Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0007
         (827 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q538A5 Cluster: Chorion b-ZIP transcription factor; n=1...   188   2e-46
UniRef50_Q2ULG4 Cluster: Microtubule-associated protein; n=4; Pe...    35   2.2  
UniRef50_Q2H4B1 Cluster: Putative uncharacterized protein; n=1; ...    35   2.9  
UniRef50_Q9Z6Z6 Cluster: tRNA delta(2)-isopentenylpyrophosphate ...    35   2.9  
UniRef50_Q5F342 Cluster: Putative uncharacterized protein; n=11;...    34   5.0  
UniRef50_A7QMI7 Cluster: Chromosome chr19 scaffold_126, whole ge...    34   5.0  
UniRef50_A5BW09 Cluster: Putative uncharacterized protein; n=2; ...    34   5.0  
UniRef50_A7PT04 Cluster: Chromosome chr8 scaffold_29, whole geno...    33   8.7  
UniRef50_A7RUX9 Cluster: Predicted protein; n=1; Nematostella ve...    33   8.7  
UniRef50_A0E2V8 Cluster: Chromosome undetermined scaffold_75, wh...    33   8.7  
UniRef50_Q18IA1 Cluster: Putative uncharacterized protein; n=2; ...    33   8.7  

>UniRef50_Q538A5 Cluster: Chorion b-ZIP transcription factor; n=1;
           Bombyx mori|Rep: Chorion b-ZIP transcription factor -
           Bombyx mori (Silk moth)
          Length = 512

 Score =  188 bits (457), Expect = 2e-46
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = +3

Query: 510 YLKPEQLYASTMLHGSNSEFFQELDQLCSDPEREEQTRTIDSHKETEKRACSFDTPHTSF 689
           YLKPEQLYASTMLHGSNSEFFQELDQLCSDPEREEQTRTIDSHKETEKRACSFDTPHTSF
Sbjct: 59  YLKPEQLYASTMLHGSNSEFFQELDQLCSDPEREEQTRTIDSHKETEKRACSFDTPHTSF 118

Query: 690 CLQGWDVQDDNSPYGQAGFYSNT 758
           CLQGWDVQDDNSPYGQAGFYSNT
Sbjct: 119 CLQGWDVQDDNSPYGQAGFYSNT 141



 Score =  121 bits (291), Expect = 3e-26
 Identities = 57/58 (98%), Positives = 58/58 (100%)
 Frame = +1

Query: 337 MVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPTASFSED 510
           MVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPTASFSE+
Sbjct: 1   MVFSQTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTVPTASFSEE 58



 Score = 49.6 bits (113), Expect = 9e-05
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +2

Query: 764 DTISPAFDGFALNNDLGPIPE 826
           DTISPAFDGFALNNDLGPIPE
Sbjct: 144 DTISPAFDGFALNNDLGPIPE 164


>UniRef50_Q2ULG4 Cluster: Microtubule-associated protein; n=4;
           Pezizomycotina|Rep: Microtubule-associated protein -
           Aspergillus oryzae
          Length = 903

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 297 DIGTQYTNPNTKRHGFFANESQDSKHFESSRPRSFKARKEPTGERSNRS-DSP 452
           D G+ Y +  +  HG  A        FESSRPRS+ A   P+ E+ N   +SP
Sbjct: 767 DAGSVYQDTASNGHGPLARGYHSGSRFESSRPRSY-ASASPSEEKENSGLESP 818


>UniRef50_Q2H4B1 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 592

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
 Frame = +1

Query: 445 IHQGNNGVM-PQGTVPTASFSEDI*NRNSYTRAQCFTVRTQSSSKNWISCAPIQKGKNKH 621
           I  GN GV+  Q      S+++D    +++   +C    +    K           + K+
Sbjct: 69  ISPGNRGVIWDQEIYENWSYNQDRVFFHTFELEECLAGLSFVDEKEAKQFLKKMNDREKN 128

Query: 622 GPLILIKKPKNGHVPSTHRTHHSAYKG--GMYRTITLPTARQAFIVTPPGHD 771
                +K P  G  PS H  HH  + G  G +R  + PT  ++  V+ P  D
Sbjct: 129 ASKATLKTPFGGAAPSNHHKHHGLFGGLFGGHRHSSAPTPPESPRVSAPVRD 180


>UniRef50_Q9Z6Z6 Cluster: tRNA delta(2)-isopentenylpyrophosphate
           transferase; n=8; Chlamydiaceae|Rep: tRNA
           delta(2)-isopentenylpyrophosphate transferase -
           Chlamydia pneumoniae (Chlamydophila pneumoniae)
          Length = 342

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 236 EFNQFYKNGCSKDHLPESERRY-RNSIHQSKHQKTWFFRKRVSR 364
           E+ +F  NG   +   E++R++  NS H +K QKTWF R  + R
Sbjct: 275 EWIEFLDNGEKLEEYEETKRKFVSNSWHYTKKQKTWFKRYSIFR 318


>UniRef50_Q5F342 Cluster: Putative uncharacterized protein; n=11;
           Tetrapoda|Rep: Putative uncharacterized protein - Gallus
           gallus (Chicken)
          Length = 855

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 282 PSRSDDIGTQYTNPNTKRHGFFANESQDSKHFESSRPRSFKARKEPTGERSNR 440
           PS  DD       P  K+ G F++E      F SS+  + KA   PT + + +
Sbjct: 58  PSSGDDFKPSSETPQRKQRGLFSDEEDSEDLFSSSKTVTSKATSLPTSKSTTK 110


>UniRef50_A7QMI7 Cluster: Chromosome chr19 scaffold_126, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_126, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 626

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
 Frame = +1

Query: 319 IQTPKDMVFSQTSLKTRNI----LKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQGTV 486
           +QT + +   +TS+  ++I    +   + ++L P    ++ G  G        + P G  
Sbjct: 262 VQTQRTLKSKRTSVLDKSISGAAISSKNKEKLVPSSLPESIGFVGPYQPAQGELPPDGNA 321

Query: 487 PTASFSEDI*NRNSYTRAQCFTVRTQSSSK 576
            T++ + DI NR    R + FT+   + SK
Sbjct: 322 STSTNTSDINNRRKSDRRRSFTLSLMTRSK 351


>UniRef50_A5BW09 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 550

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
 Frame = +1

Query: 349 QTSLKTRNILKVVDLDRLKPEKNQQANGLTGVIHQGNNGVMPQ--GTVPTASFSEDI*NR 522
           +TS +    L++VD D  +P+K     G  G++HQ      PQ  G   TAS +  + NR
Sbjct: 311 KTSWRATQKLQLVDTDVGRPQKTSSLKGNAGIVHQLTAPYNPQQNGVAKTASTAVYLLNR 370

Query: 523 NSYTRAQCFTVRTQSSSKNWISCAPIQKGKNKHGPLILIKKPK 651
              T+A    ++ Q+  + W    P      + G L     PK
Sbjct: 371 LP-TKA----LKKQTPFEAWFDYQPKVMNLKRFGYLCFSFVPK 408


>UniRef50_A7PT04 Cluster: Chromosome chr8 scaffold_29, whole genome
           shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
           chr8 scaffold_29, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 320

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +3

Query: 282 PSRSDDIGTQYTNPNTKRHGFFANESQDSKHFESSRPRSFKARKEPTGERS 434
           PS  D      T+P T R   + N+S+DS    S++P   +A K  TGE +
Sbjct: 226 PSSRDSAAESRTDPETDRDSEYLNQSEDSTSERSTKPTKTEAFK--TGEEA 274


>UniRef50_A7RUX9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 464

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 555 SNSEFFQELDQLCSDPEREEQTRTIDSHKETEKR 656
           S+++ F E ++L SD E+E+  R ++S +ET+ R
Sbjct: 100 SHADLFGEDEELSSDEEKEDNAREVESKEETQAR 133


>UniRef50_A0E2V8 Cluster: Chromosome undetermined scaffold_75, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_75,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 157

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +1

Query: 232 RRVQSIL*KWLLKRSPARVGATISELNTPIQTPKDMVFSQTSLKTRNI-LKVVDLDRLKP 408
           RR++ I+ ++ L   P   GA++S++   ++  K   +    L+ R+I L+ V  DR++ 
Sbjct: 32  RRIEMIVKQFSLPYQPK--GASLSKIKKKVEIQK---YCNNDLRKRSITLEAVQSDRVQR 86

Query: 409 EKNQQANGLTGVIHQGNNGVMPQ 477
           ++ Q +N  +    +G   +MPQ
Sbjct: 87  QEEQSSNNESACHDKGTYMLMPQ 109


>UniRef50_Q18IA1 Cluster: Putative uncharacterized protein; n=2;
           Halobacteriaceae|Rep: Putative uncharacterized protein -
           Haloquadratum walsbyi (strain DSM 16790)
          Length = 862

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +1

Query: 154 IHCTQAYSRDS*LFGSLKS*HFFRSSRRVQSIL*KWLLKRSPARVGA-TISELNTPIQTP 330
           ++  + + +D   F  L S    RS R  QS   K  L  SP  V A + S LNT + +P
Sbjct: 434 LYFEELFDKDFDKFSDLDSLQHSRSFRETQSGFEKEPLDVSPEEVSALSQSSLNTYVNSP 493

Query: 331 KDMVFSQ 351
           +D  FS+
Sbjct: 494 RDYFFSR 500


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,348,489
Number of Sequences: 1657284
Number of extensions: 16551073
Number of successful extensions: 50090
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 47420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50070
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)