Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30028
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 161 1e-38
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 161 1e-38
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 145 9e-34
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 132 9e-30
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 132 9e-30
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 131 2e-29
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 115 9e-25
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 107 2e-22
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 104 2e-21
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 102 9e-21
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 88 1e-16
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 84 3e-15
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 81 2e-14
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 74 3e-12
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 67 3e-10
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 66 5e-10
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 64 4e-09
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 60 5e-08
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 59 1e-07
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 52 9e-06
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 52 1e-05
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 51 2e-05
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 50 6e-05
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 48 2e-04
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 47 3e-04
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 44 0.002
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 44 0.003
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 42 0.013
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 40 0.052
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.091
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 37 0.48
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 34 3.4
UniRef50_Q82SS9 Cluster: SLT domain; n=2; Nitrosomonas|Rep: SLT ... 33 4.5
UniRef50_Q58P63 Cluster: Cation/H+ exchanger; n=14; Magnoliophyt... 33 4.5
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 6.0
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 6.0
UniRef50_UPI0000DB7720 Cluster: PREDICTED: similar to CG8486-PA,... 33 7.9
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 7.9
UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2; Meth... 33 7.9
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 161 bits (391), Expect = 1e-38
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGS
Sbjct: 10 KRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPL 261
EC TRKTRIIDVVYNASNNELVRTK L
Sbjct: 70 ECCTRKTRIIDVVYNASNNELVRTKTL 96
Score = 97.1 bits (231), Expect = 3e-19
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 419
KTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 161 bits (391), Expect = 1e-38
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGS
Sbjct: 10 KRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPL 261
EC TRKTRIIDVVYNASNNELVRTK L
Sbjct: 70 ECCTRKTRIIDVVYNASNNELVRTKTL 96
Score = 132 bits (318), Expect = 9e-30
Identities = 59/86 (68%), Positives = 71/86 (82%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQ 431
KTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R+
Sbjct: 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 153
Query: 432 RLAKVEGALEEQFHTGRLLACVASRP 509
+ AK+ LEEQF G+LLAC+ASRP
Sbjct: 154 KNAKISSLLEEQFQQGKLLACIASRP 179
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKRAK 595
PGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 179 PGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 145 bits (351), Expect = 9e-34
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W S
Sbjct: 10 KRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWAS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPL 261
E RKTRI DVVYNASNNELVRTK L
Sbjct: 70 EGVARKTRIADVVYNASNNELVRTKTL 96
Score = 122 bits (295), Expect = 6e-27
Identities = 55/88 (62%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLA 425
KTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL
Sbjct: 94 KTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLE 153
Query: 426 RQRLAKVEGALEEQFHTGRLLACVASRP 509
RQ+ KVE ALE+QF +GR+LAC++SRP
Sbjct: 154 RQKYGKVEQALEDQFTSGRILACISSRP 181
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKR 589
PGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 181 PGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 132 bits (318), Expect = 9e-30
Identities = 59/86 (68%), Positives = 71/86 (82%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQ 431
KTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R+
Sbjct: 74 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERK 133
Query: 432 RLAKVEGALEEQFHTGRLLACVASRP 509
+ AK+ LEEQF G+LLAC+ASRP
Sbjct: 134 KNAKISSLLEEQFQQGKLLACIASRP 159
Score = 101 bits (241), Expect = 2e-20
Identities = 57/87 (65%), Positives = 61/87 (70%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 10 KRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG------------------ 51
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPL 261
C TRKTRIIDVVYNASNNELVRTK L
Sbjct: 52 -C-TRKTRIIDVVYNASNNELVRTKTL 76
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKRAK 595
PGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 159 PGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 132 bits (318), Expect = 9e-30
Identities = 64/88 (72%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 177
KRRATGGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWG
Sbjct: 10 KRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWG 69
Query: 178 SECSTRKTRIIDVVYNASNNELVRTKPL 261
SE TRKTRI+DVVYNASNNELVRT+ L
Sbjct: 70 SEAVTRKTRILDVVYNASNNELVRTQTL 97
Score = 79.4 bits (187), Expect = 7e-14
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKT 407
+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E A K+S
Sbjct: 95 QTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHV 154
Query: 408 ARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 509
RK R+ ++ +EEQF +GRLLAC++SRP
Sbjct: 155 TRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRP 188
Score = 58.4 bits (135), Expect = 1e-07
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKRAK 595
PGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 188 PGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 131 bits (316), Expect = 2e-29
Identities = 60/87 (68%), Positives = 73/87 (83%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KRR TGG+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS
Sbjct: 10 KRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPL 261
+ TRKTR++DVVYNAS+NELVRTK L
Sbjct: 70 QNVTRKTRVMDVVYNASSNELVRTKTL 96
Score = 60.1 bits (139), Expect = 5e-08
Identities = 40/86 (46%), Positives = 51/86 (59%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQ 431
KTLVKNAIV VD TPF+ W+++HY L LG K +E +A S+K A
Sbjct: 94 KTLVKNAIVTVDPTPFKLWFKTHYGLELG-----KSSEDPQA------SEKVA------- 135
Query: 432 RLAKVEGALEEQFHTGRLLACVASRP 509
A V L +QF +GRLLAC++SRP
Sbjct: 136 --ALVPRTLLDQFSSGRLLACISSRP 159
Score = 48.4 bits (110), Expect = 1e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKR 589
PGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 159 PGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 115 bits (277), Expect = 9e-25
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KR+ TGGK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W S
Sbjct: 10 KRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWAS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPL 261
E + R++DVVYNA++NELVRTK L
Sbjct: 70 EAIAHRVRLLDVVYNATSNELVRTKTL 96
Score = 65.7 bits (153), Expect = 9e-10
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK----K 392
KTLVKN IV VDA PF++WY HY + L KK K A E A +K K
Sbjct: 94 KTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNK 153
Query: 393 RSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 509
S K R++ R+R +VE A+ +Q GR+LA + SRP
Sbjct: 154 ASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRP 192
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKR 589
PGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 192 PGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 107 bits (258), Expect = 2e-22
Identities = 51/87 (58%), Positives = 65/87 (74%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KRRATGGK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S
Sbjct: 10 KRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWAS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPL 261
+ T+ T+I++VVYNAS+N+ VRT L
Sbjct: 70 QSITKGTKILNVVYNASDNDFVRTNTL 96
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKR 589
PGQ G +GYILEGKEL+FY +KI K+
Sbjct: 209 PGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 354 KLTEAEEAIIN-KKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 509
++ E + A++N K QK K L + K + AL E F +GR+LAC++SRP
Sbjct: 157 QIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRP 209
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 104 bits (249), Expect = 2e-21
Identities = 50/82 (60%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +1
Query: 19 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 195
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 196 KTRIIDVVYNASNNELVRTKPL 261
KTRI+DVVY A+NNELVRT+ L
Sbjct: 173 KTRILDVVYIATNNELVRTQTL 194
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 374
+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 192 QTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 102 bits (244), Expect = 9e-21
Identities = 47/72 (65%), Positives = 56/72 (77%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KR ATG KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGS
Sbjct: 10 KRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGS 69
Query: 181 ECSTRKTRIIDV 216
E RK R+I V
Sbjct: 70 EGIARKVRVIVV 81
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIK 580
PGQ GR DGYILEG+EL FY R I+
Sbjct: 116 PGQSGRVDGYILEGEELAFYQRAIR 140
Score = 37.9 bits (84), Expect = 0.21
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 339 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRP 509
R + + E I K R +K AR KVE ALE+QF GRL A V+SRP
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRP 116
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 88.2 bits (209), Expect = 1e-16
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRL 153
KR TG + KKRKY LGR ANT+L Q+I ++R RGGN K RALRL
Sbjct: 10 KRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRL 69
Query: 154 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKPL 261
G+F+WGS + K RI+ VVYN+++NELVRT L
Sbjct: 70 SHGSFAWGSADISHKARILQVVYNSTSNELVRTNTL 105
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSK 586
PGQ G ADGYILEG EL FY +K+ K
Sbjct: 148 PGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 83.8 bits (198), Expect = 3e-15
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KRR TG K RKKR G ++T++G +++ VR RGGN KY+ALRLD G+F + +
Sbjct: 10 KRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFIT 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPLSR 267
R +++ VVY+ S+NELVRT L++
Sbjct: 70 TGKFRMAKLLQVVYHPSSNELVRTNTLTK 98
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSK 586
PGQ G A G++L+G EL+FY K K
Sbjct: 141 PGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/89 (46%), Positives = 59/89 (66%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGS 180
KR++TGG ++ RKKR + GR +NT++G + + +R RGG K RAL L GNFS+ S
Sbjct: 10 KRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPLSR 267
T K +I+ V +N S+NELVRT L++
Sbjct: 70 IQRTFKAKILSVAFNESSNELVRTNTLTK 98
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSK 586
PGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 152 PGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 73.7 bits (173), Expect = 3e-12
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Frame = +3
Query: 264 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 422
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 423 ARQRL--AKVEGALEEQFHTGRLLACVASRPVSV 518
RQ L A VE +L+E+F TGRLLAC++S+P V
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQV 94
Score = 52.8 bits (121), Expect = 7e-06
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKRAK 595
PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 91 PGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 183
R+ +GGK P KR+YELGR TRLG + + +RS GGN+K+ LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 184 CSTRKTRIIDVVYNASNNELVRTKPLSR 267
+TRK +I V N+++ V+ ++R
Sbjct: 70 KTTRKVKINTVKENSADPHYVQRNIMNR 97
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 66.5 bits (155), Expect = 5e-10
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 177
K++ TGGK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62
Query: 178 SECSTRKTRIIDVVYNASNNELVRTKPLSR 267
+ ++ ++I+ V+YN +N +LV+ + LS+
Sbjct: 63 TMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 506 PGQCGRADGYILEGKELEFYLRKIKSKRAK 595
PGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 120 PGQCGRADGYILEGKELEFYLRKIKAKKGK 149
Score = 37.5 bits (83), Expect = 0.28
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 339 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 509
R+ + T EE ++NKKRS+KT +KY R AC+ASRP
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRP 120
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 60.1 bits (139), Expect = 5e-08
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 183
R+ +GG+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 184 CSTRKTRIIDVVYNASNNELVRTKPLSR 267
T+KT+I V N+++ VR K L++
Sbjct: 69 GETKKTKIEAVEANSADPNYVRRKLLTK 96
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 180
++ATGG RKKR++ELGR T+LG + V R+ GGNTK +T N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPLSR 267
E +K +II V N +N+ V+ +++
Sbjct: 70 EKKIKKAKIITVKANPANSHYVQRNIINK 98
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/88 (32%), Positives = 45/88 (51%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 183
R+ATGG+ R KRK+ELGR +G Q++ + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 184 CSTRKTRIIDVVYNASNNELVRTKPLSR 267
T+K ++ V N +N VR L++
Sbjct: 69 GKTQKVKMTTVTENPANKNYVRRNFLTK 96
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGS 180
R+ TGG + R KRKYE+G P T L + I R+ GGN K R T N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 181 ECSTRKTRIIDVVYNASNNELVR 249
+ +K +I++++ +N EL R
Sbjct: 70 TNTAKKVKILEILETPANKELAR 92
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGS 180
++ +GG+ RKKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68
Query: 181 ECSTRKTRIIDVVYNASNNELVRTKPLSR 267
RK RII V+ N +N + R +++
Sbjct: 69 SGKGRKVRIIRVLENPANRQFARRNIITK 97
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 49.6 bits (113), Expect = 6e-05
Identities = 33/86 (38%), Positives = 48/86 (55%)
Frame = +3
Query: 252 KTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQ 431
+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK RQ
Sbjct: 36 QTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRKLEKRQ 83
Query: 432 RLAKVEGALEEQFHTGRLLACVASRP 509
+ K++ +EEQF +GRLLA ++S P
Sbjct: 84 QDHKLDPHIEEQFGSGRLLAAISSYP 109
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +1
Query: 7 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSEC 186
+ TGG+R P+R +RKYE+ R G Q + + RG TK +D N +
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGA 70
Query: 187 STRKTRIIDVVYNASNNELVRTKPLSR 267
+K++I+ V+ N +NN+ R ++R
Sbjct: 71 KVKKSKIVKVLENPTNNDYRRRGVITR 97
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT-GNFSWG 177
R+ TGG+ P RKKRK+E+G P T +G +R + R GGN K + L+ T N +
Sbjct: 10 RKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADP 68
Query: 178 SECSTRKTRIIDVVYNASN 234
+ RI +VV N ++
Sbjct: 69 ETGEVKCVRIEEVVKNPAS 87
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWG 177
+R +TG K KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQ 68
Query: 178 SECSTRKTRIIDVVYNASNNELVRTKPLSR 267
+ +K + +V+ N +N +R +++
Sbjct: 69 ANKVCKKVVVTNVIDNKANKHYIRRNVMTK 98
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 1 KRRATGGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKYRALRLDTGNF 168
K++ +GGKR K KRKY GRP T L + VR+RGG+ K +A ++
Sbjct: 9 KKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVV 68
Query: 169 SWGSECSTRKTRIIDVVYNASNNELVR 249
S RK RI+ +V ++ E R
Sbjct: 69 SNPKTGEARKARILRIVETPAHREYAR 95
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 183
R+ +G + + KR E GR A TR+G + + +RG TK RA N +
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKD 69
Query: 184 CSTRKTRIIDVVYNASNNELVRTKPLSR 267
S++ ++ V+ N +N+ VR +++
Sbjct: 70 NSSKNVEMLTVLENGANSHFVRRNIITK 97
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 39.9 bits (89), Expect = 0.052
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 RRATGGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWG 177
++ +GGK+ +RK +K L G P +LG V R RGGN K R N
Sbjct: 13 KKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIP 72
Query: 178 SECSTRKTRIIDVVYNASNNELVR 249
E + K +II ++ +N + R
Sbjct: 73 KERKSVKAKIISIISTPANPDFAR 96
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 39.1 bits (87), Expect = 0.091
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 339 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPVSV 518
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S PV+V
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYPVNV 329
Query: 519 V 521
V
Sbjct: 330 V 330
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 36.7 bits (81), Expect = 0.48
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 10 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 120
A G +RAP K YE R AA TRL P + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 263 DKGFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVS 153
D G N L D +Y T I +R EH DP++ LP S
Sbjct: 302 DLGLADYNLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +2
Query: 2 SEGPPVGNVRPYARRGSMS*GVPLQTPGSVLS 97
S GP G + PYA + S S G+PL TPGSVLS
Sbjct: 600 SSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_Q82SS9 Cluster: SLT domain; n=2; Nitrosomonas|Rep: SLT
domain - Nitrosomonas europaea
Length = 301
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -3
Query: 329 QRIMRLIPLPEWSCIYYNNCILDKGFVRTNSLLDALYTTSMIRVLRVEHSDPQEKL 162
Q+++R +PLP+ + NC+ +VRTN + Y I L VE PQ ++
Sbjct: 115 QKLLRFMPLPDKRKVQLPNCLSRNVYVRTNITPNKYYVDQSISAL-VEKLAPQYEI 169
>UniRef50_Q58P63 Cluster: Cation/H+ exchanger; n=14;
Magnoliophyta|Rep: Cation/H+ exchanger - Arabidopsis
thaliana (Mouse-ear cress)
Length = 838
Score = 33.5 bits (73), Expect = 4.5
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +3
Query: 354 KLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPVSVVAPMV 533
+LTE +II +R++K ++ R R + + F R L VA RP++ V+P+
Sbjct: 497 ELTERSSSIIMVQRARKNGLPFVHRYRHGERHSNVIGGFEAYRQLGRVAVRPITAVSPLP 556
Query: 534 T 536
T
Sbjct: 557 T 557
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 360 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 470
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 309 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 464
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_UPI0000DB7720 Cluster: PREDICTED: similar to CG8486-PA,
isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG8486-PA, isoform A - Apis mellifera
Length = 321
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -3
Query: 296 WSCIYYNNCILDKGFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPP 120
W+C N L KGF + +L A+ ++ +L ++ PQE +PV+ RYL P
Sbjct: 213 WAC----NKELRKGFAKLCRILMAVVVLHILVLLSYQNQIPQELIPVNSTWQRYLALIP 267
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 273 IVVVDATPFRQWYESHYTLPLGRKK 347
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2;
Methylobacterium extorquens PA1|Rep:
Exodeoxyribonuclease III Xth - Methylobacterium
extorquens PA1
Length = 344
Score = 32.7 bits (71), Expect = 7.9
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 7 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL-DTGNFSWGSE 183
R G+R P+R++ + E RP A+ R P H+ R+R G R L + + F + S
Sbjct: 7 RGLAGRRGPLRRRGRRERLRPLADDR-RPALRHAARARPGGGGGRGLTVCEARRFRYRSG 65
Query: 184 CSTRKTRIIDV 216
S ++ I V
Sbjct: 66 SSRHASQAIPV 76
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 288 ATPFRQWYESHYTLPLGRKKGAKLTEAE 371
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,000,036
Number of Sequences: 1657284
Number of extensions: 11183506
Number of successful extensions: 32831
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 31512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32802
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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