Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a08r
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000049A104 Cluster: protein kinase; n=1; Entamoeba h...    38   0.33 
UniRef50_Q4XM37 Cluster: Putative uncharacterized protein; n=2; ...    35   2.3  
UniRef50_Q232Q7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_UPI000049A104 Cluster: protein kinase; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
           histolytica HM-1:IMSS
          Length = 411

 Score = 37.5 bits (83), Expect = 0.33
 Identities = 22/69 (31%), Positives = 36/69 (52%)
 Frame = -1

Query: 404 HYSSINVKKQSSNFGSVECSLSLRTPGLIKFYENLCQFLFNIYC**KTQIKILSKYNLHH 225
           HYS +  KK+S      E    L  P ++K+Y++    +FN Y      ++ +  Y+L H
Sbjct: 164 HYSDLTDKKKSQIERECEVMSKLNHPNIVKYYQSF-SGIFNKY----IVMEFIDGYDLFH 218

Query: 224 *KFTNSLLE 198
             FTN+LL+
Sbjct: 219 IVFTNNLLK 227


>UniRef50_Q4XM37 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 315

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 7   YSGHLAR*CQSHMVQVELDYLNLFTKNVKKINNL 108
           +  +L R CQ+H+ Q   DYLN    N K++ NL
Sbjct: 121 FLSYLFRICQNHLTQNNFDYLNQLLNNFKELKNL 154


>UniRef50_Q232Q7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 458

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 15/58 (25%), Positives = 34/58 (58%)
 Frame = -3

Query: 222 EIH*LVIGVLCPRRICFYTYMHTKCNLKYNTLFLKYFIKIVYFFNVFCEEIQIIKFYL 49
           +I+  V  VL      +Y+Y+    N++YN    +Y+I+++  FN +C++++++   L
Sbjct: 377 QINKTVTFVLSQNYTNYYSYL---ANIQYNQSSSEYYIQMLDSFNCYCKQVRMLNLQL 431


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,632,251
Number of Sequences: 1657284
Number of extensions: 12084039
Number of successful extensions: 25584
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25578
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)