Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0013
         (616 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   5e-04
UniRef50_Q8IBB2 Cluster: Putative uncharacterized protein MAL8P1...    33   7.1  
UniRef50_Q9NA99 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.4 bits (105), Expect = 5e-04
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +3

Query: 63  RWMDELTAHLFVKWLLEPKDIHNVNTPPILRYKF 164
           RW+DELTAHL +     P+ +++VN PP  RYKF
Sbjct: 158 RWVDELTAHLVLSGYWSPRHLYDVNAPPTSRYKF 191


>UniRef50_Q8IBB2 Cluster: Putative uncharacterized protein
           MAL8P1.15; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.15 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1080

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
 Frame = +1

Query: 181 LQRLYYLLYSDSVSNRP*NDILSKISKLFRPGLNVSQLFLKCIKLY----KTCKIFYY-- 342
           + +LYY+L      +   N ++ K  + + P LN+ ++ L C  L     K  KI  Y  
Sbjct: 336 INQLYYILLISQYYDLDLNMLIKKNIQTYLPFLNIYEIILACTNLLLNFTKNDKILLYMI 395

Query: 343 -HQ*LHXSQNYLCHVRKNSNI 402
            +     S+N L   +KN+NI
Sbjct: 396 PYDESRKSKNQLMESKKNNNI 416


>UniRef50_Q9NA99 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 1099

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = +1

Query: 238 DILSKISKLFRPGLNVSQLFLKCIKLYKT 324
           D    I+KL + GL+VS+LFLKCI++ +T
Sbjct: 388 DQTEAITKLPQWGLDVSELFLKCIRILET 416


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,001,802
Number of Sequences: 1657284
Number of extensions: 8132428
Number of successful extensions: 17207
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17192
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)