Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0035
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    47   5e-04
UniRef50_Q5BWR0 Cluster: SJCHGC08409 protein; n=1; Schistosoma j...    36   0.92 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.6  
UniRef50_A5HJ42 Cluster: SID1-like protein; n=4; Neoptera|Rep: S...    33   6.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +2

Query: 86  FLLLR*VDELTAHLVLSGYWSP 151
           FLLLR VDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q5BWR0 Cluster: SJCHGC08409 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08409 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 182

 Score = 35.9 bits (79), Expect = 0.92
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -1

Query: 507 IINVCVVRVIFFFLCILHTGFVCTNKLDWCFIGIVKSKPKLNHYIKCVSHLYKNEANLKE 328
           +I++C+V +  F     H      N +  CF+G +      + Y+KC+  +Y    NL E
Sbjct: 12  MISLCLVNLPLFGPPYTHILTTNVNIVRRCFVGCISPSDDPSFYLKCLDFVYNAYVNLPE 71

Query: 327 P 325
           P
Sbjct: 72  P 72


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 280 WYLPVRTHKRSYHQ 321
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_A5HJ42 Cluster: SID1-like protein; n=4; Neoptera|Rep:
           SID1-like protein - Aphis gossypii (Cotton aphid)
          Length = 766

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = -1

Query: 540 VKQTNTFGYE*IINVCVVRVIFFFLCILHTGFVCTNKLDWCFIGIVKSKP 391
           VK T  F Y+ IIN  +V VIF F+ +  T F  T   D   I I++ +P
Sbjct: 277 VKPTVDFNYQ-IINCLIVIVIFIFILVFTTFFYHTKGDDLKTIDIIQEEP 325


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,876,151
Number of Sequences: 1657284
Number of extensions: 12880898
Number of successful extensions: 24418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24404
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)