Q R KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Query: 414 LGNFXXXXXXXXXXXXXXLTPDLWRD 491
LGNF LTPDLW++
Sbjct: 175 LGNFAKATFDAISKTYSYLTPDLWKE 200
Score = 62.5 bits (145), Expect = 7e-09
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 93
DFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 95 DFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 108 bits (260), Expect = 8e-23
Identities = 50/85 (58%), Positives = 59/85 (69%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGA
Sbjct: 56 DLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGA 115
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHT 255
I AK ++ PVR G W GKPHT
Sbjct: 116 IARAKCAIRPVRLGLWDGAQGKPHT 140
Score = 79.0 bits (186), Expect = 7e-14
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 434
V CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T NF
Sbjct: 141 VSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTENFAKA 200
Query: 435 XXXXXXXXXXXLTPDLWRDIP 497
+ PD W + P
Sbjct: 201 SIAALEATSSMILPDQWEEKP 221
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 105 bits (253), Expect = 6e-22
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 79 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 255
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 102 bits (244), Expect = 7e-21
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3
Query: 213 PKRLLG*QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 392
P+ G + RK VP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTS
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTS 165
Query: 393 ARGSTGTLG 419
ARG T T G
Sbjct: 166 ARGHTATWG 174
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 101 bits (241), Expect = 2e-20
Identities = 51/86 (59%), Positives = 55/86 (63%)
Frame = +3
Query: 234 QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 413
Q R KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T T
Sbjct: 115 QTRAGQWTRFKVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTAT 173
Query: 414 LGNFXXXXXXXXXXXXXXLTPDLWRD 491
LGNF LTPDLW++
Sbjct: 174 LGNFAKATFDAISKIYSYLTPDLWKE 199
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 93
DFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 95 DFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 90.2 bits (214), Expect = 3e-17
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +3
Query: 306 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 485
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF LTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 486 RD 491
++
Sbjct: 61 KE 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 88.6 bits (210), Expect = 9e-17
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 135
DFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 70 DFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 87.0 bits (206), Expect = 3e-16
Identities = 45/79 (56%), Positives = 52/79 (65%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 434
VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGNF
Sbjct: 156 VPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNFTKA 213
Query: 435 XXXXXXXXXXXLTPDLWRD 491
L PDL ++
Sbjct: 214 IFDTISKTHSYLIPDLQKE 232
Score = 56.0 bits (129), Expect = 6e-07
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +1
Query: 49 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 228
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 229 GNKIGKPH 252
G ++ +PH
Sbjct: 148 GKRL-EPH 154
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 86.6 bits (205), Expect = 4e-16
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +3
Query: 210 SPKRLLG*QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 389
S ++ LG + K V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 390 SARGSTGTLGNF 425
SARG T +L F
Sbjct: 61 SARGCTASLDYF 72
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/80 (52%), Positives = 50/80 (62%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 434
V CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF
Sbjct: 163 VSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDKA 220
Query: 435 XXXXXXXXXXXLTPDLWRDI 494
LTP+LW+ +
Sbjct: 221 TFNAISNTYSYLTPNLWKGL 240
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = +1
Query: 4 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 171
FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ ATAI
Sbjct: 95 FFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.4 bits (187), Expect = 6e-14
Identities = 46/89 (51%), Positives = 56/89 (62%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
D FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+
Sbjct: 83 DIFLGAALKDEVLKSLPEQKGTRVGQY--YKA----GDYNGHVITGLD---EVANTIQRV 133
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHTSLAR 267
IIL KL ++PV RGY G+K KPHT L +
Sbjct: 134 IILTKLPIVPVWRGYCGSKTSKPHTVLCK 162
Score = 72.1 bits (169), Expect = 9e-12
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = +3
Query: 228 G*QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 401
G + K V CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 77.0 bits (181), Expect = 3e-13
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 132
DFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 23 DFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 37.9 bits (84), Expect = 0.17
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = +2
Query: 206 YQSEEVTGVTR*ESHTRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDGWCTGLL 385
++++ + G ++ RPLQG R + +W+ + + + EA+ D W LL
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLL 150
Query: 386 HVSSWFNWHLGKFC*SHIRC 445
H+S + H G+ H+ C
Sbjct: 151 HLSQGLHCHPGQLRQRHLGC 170
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 111 RQQRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPKRLLG*QDRKATHVP 260
R Y EV QG H R ++P A+ +RLLG QDR+A H P
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRP 108
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 76.2 bits (179), Expect = 5e-13
Identities = 43/89 (48%), Positives = 55/89 (61%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHTSLAR 267
IIL + S+ G+ GNKI KPHT R
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCR 83
Score = 62.1 bits (144), Expect = 9e-09
Identities = 37/78 (47%), Positives = 42/78 (53%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 434
V C+VT SV V I APRGT I+SAPVPKKLL+MA + D + ARG T L N
Sbjct: 80 VSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN-VIK 138
Query: 435 XXXXXXXXXXXLTPDLWR 488
LT D WR
Sbjct: 139 ATYDISKTYVSLTSDFWR 156
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 73.3 bits (172), Expect = 4e-12
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = -3
Query: 237 LVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLF 58
LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L
Sbjct: 29 LVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLL 88
Query: 57 LYRHDLKNLIIQGRAEEEI 1
L HDL++ ++Q A+EEI
Sbjct: 89 LDGHDLQHFVLQRAAQEEI 107
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 72.9 bits (171), Expect = 5e-12
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = +3
Query: 243 KATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
++T V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T TL N
Sbjct: 55 RSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYN 114
Query: 423 F 425
F
Sbjct: 115 F 115
Score = 65.7 bits (153), Expect = 7e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 55 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 198
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 72.9 bits (171), Expect = 5e-12
Identities = 33/85 (38%), Positives = 55/85 (64%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
+ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I+ A
Sbjct: 101 NILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGIKAA 160
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHT 255
+ AKL++ +RRGYW + GKP+T
Sbjct: 161 LRKAKLAITKIRRGYWEIEEGKPNT 185
Score = 60.1 bits (139), Expect = 4e-08
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +3
Query: 234 QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 413
++ K + K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T +
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKS 238
Query: 414 LGNFXXXXXXXXXXXXXXLTPDLW 485
N +TPD W
Sbjct: 239 SFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 6e-12
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AK
Sbjct: 55 PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAK 114
Query: 196 LSVLPVR--RGYWGNKIGKPHT 255
LS++ VR G W G PH+
Sbjct: 115 LSLIKVRVGCGSWECGCGSPHS 136
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 425
+P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T T NF
Sbjct: 137 IPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = -3
Query: 252 VWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALS 73
V L+ + TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+
Sbjct: 105 VRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLT 164
Query: 72 GTCLFLYRHDLKNLIIQ 22
+ L L R D+ N I+Q
Sbjct: 165 SSGLLLDRLDVHNFILQ 181
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 69.3 bits (162), Expect = 6e-11
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 186
+L P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 41 YLIPDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAID 100
Query: 187 LAKLSVLPVRR--GYWGNKIGKPHT 255
AKL+++ ++R G W GKPHT
Sbjct: 101 NAKLNIIEIKRGCGSWECGCGKPHT 125
Score = 53.2 bits (122), Expect = 4e-06
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 425
+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N+
Sbjct: 126 LPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVNY 182
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ IR AI AK
Sbjct: 31 PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAK 90
Query: 196 LSVLPVRR--GYWGNKIGKPHTSL 261
L+++PV R G W + G P TS+
Sbjct: 91 LNMIPVMRGNGSWESG-GGPGTSV 113
Score = 55.6 bits (128), Expect = 8e-07
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +3
Query: 249 THVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 425
T VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+
Sbjct: 111 TSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 174
D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 99 DHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 68.1 bits (159), Expect = 1e-10
Identities = 30/56 (53%), Positives = 44/56 (78%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+ +
Sbjct: 167 VPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTMNS 222
Score = 62.1 bits (144), Expect = 9e-09
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 196 LSVLPVRRG 222
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK
Sbjct: 52 PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAK 111
Query: 196 LSVLPVRR--GYWGNKIGKPHT 255
++++PVRR G W G+PH+
Sbjct: 112 MNIIPVRRGCGSWQCTCGEPHS 133
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 425
+P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T NF
Sbjct: 134 LPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENF 190
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +1
Query: 25 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 204
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 205 LPVRR--GYWGNKIGKPHT 255
+ ++R G W + +PH+
Sbjct: 122 IEIKRGCGSWECRCRRPHS 140
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +3
Query: 240 RKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 419
R+ VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTV 195
Query: 420 NF 425
NF
Sbjct: 196 NF 197
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +1
Query: 10 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 189
L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +
Sbjct: 44 LVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDI 103
Query: 190 AKLSVLPVRR--GYWGNKIGKPHTSLARS 270
AKL+++ V R G W G+PHT R+
Sbjct: 104 AKLNIIDVSRGCGSWECGCGRPHTVALRT 132
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 425
V + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T NF
Sbjct: 128 VALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 64.9 bits (151), Expect = 1e-09
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 413
VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 148 VPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 196 LSVLPVRRG 222
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 64.5 bits (150), Expect = 2e-09
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ +
Sbjct: 27 DFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLS 84
Query: 181 IILAKL-SVLPVRRGYWGNKIGKPHTSLARSPASV 282
+ L S LP R Y GN I KP R+ S+
Sbjct: 85 SWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 51.6 bits (118), Expect = 1e-05
Identities = 38/98 (38%), Positives = 49/98 (50%)
Frame = +3
Query: 198 VSSTSPKRLLG*QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 377
+SS P+ G RK T+ PCK TG S++ L P IVS VP+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKPTY-PCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 378 DCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRD 491
CYTSAR T TLGN TP+LW++
Sbjct: 145 SCYTSARSYTVTLGNIAKATFDAVSKTSHS-TPNLWKE 181
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 62.9 bits (146), Expect = 5e-09
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = -2
Query: 424 KFPKVPVEPRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTCVA 245
K PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G C A
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCGLCGA 71
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 62.1 bits (144), Expect = 9e-09
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+ A+
Sbjct: 156 DFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRT 215
Query: 181 IILAKLSV 204
+L+ + V
Sbjct: 216 NVLSIILV 223
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 60.5 bits (140), Expect = 3e-08
Identities = 39/85 (45%), Positives = 46/85 (54%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA + A
Sbjct: 54 EFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRA 107
Query: 181 IILAKLSVLPVRRGYWGNKIGKPHT 255
I L + + GY GNKIG PHT
Sbjct: 108 ITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 40.3 bits (90), Expect = 0.032
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 255 VPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 374
+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 132 IPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/69 (42%), Positives = 45/69 (65%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +AK
Sbjct: 97 PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAK 156
Query: 196 LSVLPVRRG 222
L+++ V RG
Sbjct: 157 LNIIEVDRG 165
Score = 56.0 bits (129), Expect = 6e-07
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +3
Query: 264 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVN 234
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 13 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 192
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 193 KLSVL--PVRRGY 225
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
+P ++ + G+ +V + PA GTG+V+ + +L++AG Q+ G+ L N
Sbjct: 142 LPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNALNN 197
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +1
Query: 55 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYW 228
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V R G W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 229 GNKIGKPHT 255
G PH+
Sbjct: 132 ECACGAPHS 140
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
+P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T T N
Sbjct: 141 IPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKTKMN 196
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/88 (37%), Positives = 46/88 (52%)
Frame = +1
Query: 16 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 196 LSVLPVRRGYWGNKIGKPHTSLARSPAS 279
+ VR G I PH ++ R AS
Sbjct: 73 KQL--VRIPITGTTI--PHDTIGRFGAS 96
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 249 THVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 404
T +P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 83 TTIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 201
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 202 VLPV 213
++ V
Sbjct: 72 LISV 75
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 249 THVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
T +P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 80 TTIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+ A+
Sbjct: 22 DFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRT 81
Query: 181 IIL 189
IIL
Sbjct: 82 IIL 84
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 19 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 198
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 199 SVLPVRR 219
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 267 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 416
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+ +
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM 173
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 1 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 181 IILAKLSVLPV 213
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 35.5 bits (78), Expect = 0.91
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
+P +V K + ++PA GTG+++ + +L++AGVQ+ G L N
Sbjct: 584 IPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 49.2 bits (112), Expect = 7e-05
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +3
Query: 318 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 425
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 7e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 201
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 202 VLPVR 216
+ V+
Sbjct: 138 MYKVK 142
Score = 39.9 bits (89), Expect = 0.042
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 264 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 416
+V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G +L
Sbjct: 152 EVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL 202
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 208 PV 213
+
Sbjct: 71 KI 72
Score = 46.4 bits (105), Expect = 5e-04
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +3
Query: 243 KATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
K +P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 208 PV 213
V
Sbjct: 77 EV 78
Score = 40.7 bits (91), Expect = 0.024
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 416
+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L
Sbjct: 85 IPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL 138
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 7 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 186
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 187 LAKLSVLPV 213
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 39.5 bits (88), Expect = 0.056
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 243 KATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 401
+ T VP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 109 RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 208 --PVRRGYWGNKI-GKPHTS 258
PV G ++I G+ TS
Sbjct: 79 TVPVENGTIPHEIVGENSTS 98
Score = 37.5 bits (83), Expect = 0.23
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 87 IPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 208 PV 213
V
Sbjct: 209 QV 210
Score = 39.1 bits (87), Expect = 0.074
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 243 KATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
K + P + G G+ V L PA GTG+++ + +L+MAGV++ GS L N
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNN 273
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 36.3 bits (80), Expect = 0.52
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3
Query: 216 KRLLG*QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 395
K L+ K+ +P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 396 RGSTGTLGN 422
GS L N
Sbjct: 144 LGSDNLLNN 152
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 9e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 208 PV 213
V
Sbjct: 246 TV 247
Score = 35.5 bits (78), Expect = 0.91
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 258 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
P + G G+ V L PA GTG+++ + +L+MAGV++ S L N
Sbjct: 256 PHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN 310
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 135
L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 75 LKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 13 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 192
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 193 KLSVL--PVRRG 222
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 13 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 192
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 193 KLSVLPVRR 219
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 33.5 bits (73), Expect = 3.7
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 267 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 119 VQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 201
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 202 VLPVRRG 222
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 208 PVRRGYWGNKIGK-PHTSLARSPASVV 285
V NKI PH S A+ V
Sbjct: 128 RVPL----NKINSIPHPMSGSSGAANV 150
Score = 41.9 bits (94), Expect = 0.011
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 204 STSPKRLLG*QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 383
S + K L+ K +P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 120 SDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNV 179
Query: 384 YTSARGSTGTLGN 422
+ GS L N
Sbjct: 180 LAKSLGSKSPLNN 192
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 25 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 204
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 205 LPV 213
+ +
Sbjct: 91 VKI 93
Score = 41.1 bits (92), Expect = 0.018
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 243 KATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 407
K +P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSS 150
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 201
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 202 VLPV 213
V+ V
Sbjct: 88 VIRV 91
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 407
VP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 98 VPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 208 PV 213
V
Sbjct: 104 RV 105
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 267 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 416
V G+ + V L PA GTG+++ + +L+ AGV D + GS +
Sbjct: 116 VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI 165
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 264 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 401
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.018
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 208 PV 213
V
Sbjct: 79 EV 80
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 249 THVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 422
TH+ V+G V VR PA GTG+++ + +L++AGV++ GS L N
Sbjct: 89 THITNGVSGGA-KVVVR--PAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.018
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 195
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 35.5 bits (78), Expect = 0.91
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
+P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 86 IPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.1 bits (87), Expect = 0.074
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
+P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 91 IPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.3 bits (85), Expect = 0.13
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +1
Query: 28 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 207
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 208 PVRRGYWGNKIGKPHTSLARSPASVV 285
V NK PH A+ AS V
Sbjct: 151 RVP---IINKSTVPHEQWAKFLASKV 173
Score = 36.7 bits (81), Expect = 0.39
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
VP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 160 VPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 37.9 bits (84), Expect = 0.17
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 315 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRD 491
RG + + + KKLL +A +QDCY AR + LGN+ LT DLW +
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTE 63
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 52 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 219
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.23
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 174
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 34.3 bits (75), Expect = 2.1
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 243 KATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 404
K +P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 37.5 bits (83), Expect = 0.23
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 255 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 407
+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 85 LPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
Score = 35.9 bits (79), Expect = 0.69
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 25 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 174
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.23
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 201
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 202 VLPVRR 219
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 183 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 85
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 174
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
Score = 32.3 bits (70), Expect = 8.5
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 216 KRLLG*QDRKATHVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 395
K L+ + + +P +V + L PA GTGIV+ + +L+MAGV++ +
Sbjct: 71 KNLITIESLEGDSIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGVKNIVAKS 130
Query: 396 RGSTGTL 416
GS +
Sbjct: 131 LGSNNPM 137
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 36.7 bits (81), Expect = 0.39
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +3
Query: 258 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGTLGNF 425
P ++ S+ LI AP T I+S VPK LL + A D SA G T LG
Sbjct: 145 PMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDALGRL 203
Query: 426 XXXXXXXXXXXXXXLTPDLW 485
LTPDLW
Sbjct: 204 AKTTFDAISKTYSCLTPDLW 223
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.39
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 22 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 201
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 202 VLPV 213
++ V
Sbjct: 81 MVRV 84
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 267 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 407
V G+ G+ V + PA GTGI++ + + ++ GV + GST
Sbjct: 95 VIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGST 141
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 36.7 bits (81), Expect = 0.39
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 276 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 407
K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.69
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 34 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 213
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 35.5 bits (78), Expect = 0.91
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 91 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT--SLA 264
++ V IG + H G + +++VA A+RG + L V GYW + G ++A
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTVA 61
Query: 265 RSPASVVP 288
S +VVP
Sbjct: 62 YSDVTVVP 69
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 0.91
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 52 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 219
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 19 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 198
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 199 SVLPVRR 219
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.6
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 10 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 189
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 190 AKLSVL 207
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 7 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 171
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q0RU84 Cluster: Putative oxidoreductase; n=1; Frankia alni
ACN14a|Rep: Putative oxidoreductase - Frankia alni
(strain ACN14a)
Length = 307
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 130 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTSLARSPASVVP 288
G V+ EV G +LA +V G W ++ P TS+AR PA+V P
Sbjct: 71 GTVVETGAEVTDLAPGTQVLAMSAVALTGVGTWSERVCLPRTSVARLPANVDP 123
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.1
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 19 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 198
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 199 SVLPVRR 219
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 34 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 180
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q60846 Cluster: Tumor necrosis factor receptor superfamily
member 8 precursor; n=5; Murinae|Rep: Tumor necrosis
factor receptor superfamily member 8 precursor - Mus
musculus (Mouse)
Length = 498
Score = 32.7 bits (71), Expect = 6.4
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = -2
Query: 331 TIPVPRGAGISRTVTEPHLPVTLQGTCVAFLSCYPSNLFGLVELTA*QG-**RL-EWQWR 158
T P PRG R P V G C A ++C P GLVE G R+ E Q
Sbjct: 55 TQPCPRGPAHCRKQCAPDYYVNEDGKCTACVTCLP----GLVEKAPCSGNSPRICECQPG 110
Query: 157 LPCCTSHPNQYDRC 116
+ CCT N RC
Sbjct: 111 MHCCTPAVNSCARC 124
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 32.3 bits (70), Expect = 8.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 373 TPAI*RSFLGTGADTIPVPRGAGISRTVTEP 281
TP + RS G GA T+P RG+G+ T T P
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAP 172
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 8.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 31 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 192
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 32.3 bits (70), Expect = 8.5
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 267 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 407
V GK G+ + L AP+GTGI++ + + ++ G++D + G++
Sbjct: 86 VYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTS 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,763,576
Number of Sequences: 1657284
Number of extensions: 13939289
Number of successful extensions: 35949
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 34452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35931
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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