Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30045
(396 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 128 3e-29
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 113 1e-24
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 96 2e-19
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 96 3e-19
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 89 4e-17
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 81 8e-15
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 78 7e-14
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 76 2e-13
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 71 1e-11
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 69 2e-11
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 69 3e-11
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 69 4e-11
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 66 2e-10
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 66 3e-10
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 62 3e-09
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 58 5e-08
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 56 2e-07
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 54 8e-07
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 54 1e-06
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 52 4e-06
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 50 1e-05
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 49 3e-05
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 48 9e-05
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 45 5e-04
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 41 0.008
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 41 0.008
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 41 0.008
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 39 0.040
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 38 0.053
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 38 0.093
UniRef50_Q337N5 Cluster: Expressed protein; n=4; Oryza sativa|Re... 35 0.66
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 34 0.87
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 34 1.1
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 33 1.5
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 32 4.6
UniRef50_Q9HNN4 Cluster: UPF0447 protein VNG2021C; n=1; Halobact... 31 6.1
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 31 8.1
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 128 bits (310), Expect = 3e-29
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MKFN VTS R KNRKRHF+APSHI R MSSPLSKELR K+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 217 HYKGQQVGKVMQVIVK 264
HYKGQQ+GKV+QV K
Sbjct: 61 HYKGQQIGKVVQVYRK 76
Score = 72.5 bits (170), Expect = 3e-12
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
YRKK+V+YIER+ R ANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 74 YRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 113 bits (272), Expect = 1e-24
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MKFN VTS R K HF+APSHI R MSSPLSKELR K+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 217 HYKGQQVGKVMQVIVKSLLYTLR 285
HY+GQQ+GKV+QV K + ++
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIK 83
Score = 61.3 bits (142), Expect = 7e-09
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
YRKK+V+YI+++ R ANG T VGIHPSK VI +LK+ +DRK IL+
Sbjct: 74 YRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILE 119
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 96.3 bits (229), Expect = 2e-19
Identities = 42/85 (49%), Positives = 65/85 (76%)
Frame = +1
Query: 1 VLSRVVLGKSDRMKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMP 180
+L++++ +MKFNKQ++S+RRK RK HF+AP+ + R MSS LSKELR K+ +++P
Sbjct: 18 LLTQIIFSPFSKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALP 77
Query: 181 IRKDDEVQVVRGHYKGQQVGKVMQV 255
+RKDDEV + RGH G++ GKV+++
Sbjct: 78 VRKDDEVLICRGHNHGRE-GKVVKI 101
Score = 62.1 bits (144), Expect = 4e-09
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3
Query: 258 RKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
RK+F +Y+ER+ R ANG + ++GIHPS ++ KLK++K+RK ILD
Sbjct: 103 RKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKILD 148
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 95.9 bits (228), Expect = 3e-19
Identities = 46/64 (71%), Positives = 53/64 (82%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK N +VTSSRRK RK HF+APS + RV MS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 217 HYKG 228
YKG
Sbjct: 61 SYKG 64
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 88.6 bits (210), Expect = 4e-17
Identities = 44/70 (62%), Positives = 53/70 (75%)
Frame = +1
Query: 46 NKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYK 225
N + SSRRK+R HF+APS RV +S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 226 GQQVGKVMQV 255
G++ GKV V
Sbjct: 65 GRE-GKVTSV 73
Score = 52.0 bits (119), Expect = 4e-06
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
YR K+ +++ERI R +NG + + +HPS VI KL ++KDR+AIL+
Sbjct: 74 YRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILE 120
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 81.0 bits (191), Expect = 8e-15
Identities = 40/72 (55%), Positives = 54/72 (75%)
Frame = +1
Query: 40 KFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGH 219
K + V+S RRK RK +F+APS RV +S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 220 YKGQQVGKVMQV 255
KGQ+ GK+ V
Sbjct: 63 KKGQE-GKISSV 73
Score = 53.6 bits (123), Expect = 1e-06
Identities = 21/46 (45%), Positives = 33/46 (71%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAIL 392
YR KF V ++++ + NGA+ + +HPSK VI KL ++KDRKA++
Sbjct: 74 YRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALI 119
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 77.8 bits (183), Expect = 7e-14
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK + +V+S RRK R+ APS++ MS+ LSK+LR K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 217 HYKGQQVGKVMQVIVK 264
+KG + GKV V K
Sbjct: 61 THKGTK-GKVSSVYRK 75
Score = 45.6 bits (103), Expect = 4e-04
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAIL 392
YRK++ + IE++ R ANG + I S+C+I K +N+DRK +L
Sbjct: 73 YRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLL 118
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 76.2 bits (179), Expect = 2e-13
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK++ VTSSRRK RK HF+APS R MS+ LS EL+ + ++PIR +DEV+V RG
Sbjct: 20 MKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRG 79
Query: 217 HYKGQQVGKVMQVIVK 264
+K ++ GKV+QV K
Sbjct: 80 SFKNRE-GKVVQVYRK 94
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 70.5 bits (165), Expect = 1e-11
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MKFN +V+S+ K RK ++AP+ + MS+ LSKELR K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 217 HYKGQQVGKVMQV 255
H K GKV V
Sbjct: 61 HQK--VAGKVTAV 71
Score = 47.2 bits (107), Expect = 1e-04
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 258 RKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAIL 392
R K+V+ I+++ + ANG T V I PS +I KL +NKDR+A L
Sbjct: 73 RSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYL 117
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 69.3 bits (162), Expect = 2e-11
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +1
Query: 109 IXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVIV-KSLLYTLR 285
+ + MS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QV K +++ R
Sbjct: 43 VIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKR 101
Query: 286 GFXEXXPMVQQH 321
E P+ H
Sbjct: 102 ISHEKIPIGFPH 113
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 68.9 bits (161), Expect = 3e-11
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
YR+++V+++ERI R NG+T VGIHPSK V+ KLK++KDRKAILD
Sbjct: 83 YRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILD 129
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +1
Query: 178 PIRKDDEVQVVRGHYKGQQVGKVMQV 255
P+RKDDEVQVVRG YKG++ GKV+QV
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQV 82
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 68.5 bits (160), Expect = 4e-11
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK N VT+SRRK RK +F+A + MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 217 HYKGQQVGKVMQV 255
+KG GKV++V
Sbjct: 61 GHKG--TGKVVEV 71
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 66.5 bits (155), Expect = 2e-10
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +1
Query: 58 TSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQV 237
+S RK RK F+AP H + MS+ L ELR KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 238 GKVMQVIVKSLLYTLRG 288
G+V++V +K L + G
Sbjct: 65 GEVVEVDLKRLRIYVEG 81
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 65.7 bits (153), Expect = 3e-10
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAI 389
YRKK+V+YIE + + ANG T +VGIHPSK VI +LK++KDRK I
Sbjct: 56 YRKKYVIYIEWVQQEKANGTTVHVGIHPSKAVITRLKLDKDRKKI 100
Score = 53.2 bits (122), Expect = 2e-06
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +1
Query: 148 LRXKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVIVK 264
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QV K
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRK 58
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 62.5 bits (145), Expect = 3e-09
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
M F K + RK RK F+AP H+ R MS+ LSKEL+ K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 217 HYKGQQVGKVMQVIVK 264
+KG + G+V++V +K
Sbjct: 59 DFKGLE-GEVIKVDLK 73
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 58.4 bits (135), Expect = 5e-08
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = +1
Query: 70 RKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 249
RK RK +AP H R M SPLSKELR K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 250 QV 255
+
Sbjct: 82 DI 83
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 56.0 bits (129), Expect = 2e-07
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 KQVTSSRRKNRKRH-FSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYK 225
K +S K RKR + AP HI + +PLS EL+ K +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 226 GQQVGKVMQVIVK 264
G + GKV V VK
Sbjct: 63 GHE-GKVTSVDVK 74
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 54.4 bits (125), Expect = 8e-07
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 49 KQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKG 228
KQ TSSRRK RK HF+ R+ S+ LS+ELR ++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 229 QQ 234
++
Sbjct: 66 KE 67
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 53.6 bits (123), Expect = 1e-06
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK+ VT SRRKNRKR F + + LSKE++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 217 HYKGQQVGKVMQV 255
+KG + GKV+Q+
Sbjct: 61 DFKG-KTGKVIQI 72
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 52.0 bits (119), Expect = 4e-06
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +1
Query: 58 TSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQV 237
+S RK K AP H R +++PLSK+L+ + ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 238 GKVMQVIVK 264
GKV +V K
Sbjct: 66 GKVTRVDYK 74
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 261 KKFVVYIERIXRXXANGATAYVGIHPSKCVIVKL-KMNKDRKAILD 395
K+ +Y++ +G Y IHPSK VIV+L + +K R A +D
Sbjct: 74 KRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAID 119
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 50.4 bits (115), Expect = 1e-05
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
+K N ++S +K RK F+A +S+ L+KE VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 217 HYKGQQVGKVMQV 255
+ G++ GKV+ V
Sbjct: 62 KFAGRE-GKVIAV 73
Score = 46.4 bits (105), Expect = 2e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 273 VYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
+ ++ R NG T +V +HPS C+I KLKM+K RK +++
Sbjct: 80 IVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIE 120
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 49.2 bits (112), Expect = 3e-05
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +1
Query: 49 KQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKG 228
+ V+ RK RK ++AP HI + M + LS+ L ++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 229 QQVGKVMQV 255
+ GKV V
Sbjct: 66 TE-GKVQSV 73
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 47.6 bits (108), Expect = 9e-05
Identities = 22/67 (32%), Positives = 43/67 (64%)
Frame = +1
Query: 55 VTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQ 234
++S K RK ++ P+H+ +++ LS++L ++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 235 VGKVMQV 255
GKV++V
Sbjct: 62 -GKVVEV 67
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 45.2 bits (102), Expect = 5e-04
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +1
Query: 61 SSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVG 240
+++ +NR+ + A + + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 241 KVMQVIVKSLLYTLRG 288
KV V +S + G
Sbjct: 61 KVSHVDTESGSVAIEG 76
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 41.1 bits (92), Expect = 0.008
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +1
Query: 136 LSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVIVKSLLYTLRG 288
LSK+LR K+ ++ P+ K D V+++ G KG+ GKV+ V K++ ++ G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEG 59
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 41.1 bits (92), Expect = 0.008
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 130 SPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVIVKSLLYTLRG 288
+PLS EL ++ +K + IRKDD V+V+RG G + GKV QV +S + G
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEG 59
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 41.1 bits (92), Expect = 0.008
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +1
Query: 136 LSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVIVKSLLYTLRG 288
LSK+LR K+ ++S PI K D V+VV G KG+ GKV +V S L + G
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEG 58
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 38.7 bits (86), Expect = 0.040
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSP 135
M FN +T NRKRH +APSH+ R MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 38.3 bits (85), Expect = 0.053
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 73 KNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 252
K RK AP H + + LS +LR ++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 253 V 255
V
Sbjct: 66 V 66
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 37.5 bits (83), Expect = 0.093
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +1
Query: 124 MSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQV 255
+ S LSK+L+ K+ +S+ + + D V ++RG +KG GKV +V
Sbjct: 23 LGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEV 65
>UniRef50_Q337N5 Cluster: Expressed protein; n=4; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 1517
Score = 34.7 bits (76), Expect = 0.66
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 210 TWTLQRPTGWQSDAGYRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAI 389
+W L PT + + RK ++ IE+ R Y GI P + KLKMN D++ +
Sbjct: 970 SWALNFPTSCLTPSHRRKCALIEIEKNMRQAGKSLKEYAGIEPPN--MAKLKMNYDKEKL 1027
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 34.3 bits (75), Expect = 0.87
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 55 VTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGHY 222
V+ K R+ AP H+ R M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 33.9 bits (74), Expect = 1.1
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -1
Query: 255 NLHHFANLLAFVVSTYNLNFIVFANRHGFYIEFXS*FLRQGRGHXHSXYM*RSTEMPLPV 76
+LHH L A V ++L+ +V A+ G + + +G GH + R E+ LP
Sbjct: 125 DLHHLP-LAALVAPPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAADGGRRREVRLPA 183
Query: 75 FPS*GSHLLVELH 37
P H V LH
Sbjct: 184 LPPGARHAWVALH 196
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 33.5 bits (73), Expect = 1.5
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +1
Query: 166 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVIVK 264
+K IRKDD+V V+ G KG ++GKV++V+ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRK 32
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 31.9 bits (69), Expect = 4.6
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +1
Query: 175 MPIRKDDEVQVVRGHYKGQQVGKVMQVIVKS 267
M I++ D+VQV+ G YKG ++ +V++VI KS
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKS 30
>UniRef50_Q9HNN4 Cluster: UPF0447 protein VNG2021C; n=1;
Halobacterium salinarum|Rep: UPF0447 protein VNG2021C -
Halobacterium salinarium (Halobacterium halobium)
Length = 492
Score = 31.5 bits (68), Expect = 6.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 133 PLSKELRXKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVIVKSL 270
P+SK + + N +PI + E+ V G Q GKV QVI S+
Sbjct: 151 PMSKRRQPEQNWYDLPIEERAEMMDVHGDLGKQYAGKVSQVIASSV 196
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 31.1 bits (67), Expect = 8.1
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 175 MPIRKDDEVQVVRGHYKGQQVGKVMQVIVKSLLYTLRG 288
M ++K D V V G YKG +VGKV +V+ K + G
Sbjct: 5 MHVKKGDTVLVASGKYKG-RVGKVKEVLPKKYAVIVEG 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,425,349
Number of Sequences: 1657284
Number of extensions: 6143797
Number of successful extensions: 14109
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 13863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14107
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -