Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0028
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    40   0.075
UniRef50_Q4P4E9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 39.5 bits (88), Expect = 0.075
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -2

Query: 209 VSFFFFLMWLDELTAHLVLTGY*SP 135
           +S F  L W+DELTAHLVL+GY SP
Sbjct: 151 LSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q4P4E9 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 1698

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 242  FHVLSCFW*RFDEFHSAQASCSFCELILNASFNSKPEPV 358
            +H     W R D+F  + A+ +FCE  L+ SF+S+  P+
Sbjct: 1021 YHAAIDEWMRDDQFDRSPATTTFCEPFLSPSFSSRDSPL 1059


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,008,081
Number of Sequences: 1657284
Number of extensions: 13383507
Number of successful extensions: 30734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30729
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)