Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30031
         (566 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E5U2 Cluster: Putative uncharacterized protein; n=1; ...    36   0.50 
UniRef50_Q7UEX2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  

>UniRef50_A2E5U2 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 601

 Score = 36.3 bits (80), Expect = 0.50
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -2

Query: 322 VTTTMLPGRCIKIYNNFYNILLLIXV-CSVLAHPHYSYPFT*NTRIYGNHFCLVPNVISV 146
           +T T++  RC  I NNF  + +L  V  SV+ H   +        IY ++ C++ N++S+
Sbjct: 107 ITNTII-SRCGNISNNFEVMTILSNVNISVINHSSNAVTEISFASIYKSNSCIIKNLVSI 165

Query: 145 NNDVSN 128
           NN V +
Sbjct: 166 NNSVES 171


>UniRef50_Q7UEX2 Cluster: Putative uncharacterized protein; n=1;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 392

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 331 QSRVTTTMLPGRCIKIYNNFYNILLLIXVCSV 236
           + RVTTT+LP R +++   F + L+L+ VCSV
Sbjct: 95  KDRVTTTLLPRRSVRL--QFVSALMLVMVCSV 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,076,861
Number of Sequences: 1657284
Number of extensions: 8027056
Number of successful extensions: 14082
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14080
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)