SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0007
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    78   2e-13
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve...    69   6e-11
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo...    62   1e-08
UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n...    53   6e-06
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep...    50   3e-05
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu...    47   4e-04
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa...    46   5e-04
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0...    46   5e-04
UniRef50_Q7YT64 Cluster: Tyrosine-protein kinase receptor; n=1; ...    43   0.005
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;...    40   0.044
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN...    39   0.078
UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia ...    35   1.7  
UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8; ...    33   3.9  
UniRef50_A6BKX8 Cluster: Putative uncharacterized protein; n=8; ...    33   5.1  
UniRef50_Q2G7J6 Cluster: GCN5-related N-acetyltransferase; n=1; ...    33   6.7  
UniRef50_UPI00015B4BE5 Cluster: PREDICTED: similar to euchromati...    32   8.9  
UniRef50_A0LH83 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 144

 Score = 77.8 bits (183), Expect = 2e-13
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = -2

Query: 195 QTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTG 52
           Q  H P+LRANPY EVTD  CRLPL TLFY+LEA+HLGDLLR+ VR G
Sbjct: 58  QGPHCPILRANPYPEVTDLFCRLPLSTLFYQLEAVHLGDLLRLSVRPG 105



 Score = 32.7 bits (71), Expect = 6.7
 Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
 Frame = -3

Query: 494 LDSRIPLVRASSELTV---ERRSYRIVPIAHETKP 399
           LDS+IPLVR SS+L V   +RRS R +P    T+P
Sbjct: 1   LDSQIPLVRTSSKLIVNCSKRRSTRDLPRPSTTRP 35


>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 123

 Score = 69.3 bits (162), Expect = 6e-11
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -2

Query: 180 PVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVR 58
           P LRANP+ EVTD  CRLPLPTLFY+ EA HLGDLLR+ VR
Sbjct: 63  PTLRANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLVR 103


>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
           Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
           tabacum (Common tobacco)
          Length = 530

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 29/40 (72%), Positives = 31/40 (77%)
 Frame = -1

Query: 175 PQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTN 56
           PQSQS  RSYGS LPTSL YI+ STRG SPWRP A +G N
Sbjct: 224 PQSQSFSRSYGSILPTSLAYIVPSTRGCSPWRPDAFVGGN 263



 Score = 41.1 bits (92), Expect = 0.019
 Identities = 27/65 (41%), Positives = 32/65 (49%)
 Frame = -3

Query: 542 ITLRQHPRGPSHALF*LDSRIPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRP 363
           ITLR   R   +ALF L+SRIPLVR SSEL V R             P R  A + R   
Sbjct: 145 ITLRNIRRDHRNALFKLNSRIPLVRTSSELAVRRPGKAPEGTVPSPSPGRHAATRSRRGS 204

Query: 362 ENAGP 348
            ++ P
Sbjct: 205 SSSSP 209



 Score = 40.7 bits (91), Expect = 0.025
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = -1

Query: 598 VYPRLLEFLHVDIQSTGQKSHCVNTREGHRMLCFN*TVGFPL 473
           VYPRL+EFLH DIQSTG+ +   N R  HR   F      PL
Sbjct: 127 VYPRLVEFLHFDIQSTGRIT-LRNIRRDHRNALFKLNSRIPL 167


>UniRef50_UPI00006A2901 Cluster: UPI00006A2901 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A2901 UniRef100 entry -
           Xenopus tropicalis
          Length = 154

 Score = 52.8 bits (121), Expect = 6e-06
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -1

Query: 598 VYPRLLEFLHVDIQSTGQKSHCVN 527
           VYPRL+EFLH DIQSTGQKSHCVN
Sbjct: 129 VYPRLVEFLHFDIQSTGQKSHCVN 152


>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
           receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
           acetyl choline receptor - Acheta domesticus (House
           cricket)
          Length = 39

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -2

Query: 153 EVTDPICRLPLPTLFYRLEALHLG 82
           EVTDPICRLPLPT  YRL+ALHLG
Sbjct: 16  EVTDPICRLPLPTFVYRLDALHLG 39


>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
           Euteleostomi|Rep: RRNA promoter binding protein - Rattus
           norvegicus (Rat)
          Length = 295

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = -3

Query: 209 IRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYS 108
           +R P++P  P   EPILIPKLRI+ ADFPYLH S
Sbjct: 146 LRAPARPTQPL--EPILIPKLRIRLADFPYLHCS 177



 Score = 37.5 bits (83), Expect = 0.24
 Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = -2

Query: 216 RPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFY-----RLEALHLGDLLRIWVRTG 52
           RP PL      AP     P   +  P  R+ L    Y       EA+HLGDLLRIWVR G
Sbjct: 142 RPAPL-----RAPARPTQPLEPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPG 196

Query: 51  A 49
           A
Sbjct: 197 A 197


>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
          Aa1-330 - Rattus norvegicus (Rat)
          Length = 151

 Score = 46.4 bits (105), Expect = 5e-04
 Identities = 19/23 (82%), Positives = 19/23 (82%)
 Frame = -3

Query: 98 RLFTLETCCGYGYEPARHLHVHP 30
          RLFTLETCCGYGY PAR LH  P
Sbjct: 25 RLFTLETCCGYGYGPARDLHPLP 47


>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
           LRRG00134 - Rattus norvegicus (Rat)
          Length = 221

 Score = 46.4 bits (105), Expect = 5e-04
 Identities = 19/23 (82%), Positives = 19/23 (82%)
 Frame = -3

Query: 98  RLFTLETCCGYGYEPARHLHVHP 30
           RLFTLETCCGYGY PAR LH  P
Sbjct: 95  RLFTLETCCGYGYGPARDLHPLP 117


>UniRef50_Q7YT64 Cluster: Tyrosine-protein kinase receptor; n=1;
           Crassostrea gigas|Rep: Tyrosine-protein kinase receptor
           - Crassostrea gigas (Pacific oyster) (Crassostrea
           angulata)
          Length = 804

 Score = 43.2 bits (97), Expect = 0.005
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +1

Query: 532 RNVISAQCSECQREEIQASAGK 597
           RNVISAQCSECQ EEIQ+S GK
Sbjct: 1   RNVISAQCSECQSEEIQSSEGK 22


>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
           n=3; Eukaryota|Rep: Putative senescence-associated
           protein - Plasmodium yoelii yoelii
          Length = 205

 Score = 39.9 bits (89), Expect = 0.044
 Identities = 18/28 (64%), Positives = 19/28 (67%)
 Frame = -1

Query: 598 VYPRLLEFLHVDIQSTGQKSHCVNTREG 515
           VY   +EF  VDI  TGQKSHCVNT  G
Sbjct: 159 VYLCFIEFHQVDIHGTGQKSHCVNTISG 186



 Score = 37.9 bits (84), Expect = 0.18
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -2

Query: 546 RNHIASTPARAIACFVLIRQSDSPCPCQF 460
           ++H  +T +    C+VLI+QSDSPCP QF
Sbjct: 177 KSHCVNTISGFSQCYVLIKQSDSPCPFQF 205


>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
           RIKEN full-length enriched library, clone:F730204M12
           product:hypothetical protein, full insert sequence; n=3;
           Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
           RIKEN full-length enriched library, clone:F730204M12
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 136

 Score = 39.1 bits (87), Expect = 0.078
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +1

Query: 13  LENSGEGCTWRCRAGSYPYPQQVSKVKSL 99
           L+  G GC  + RAG YPYPQQVSKV SL
Sbjct: 104 LKIRGRGC--KSRAGPYPYPQQVSKVNSL 130


>UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 39

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +1

Query: 106 IE*CR*GKSANWIRNFGIRIGSE 174
           +E CR GKSA  IRNFG RIGSE
Sbjct: 1   MEQCRQGKSAKRIRNFGKRIGSE 23


>UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_748_1200_211 - Giardia lamblia ATCC
           50803
          Length = 329

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 18/37 (48%), Positives = 21/37 (56%)
 Frame = -1

Query: 172 QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMG 62
           QS S  R YG+ LPTSL+ +    RG  P  PAA  G
Sbjct: 290 QSHSFSRGYGAGLPTSLSRVRSRARGCWPRSPAAWWG 326


>UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8;
           Bacteria|Rep: Putative uncharacterized protein -
           Corynebacterium efficiens
          Length = 261

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 182 PRSSEPILIPKLRIQFADFPYLHYSID*RL--FTLETCCGYGYEPARHL 42
           P   +  L+PKLR  FA+F  L++S   RL    L TC G GY P  H+
Sbjct: 95  PSPVQAPLLPKLRGHFAEF--LNHSSPERLSILYLTTCVGLGYGPNMHI 141


>UniRef50_A6BKX8 Cluster: Putative uncharacterized protein; n=8;
           Clostridiales|Rep: Putative uncharacterized protein -
           Dorea longicatena DSM 13814
          Length = 109

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -1

Query: 163 SLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGT 59
           S  RSYG  LP+SLT ++ S  G SP  P +  GT
Sbjct: 13  SFSRSYGVILPSSLTMLLPSALGFSPHPPVSVYGT 47


>UniRef50_Q2G7J6 Cluster: GCN5-related N-acetyltransferase; n=1;
           Novosphingobium aromaticivorans DSM 12444|Rep:
           GCN5-related N-acetyltransferase - Novosphingobium
           aromaticivorans (strain DSM 12444)
          Length = 227

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 151 FGIRIGSEDRGVSGLDGKRMRPVPGLVDVRALCSFSE 261
           +G+RI   D  ++ + G+RMRP P L +V  +C++ E
Sbjct: 134 YGVRI---DGRLAAMAGERMRPAPNLAEVSGVCTWPE 167


>UniRef50_UPI00015B4BE5 Cluster: PREDICTED: similar to euchromatic
           histone methyltransferase 1; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to euchromatic
           histone methyltransferase 1 - Nasonia vitripennis
          Length = 1392

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = -3

Query: 422 PIAHET-KPTRLTARKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NT--NSLN 252
           P+  ET  P    AR+ R R  +  P+  R+ RR S+ S    TV E+A+      N   
Sbjct: 249 PMESETITPVTRKARQKRLRELSVEPELKRSARRLSKESSKT-TVLESAMARKEKFNYTE 307

Query: 251 EHNARTSTRPGTGRIRFPSKPDTPRSSEPI 162
           E   R  ++PG  R   P K DT     PI
Sbjct: 308 ESTKRKYSKPGRPRKVLPEKKDTIPLLNPI 337


>UniRef50_A0LH83 Cluster: Putative uncharacterized protein; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Putative
           uncharacterized protein - Syntrophobacter fumaroxidans
           (strain DSM 10017 / MPOB)
          Length = 372

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -3

Query: 470 RASSELTVERRSYRIVPIAHETKPTRLTARKIRGRPENAGPDPVRNVR 327
           RA   L +  RS+R+  + H   P R  AR +  RPE  GP P R VR
Sbjct: 292 RAPGGLPLRSRSHRL--LRHGRPPDR-PARPVGERPEPVGPGPHRQVR 336


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,089,466
Number of Sequences: 1657284
Number of extensions: 13004258
Number of successful extensions: 37737
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 36194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37724
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -