Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30025
         (309 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I2C9 Cluster: Putative uncharacterized protein PFA073...    35   0.41 
UniRef50_Q16L91 Cluster: Predicted protein; n=1; Aedes aegypti|R...    31   6.6  

>UniRef50_Q8I2C9 Cluster: Putative uncharacterized protein PFA0735w;
           n=2; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFA0735w - Plasmodium falciparum
           (isolate 3D7)
          Length = 293

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -2

Query: 293 LLKTFKMKTIYFVLLISVCAVSAIYLPDDSNSADLDKYKSESFGSKLY 150
           +LK F  K I FV++I +  +  +YLP+D N+       SE +  KLY
Sbjct: 9   ILKFFLFKCI-FVVIIGILCMGILYLPNDRNNKVSSIKSSEKYQRKLY 55


>UniRef50_Q16L91 Cluster: Predicted protein; n=1; Aedes aegypti|Rep:
           Predicted protein - Aedes aegypti (Yellowfever mosquito)
          Length = 447

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = -2

Query: 257 VLLISVCAVSAIYLPDDSNSADLDKYKSESFGSKLYSE 144
           VLL++VC VS++++P+D     ++ Y  ES G+++  E
Sbjct: 14  VLLLTVCVVSSMHIPEDMEI--MEGYDLESAGTEINPE 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,323,457
Number of Sequences: 1657284
Number of extensions: 1741624
Number of successful extensions: 5230
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5230
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)