Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0070
         (454 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IHU4 Cluster: Putative uncharacterized protein; n=2; ...    32   5.0  
UniRef50_Q97A20 Cluster: TVG1011675 protein; n=2; Thermoplasma v...    32   5.0  
UniRef50_Q4XNP2 Cluster: Putative uncharacterized protein; n=5; ...    31   8.7  
UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  
UniRef50_A2EDL1 Cluster: Surface antigen BspA-like; n=3; Trichom...    31   8.7  
UniRef50_Q9G2W8 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    31   8.7  

>UniRef50_Q8IHU4 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 2738

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +1

Query: 214  RN*LTHLRNKNIFFVTILL*KALKLINYTFTRSKINVKMYLLFIQYSKDNNKM 372
            +N   +  N NIF+       +   +NY FT +KI   + +  + YS DN K+
Sbjct: 2382 KNNFNNNNNNNIFYRDTNNNSSSNHLNYNFTETKIKNNLNISNVMYSNDNQKV 2434


>UniRef50_Q97A20 Cluster: TVG1011675 protein; n=2; Thermoplasma
           volcanium|Rep: TVG1011675 protein - Thermoplasma
           volcanium
          Length = 312

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 210 YPIIIKTIK*DRRLDFKFFSEDILNSNYVFFNCFTNASEL 91
           YP+ I TI+ DR+  F  F EDI +S+ +  N      E+
Sbjct: 13  YPVRIDTIRYDRKFSFVVFVEDIQSSHQIIDNIMDIGDEI 52


>UniRef50_Q4XNP2 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 511

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -2

Query: 156 FSEDILNSNYVFFNCFTNASELFDIRNVSINIFQYFIRYSYFRHSSNL 13
           +S+D  +S +   N +TN    F   N SI++++   R +YFR  +++
Sbjct: 440 YSQDYAHSYFYLNNIYTNLMHAFPKYNASISLWKNLRRANYFRFFADM 487


>UniRef50_A2F5D1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 320

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +1

Query: 175 SVLFNSFYY-YRISRN*LTHLRNKNIFFVTILL*KALKLINYT 300
           S LF+S Y  YRIS+      R  N+ F++IL+  A+ L NY+
Sbjct: 34  SFLFSSIYVVYRISKKQFELSRYYNVIFISILVTVAMILTNYS 76


>UniRef50_A2EDL1 Cluster: Surface antigen BspA-like; n=3;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 447

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 177 RRLDFKFFSEDILNSNYVFFNCFTNASELFD----IRNVSINIFQYFIRYS 37
           +R++  +F+++I   NY F+NC      +FD    +  +SI  FQ  I  S
Sbjct: 29  KRIEISYFTQNI--DNYAFYNCINLEEVVFDQSSRLEQISIGTFQNCIHLS 77


>UniRef50_Q9G2W8 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=10; Craniata|Rep: NADH-ubiquinone oxidoreductase chain
           5 - Myxine glutinosa (Atlantic hagfish)
          Length = 601

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -3

Query: 440 AIPTFSAWYI*YNENLILRVYSRILLLSLLYCMNSKYILTLIL 312
           +I  FS WY+  + N +   Y  + L+S+L+ +++  +L LIL
Sbjct: 97  SIMQFSLWYMHEHNNTLFFKYLTMFLISMLFFLSANNLLQLIL 139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,043,527
Number of Sequences: 1657284
Number of extensions: 5647379
Number of successful extensions: 15033
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15029
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)