Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30027
         (323 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5PMS4 Cluster: Novel protein; n=3; Danio rerio|Rep: No...    33   1.2  
UniRef50_Q1G8Y7 Cluster: Transcriptional regulator; n=2; Lactoba...    32   2.8  
UniRef50_A4BIY8 Cluster: Predicted glycosyltransferase; n=1; Rei...    31   4.9  
UniRef50_Q9BP34 Cluster: Phospholipase D; n=6; Sophophora|Rep: P...    31   4.9  
UniRef50_Q5A992 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_P08478 Cluster: Peptidyl-glycine alpha-amidating monoox...    30   8.6  

>UniRef50_A5PMS4 Cluster: Novel protein; n=3; Danio rerio|Rep: Novel
           protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 348

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 301 ERIGSTVLLPQMSYVSVRSLGQ-PLYNETST 212
           ER+G+   LP+ +Y+ V S  Q P+YN TST
Sbjct: 195 ERLGACACLPKWAYIPVTSRSQLPVYNNTST 225


>UniRef50_Q1G8Y7 Cluster: Transcriptional regulator; n=2;
           Lactobacillus delbrueckii subsp. bulgaricus|Rep:
           Transcriptional regulator - Lactobacillus delbrueckii
           subsp. bulgaricus (strain ATCC 11842 / DSM20081)
          Length = 291

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 88  LTVYTALNFSRLSDRQHIRLPEVRQH 165
           LTV   +NF+R +DR H+  P V QH
Sbjct: 10  LTVCETMNFTRAADRLHVTQPAVSQH 35


>UniRef50_A4BIY8 Cluster: Predicted glycosyltransferase; n=1;
           Reinekea sp. MED297|Rep: Predicted glycosyltransferase -
           Reinekea sp. MED297
          Length = 530

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -2

Query: 313 ASKPERIGSTVLLPQMSYVSVRSLGQPLYNETSTSCLKAHHETFIIN 173
           A+ PE +  T+    ++ +S R+ G P  NE   S +    E+F+++
Sbjct: 102 ANMPEEVAKTIRPRVLTVISTRTGGTPQTNEDMMSAISEQFESFVLH 148


>UniRef50_Q9BP34 Cluster: Phospholipase D; n=6; Sophophora|Rep:
           Phospholipase D - Drosophila melanogaster (Fruit fly)
          Length = 1278

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = -2

Query: 304 PERIGSTVLLPQMSYVSVRSLGQPLYNETSTSCLKAHHETF-IINEYYVV*LPVAGYAGG 128
           P R  S V +  +S V ++ L   LYN  + S  ++HHET   +    V  +P  G  G 
Sbjct: 300 PNRPESLVTVENLS-VRIKQLEDYLYNLLNISLYRSHHETLNFVEVSNVSFVPGMGIKGK 358

Query: 127 Q-IVLKN*GQCR 95
           + ++LK  G  R
Sbjct: 359 EGVILKRTGSTR 370


>UniRef50_Q5A992 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 102

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -2

Query: 310 SKPERIGSTVLLPQMSYVSVRSLGQPLYNETSTSCLKAHHETFIINEYYVV*LPVAGYAG 131
           +KP  I    +LP      +R L  PL N      +  H  T I NE +   L V    G
Sbjct: 8   NKPWTISKPEVLPTYKAAQLRWLKAPLSNSGFFKTISPHSNTLIGNECFSFSLTVFKIPG 67

Query: 130 GQIVL 116
            ++VL
Sbjct: 68  NKVVL 72


>UniRef50_P08478 Cluster: Peptidyl-glycine alpha-amidating
           monooxygenase A precursor (PAM-A) (Peptidyl-glycine
           alpha-amidating monooxygenase I) (Peptide C-terminal
           alpha-amidating enzyme I) (AE-I) [Includes:
           Peptidylglycine alpha- hydroxylating monooxygenase A (EC
           1.14.17.3) (PHM-A); Peptidyl-alpha- hydroxyglycine
           alpha-amidating lyase A (EC 4.3.2.5)
           (Peptidylamidoglycolate lyase-A) (PAL-A)]; n=24;
           Euteleostomi|Rep: Peptidyl-glycine alpha-amidating
           monooxygenase A precursor (PAM-A) (Peptidyl-glycine
           alpha-amidating monooxygenase I) (Peptide C-terminal
           alpha-amidating enzyme I) (AE-I) [Includes:
           Peptidylglycine alpha- hydroxylating monooxygenase A (EC
           1.14.17.3) (PHM-A); Peptidyl-alpha- hydroxyglycine
           alpha-amidating lyase A (EC 4.3.2.5)
           (Peptidylamidoglycolate lyase-A) (PAL-A)] - Xenopus
           laevis (African clawed frog)
          Length = 935

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 267 CHTYQLEVWDSRYIMRLRPHVSKLTMRHSL 178
           C +Y+L V D  Y++  RPH +  T  H L
Sbjct: 77  CKSYRLPVDDEAYVVDFRPHANMDTAHHML 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,971,361
Number of Sequences: 1657284
Number of extensions: 5053249
Number of successful extensions: 11293
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11292
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)