Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0077
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7QD52 Cluster: ENSANGP00000010910; n=2; Culicidae|Rep:...    59   1e-07
UniRef50_Q9VYA7 Cluster: CG2691-PA; n=3; Sophophora|Rep: CG2691-...    53   7e-06
UniRef50_Q5JTH9 Cluster: RRP12-like protein; n=29; Euteleostomi|...    49   9e-05
UniRef50_Q4RQG5 Cluster: Chromosome 17 SCAF15006, whole genome s...    46   8e-04
UniRef50_UPI0000E488AD Cluster: PREDICTED: hypothetical protein;...    38   0.29 
UniRef50_UPI00015B511C Cluster: PREDICTED: similar to LOC447949 ...    35   2.0  
UniRef50_UPI0000D570E7 Cluster: PREDICTED: similar to Protein KI...    33   4.7  
UniRef50_Q4SS41 Cluster: Chromosome 11 SCAF14479, whole genome s...    33   8.2  
UniRef50_A4I4K1 Cluster: Putative uncharacterized protein; n=3; ...    33   8.2  

>UniRef50_Q7QD52 Cluster: ENSANGP00000010910; n=2; Culicidae|Rep:
            ENSANGP00000010910 - Anopheles gambiae str. PEST
          Length = 1388

 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 32/85 (37%), Positives = 45/85 (52%)
 Frame = -1

Query: 339  GLHRHRRLQVQDRGEGDTQEFRFCGVCSATLGGDYRPXXXXXXXXXXXKHDPYAYLPLSR 160
            G+HR     V+    G + +       + + G +YR            KH+PYAY+PLSR
Sbjct: 1290 GIHRPTAASVKS---GYSSKSNRTAKSNVSTGAEYRTKKASGDMLRKGKHEPYAYVPLSR 1346

Query: 159  TNLNKRKKSVNSKQFKGIVKSKTKG 85
             +LN+RK+S N+ QFK IVK   KG
Sbjct: 1347 NSLNRRKRSKNAGQFKSIVKGARKG 1371


>UniRef50_Q9VYA7 Cluster: CG2691-PA; n=3; Sophophora|Rep: CG2691-PA -
            Drosophila melanogaster (Fruit fly)
          Length = 1384

 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 28/76 (36%), Positives = 40/76 (52%)
 Frame = -1

Query: 327  HRRLQVQDRGEGDTQEFRFCGVCSATLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLN 148
            HR+L     G  D    +     S   G +Y             K DPYAY+PL+R NLN
Sbjct: 1293 HRQLTA---GNSDAMSVKSGKSTSRPAGSEYGSKKAKGDMKKSGKLDPYAYIPLTRNNLN 1349

Query: 147  KRKKSVNSKQFKGIVK 100
            KRK+S+NS++FK +++
Sbjct: 1350 KRKRSMNSRKFKSVLR 1365



 Score = 37.5 bits (83), Expect = 0.29
 Identities = 22/58 (37%), Positives = 32/58 (55%)
 Frame = -2

Query: 425  KPSKLLKPGTKRRYDDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSAASVAL 252
            K  + L P   R+ DD +S++SG++        T  S+Y  GGKGIHR L +  S A+
Sbjct: 1255 KLQQKLVPKRVRKGDDAMSMKSGKT--------TASSRYTAGGKGIHRQLTAGNSDAM 1304


>UniRef50_Q5JTH9 Cluster: RRP12-like protein; n=29; Euteleostomi|Rep:
            RRP12-like protein - Homo sapiens (Human)
          Length = 1297

 Score = 49.2 bits (112), Expect = 9e-05
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = -1

Query: 246  GGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKRKKSVNSKQFKGIVKSKTKG 85
            G +Y+            + DPYAY+PL+R+ LN+RKK     QFKG+VK+  +G
Sbjct: 1230 GAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLNRRKKMKLQGQFKGLVKAARRG 1283


>UniRef50_Q4RQG5 Cluster: Chromosome 17 SCAF15006, whole genome
            shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
            SCAF15006, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 1345

 Score = 46.0 bits (104), Expect = 8e-04
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = -1

Query: 249  LGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKRKKSVNSKQFKGIVKSKTKG 85
            +G +Y+            K DPYAY+PL ++ LN+RK++     FKG+VK   KG
Sbjct: 1277 IGSEYKSKKGKGDVKKKGKLDPYAYIPLKKSQLNRRKRAKLQGHFKGMVKGAQKG 1331


>UniRef50_UPI0000E488AD Cluster: PREDICTED: hypothetical protein; n=1;
            Strongylocentrotus purpuratus|Rep: PREDICTED:
            hypothetical protein - Strongylocentrotus purpuratus
          Length = 1431

 Score = 37.5 bits (83), Expect = 0.29
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 189  DPYAYLPLSRTNLNKRKKSVNSKQFKGIVKSKTK 88
            DPYAYLPL+R  LN+R K   + Q+  + K  +K
Sbjct: 1340 DPYAYLPLNRQQLNRRMKKKTAGQWSSLGKGGSK 1373



 Score = 37.5 bits (83), Expect = 0.29
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 189  DPYAYLPLSRTNLNKRKKSVNSKQFKGIVKSKTK 88
            DPYAYLPL+R  LN+R K   + Q+  + K  +K
Sbjct: 1386 DPYAYLPLNRQQLNRRMKKKTAGQWSSLGKGGSK 1419


>UniRef50_UPI00015B511C Cluster: PREDICTED: similar to LOC447949
            protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
            to LOC447949 protein - Nasonia vitripennis
          Length = 1284

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 189  DPYAYLPLSRTNLNKR-KKSVNSKQFKGIVKSKTK 88
            DPYAY+PL R+ LN+R KK   +  +K ++    K
Sbjct: 1237 DPYAYIPLKRSTLNRRNKKMQGASGYKNLLSRSKK 1271


>UniRef50_UPI0000D570E7 Cluster: PREDICTED: similar to Protein
            KIAA0690; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to Protein KIAA0690 - Tribolium castaneum
          Length = 1288

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 258  SATLGGDYRPXXXXXXXXXXXKHDPYAYLPLSRTNLNKR 142
            S+  G +YR            K DPYAYLPL R+ +NKR
Sbjct: 1250 SSVPGSEYRGKRAKGDVKKKGKPDPYAYLPLRRSAINKR 1288


>UniRef50_Q4SS41 Cluster: Chromosome 11 SCAF14479, whole genome
           shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 11
           SCAF14479, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 708

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
 Frame = -2

Query: 560 AGSGLAPDGPTHHQRPGLXXXXDEPK--PSGXXXXXXXXXDNE---TQGGKPSKLLKPGT 396
           A  G  P GP HHQ PG       P   PSG         ++     +GGKP +  K   
Sbjct: 616 ANGGFFPSGPPHHQPPGAGVPPFSPPQGPSGFYMPGSQRTESSEPWAEGGKPPRRRKKVR 675

Query: 395 KRRYDDILSIRSGRSNRSRASTATVGS 315
           K      L++    + RS    +  GS
Sbjct: 676 KPFQSSRLALEVQPTFRSSREVSGSGS 702


>UniRef50_A4I4K1 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania infantum
          Length = 1261

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -2

Query: 389 RYDDILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNL 276
           R   ILS+RS    RS  STA  G +   GG+G H +L
Sbjct: 791 RSASILSMRSSSLGRSSPSTAAAGGRSGRGGRGHHGSL 828


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,194,942
Number of Sequences: 1657284
Number of extensions: 8035313
Number of successful extensions: 25334
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25304
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)