Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0032
         (425 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    43   0.002
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    33   1.9  
UniRef50_Q4S5M5 Cluster: Chromosome 9 SCAF14729, whole genome sh...    33   3.3  
UniRef50_Q7S239 Cluster: Putative uncharacterized protein NCU098...    32   5.7  
UniRef50_UPI0000D5762A Cluster: PREDICTED: similar to CG6040-PA;...    31   7.5  
UniRef50_Q6Z4I5 Cluster: DNA binding protein-like; n=4; Oryza sa...    31   9.9  
UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    31   9.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 43.2 bits (97), Expect = 0.002
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 412 FLLLRCVDELTAHLVLSGYW 353
           FLLLR VDELTAHLVLSGYW
Sbjct: 154 FLLLRWVDELTAHLVLSGYW 173


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -3

Query: 216 WYLPVQTHKRSYHQ 175
           WYLP +THKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q4S5M5 Cluster: Chromosome 9 SCAF14729, whole genome
           shotgun sequence; n=10; Euteleostomi|Rep: Chromosome 9
           SCAF14729, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 637

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 212 YHRPAYFCREAVM-RFGLKGGAAVVTILRP*NYISRCVAHLRCRC 343
           +H+P+Y     +    GL  GA+++TIL   +Y+   + H  CRC
Sbjct: 568 FHKPSYLISGDIGGHMGLFIGASILTILEIFDYLYEVIKHKLCRC 612


>UniRef50_Q7S239 Cluster: Putative uncharacterized protein
           NCU09875.1; n=2; Sordariales|Rep: Putative
           uncharacterized protein NCU09875.1 - Neurospora crassa
          Length = 520

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 22/56 (39%), Positives = 29/56 (51%)
 Frame = +3

Query: 57  GTNFSNEIRTQQMFTIDFHGEGITSCNKNQTRKIIICVITGGRTSCESARVGTTAP 224
           G + +  I T     +DFH E +TSC +N  RKIII  +T G    E   +G  AP
Sbjct: 91  GRDVTVVIPTVDPLGVDFH-ECLTSCARNGPRKIII--VTAGEDLYEKT-LGAVAP 142


>UniRef50_UPI0000D5762A Cluster: PREDICTED: similar to CG6040-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG6040-PA - Tribolium castaneum
          Length = 1048

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 310 DIVLRSQYSHNGCPTLQTETHYCFTAEIGGAVVPTR 203
           D++++ +    G PT +TET Y    E+  A+VP +
Sbjct: 543 DVLIKQKQYSGGVPTKKTETVYANIGEVRSAIVPNK 578


>UniRef50_Q6Z4I5 Cluster: DNA binding protein-like; n=4; Oryza
           sativa|Rep: DNA binding protein-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 544

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 51  LAGTNFSNEIRTQQMFTIDFHGEGITSC-NKNQTRKIIICVITGGRTSCESARVGTTAPP 227
           L+GT+   +    ++  +D  G GIT+C  +N+ +K    ++ G      + RV      
Sbjct: 28  LSGTSKRRDFTALELILVDEEGVGITACVGENEIQKFSTSIVEGHAYFLRNFRVSRQTKK 87

Query: 228 ISAV 239
           ++AV
Sbjct: 88  LNAV 91


>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 135 NKNQTRKIIICVITGGRTSCESARVGTTAPPISAVK 242
           +KN+ +K  + ++T G T C SA VGTT   +   K
Sbjct: 317 SKNKIKKKEVDLVTNGETVCGSANVGTTVEILETEK 352


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,871,650
Number of Sequences: 1657284
Number of extensions: 8662152
Number of successful extensions: 17417
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17413
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)