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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0001
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri...   137   2e-31
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B...   121   1e-26
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P...   120   2e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ...   100   3e-20
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ...    99   5e-20
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ...    98   1e-19
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ...    98   2e-19
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ...    97   3e-19
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI...    97   4e-19
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI...    97   4e-19
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI...    97   4e-19
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ...    96   7e-19
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498...    95   1e-18
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;...    93   7e-18
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp...    92   9e-18
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre...    92   9e-18
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|...    91   2e-17
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ...    90   4e-17
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ...    90   5e-17
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;...    85   2e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae...    84   2e-15
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|...    83   4e-15
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|...    83   4e-15
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R...    83   4e-15
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R...    83   4e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na...    83   6e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ...    83   6e-15
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol...    83   6e-15
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro...    82   1e-14
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na...    81   2e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F...    81   2e-14
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob...    73   5e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or...    73   6e-12
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap...    66   5e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co...    61   2e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ...    59   1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My...    58   2e-07
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu...    58   2e-07
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa...    57   3e-07
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N...    56   6e-07
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ...    55   1e-06
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu...    53   5e-06
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th...    53   7e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri...    52   2e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI...    51   2e-05
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach...    50   4e-05
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl...    48   1e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=...    48   1e-04
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ...    47   3e-04
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|...    47   5e-04
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;...    47   5e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di...    46   6e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A...    46   6e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub...    46   8e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti...    45   0.001
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit...    45   0.002
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3....    45   0.002
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4...    45   0.002
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym...    44   0.002
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ...    44   0.002
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq...    44   0.003
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=...    44   0.003
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B...    44   0.004
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver...    44   0.004
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M...    43   0.006
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha...    43   0.006
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ...    42   0.010
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter...    42   0.013
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|...    42   0.017
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9....    41   0.030
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c...    40   0.069
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl...    40   0.069
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela...    38   0.21 
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob...    38   0.28 
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac...    38   0.28 
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh...    37   0.37 
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9....    37   0.37 
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;...    37   0.48 
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ...    36   0.64 
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil...    36   1.1  
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni...    36   1.1  
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl...    35   2.0  
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid...    34   2.6  
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte...    33   4.5  
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=...    33   6.0  
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te...    33   6.0  
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha...    33   6.0  

>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
           Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
           subunit I - Periclimenes thermohydrophilus
          Length = 217

 Score =  137 bits (332), Expect = 2e-31
 Identities = 72/132 (54%), Positives = 87/132 (65%)
 Frame = -2

Query: 535 MAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILD 356
           MAV  T  TN G  S  I  +R             I+E PAKC+EKI  STD P CAI  
Sbjct: 42  MAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPL 101

Query: 355 ESGG*TVHPVPAPFCTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPII 176
            SGG TVHPVP P  TI L  + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPPI+
Sbjct: 102 ASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIM 161

Query: 175 IGITIKKNYNKS 140
           IG+T+KK   K+
Sbjct: 162 IGMTMKKIITKA 173



 Score = 63.7 bits (148), Expect = 4e-09
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = -1

Query: 644 IGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNK 537
           IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K
Sbjct: 6   IGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSK 41



 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 30/46 (65%), Positives = 33/46 (71%)
 Frame = -3

Query: 141 ACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 4
           A AVT+ L I S PI  PG PNSARIKSL DVP +P   PK+KYNV
Sbjct: 173 AWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217


>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
           Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
           cynthia ricini (Indian eri silkmoth)
          Length = 510

 Score =  121 bits (292), Expect = 1e-26
 Identities = 65/110 (59%), Positives = 71/110 (64%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL+LGAPD+AFPR+NN+ F              IV+NGAGTG TVYPPLSSNIAH 
Sbjct: 77  NWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHG 136

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 524
           G SVDLAIFSLHLAGISS                   SFDQ+PLFV AVG
Sbjct: 137 GSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVG 186



 Score = 59.3 bits (137), Expect = 8e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRNLNTSFFDPAGGGDPI
Sbjct: 200 AGAITMLLTDRNLNTSFFDPAGGGDPI 226



 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 27/47 (57%), Positives = 27/47 (57%)
 Frame = +2

Query: 2   GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
           GTLY                   AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13  GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHA 59


>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
           Panarthropoda|Rep: Cytochrome c oxidase subunit I -
           Pagyris cymothoe
          Length = 487

 Score =  120 bits (290), Expect = 2e-26
 Identities = 63/110 (57%), Positives = 71/110 (64%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL+LGAPD+AFPR+NN+ F              IV+NGAGTG TVYPPLSSNIAH 
Sbjct: 53  NWLIPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHG 112

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 524
           G SVDLAIFSLHLAGISS                   SFDQ+PLF+ AVG
Sbjct: 113 GSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVG 162



 Score = 59.3 bits (137), Expect = 8e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRNLNTSFFDPAGGGDPI
Sbjct: 176 AGAITMLLTDRNLNTSFFDPAGGGDPI 202



 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +2

Query: 74  ELGNPGSLIGDDQIYNTIVTAHA 142
           ELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13  ELGTPGSLIGDDQIYNTIVTAHA 35


>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
           Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
           rubiginosus
          Length = 504

 Score =  100 bits (239), Expect = 3e-20
 Identities = 56/109 (51%), Positives = 65/109 (59%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL++GAPD+AFPR+NN+ F               V+ GAGTG TVYPPL+ N+AH 
Sbjct: 81  NWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHA 140

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDLAIFSLHLAGISS                   S  Q PLFV +V
Sbjct: 141 GASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSV 189



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 204 AAGITMLLTDRNLNTTFFDPAGGGDPI 230



 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 24/47 (51%), Positives = 26/47 (55%)
 Frame = +2

Query: 2   GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
           GTLY                   AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17  GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHA 63


>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
           Bilateria|Rep: Cytochrome c oxidase subunit I -
           Homalopoma maculosa
          Length = 219

 Score =   99 bits (238), Expect = 5e-20
 Identities = 49/78 (62%), Positives = 56/78 (71%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL+LGAPD+AFPR+NN+ F               V++GAGTG TVYPPLS N AH 
Sbjct: 63  NWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHA 122

Query: 375 GRSVDLAIFSLHLAGISS 428
           G SVDLAIFSLHLAG+SS
Sbjct: 123 GPSVDLAIFSLHLAGVSS 140



 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN NTSFFDPAGGGDPI
Sbjct: 186 AGAITMLLTDRNFNTSFFDPAGGGDPI 212



 Score = 43.2 bits (97), Expect = 0.006
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 74  ELGNPGSLIGDDQIYNTIVTAHA 142
           ELG PGS IG+DQ+YN +VTAHA
Sbjct: 23  ELGQPGSFIGNDQLYNVVVTAHA 45


>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
           root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 516

 Score = 98.3 bits (234), Expect = 1e-19
 Identities = 54/109 (49%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL++GAPD+AFPR+NN+ F               V+ GAGTG TVYPPL+ N+AH 
Sbjct: 80  NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDL IFSLHLAG+SS                   S  Q PLFV AV
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAV 188



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPI 229



 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 23/47 (48%), Positives = 25/47 (53%)
 Frame = +2

Query: 2   GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
           GTLY                   AEL  PG+L+GDDQIYN IVTAHA
Sbjct: 16  GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62


>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
           cellular organisms|Rep: Cytochrome c oxidase subunit I -
           Pandaka lidwilli
          Length = 507

 Score = 97.9 bits (233), Expect = 2e-19
 Identities = 53/109 (48%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL++GAPD+AFPR+NN+ F               ++ GAGTG TVYPPL+ N+AH 
Sbjct: 69  NWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHA 128

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDL IFSLHLAGISS                   S  Q PLFV AV
Sbjct: 129 GASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAV 177



 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 23/47 (48%), Positives = 25/47 (53%)
 Frame = +2

Query: 2   GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
           GTLY                   AEL  PG+L+GDDQIYN IVTAHA
Sbjct: 5   GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 51



 Score = 38.3 bits (85), Expect = 0.16
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDP 624
           A  IT+LLTDRNLNT+FFDP
Sbjct: 192 AAGITMLLTDRNLNTTFFDP 211


>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
           Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
           - Placozoan sp. BZ2423
          Length = 498

 Score = 97.1 bits (231), Expect = 3e-19
 Identities = 51/109 (46%), Positives = 64/109 (58%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  VPL++GAPD+AFPR+NNI F              +V+ GAGTG TVYPPL+S  AH 
Sbjct: 81  NWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHS 140

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVD+AIFSLHLAG+SS                   +  ++PLFV +V
Sbjct: 141 GGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSV 189



 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDR  NT+FFDPAGGGDPI
Sbjct: 204 AGAITMLLTDRYFNTTFFDPAGGGDPI 230



 Score = 41.5 bits (93), Expect = 0.017
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +2

Query: 74  ELGNPGSLIGDDQIYNTIVTAHA 142
           EL +PGS++GDD +YN IVTAHA
Sbjct: 41  ELSSPGSMLGDDHLYNVIVTAHA 63


>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
           precursor [Contains: Truncated non-functional cytochrome
           oxidase 1; Intron-encoded endonuclease aI8 (EC
           3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
           endonuclease aI8 precursor [Contains: Truncated
           non-functional cytochrome oxidase 1; Intron-encoded
           endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
           fungus)
          Length = 645

 Score = 96.7 bits (230), Expect = 4e-19
 Identities = 52/109 (47%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVP+++GAPD+AFPR+NNI F               V+ GAGTG TVYPPLS   +H 
Sbjct: 80  NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDLAIFSLHL+GISS                   +  +LPLFV A+
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188



 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN NTSF+DPAGGGDPI
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPI 229


>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
           precursor [Contains: Truncated non-functional cytochrome
           oxidase 1; Intron-encoded endonuclease aI5 (EC
           3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
           intron-encoded endonuclease aI5 precursor [Contains:
           Truncated non-functional cytochrome oxidase 1;
           Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
           maydis (Smut fungus)
          Length = 536

 Score = 96.7 bits (230), Expect = 4e-19
 Identities = 52/109 (47%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVP+++GAPD+AFPR+NNI F               V+ GAGTG TVYPPLS   +H 
Sbjct: 80  NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDLAIFSLHL+GISS                   +  +LPLFV A+
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188



 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN NTSF+DPAGGGDPI
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPI 229


>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
           precursor [Contains: Truncated non-functional cytochrome
           oxidase 1; Intron-encoded endonuclease aI4 (EC
           3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
           intron-encoded endonuclease aI4 precursor [Contains:
           Truncated non-functional cytochrome oxidase 1;
           Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
           maydis (Smut fungus)
          Length = 530

 Score = 96.7 bits (230), Expect = 4e-19
 Identities = 52/109 (47%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVP+++GAPD+AFPR+NNI F               V+ GAGTG TVYPPLS   +H 
Sbjct: 80  NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDLAIFSLHL+GISS                   +  +LPLFV A+
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188


>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
           Eukaryota|Rep: Cytochrome c oxidase subunit I -
           Ophisurus macrorhynchos
          Length = 546

 Score = 95.9 bits (228), Expect = 7e-19
 Identities = 52/109 (47%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL++GAPD+AFPR+NN+ F               V+ GAGTG TVYPPL+ N+AH 
Sbjct: 80  NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDL IFSLHLAG+SS                   +  Q PLFV +V
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSV 188



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPI 229



 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 23/47 (48%), Positives = 25/47 (53%)
 Frame = +2

Query: 2   GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
           GTLY                   AEL  PG+L+GDDQIYN IVTAHA
Sbjct: 16  GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62


>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
           root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
           (Human)
          Length = 513

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 51/109 (46%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL++GAPD+AFPR+NN+ F              +V+ GAGTG TVYPPL+ N +H 
Sbjct: 80  NWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHP 139

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDL IFSLHLAG+SS                   +  Q PLFV +V
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSV 188



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  IT+LLTDRNLNT+FFDPAGGGDPI
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPI 229



 Score = 44.8 bits (101), Expect = 0.002
 Identities = 22/47 (46%), Positives = 25/47 (53%)
 Frame = +2

Query: 2   GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 142
           GTLY                   AELG PG+L+G+D IYN IVTAHA
Sbjct: 16  GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHA 62


>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
           cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 527

 Score = 92.7 bits (220), Expect = 7e-18
 Identities = 48/109 (44%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  VP+++GAPD+AFPR+NNI F              +V+ G+GTG TVYPPLS   +H 
Sbjct: 83  NWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHS 142

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G +VDLAIFSLHL+G+SS                   +  +LPLFV +V
Sbjct: 143 GGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSV 191



 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN NT+FFDPAGGGDPI
Sbjct: 206 AGAITMLLTDRNFNTTFFDPAGGGDPI 232


>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
           precursor (DNA endonuclease I-SceIV) [Contains:
           Truncated non-functional cytochrome oxidase 1; DNA
           endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
           endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
           Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
           endonuclease I-SceIV) [Contains: Truncated
           non-functional cytochrome oxidase 1; DNA endonuclease
           aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
           SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
          Length = 630

 Score = 92.3 bits (219), Expect = 9e-18
 Identities = 51/106 (48%), Positives = 60/106 (56%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL++GA D AFPRINNI F              +V++GAGTG TVYPPLSS  AH 
Sbjct: 81  NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
           G SVDLAIF+LHL  ISS                   +  +LPLFV
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186



 Score = 43.6 bits (98), Expect = 0.004
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           +  IT+LL DRN NTSFF+ +GGGDPI
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPI 230


>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
           precursor (DNA endonuclease I- SceII) [Contains:
           Truncated non-functional cytochrome oxidase 1; DNA
           endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
           endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
           Intron-encoded DNA endonuclease aI4 precursor (DNA
           endonuclease I- SceII) [Contains: Truncated
           non-functional cytochrome oxidase 1; DNA endonuclease
           aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
           - Saccharomyces cerevisiae (Baker's yeast)
          Length = 556

 Score = 92.3 bits (219), Expect = 9e-18
 Identities = 51/106 (48%), Positives = 60/106 (56%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL++GA D AFPRINNI F              +V++GAGTG TVYPPLSS  AH 
Sbjct: 81  NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
           G SVDLAIF+LHL  ISS                   +  +LPLFV
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186



 Score = 43.6 bits (98), Expect = 0.004
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           +  IT+LL DRN NTSFF+ +GGGDPI
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPI 230


>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
           group|Rep: Endonuclease - Saccharomyces servazzii
           (Yeast)
          Length = 675

 Score = 91.5 bits (217), Expect = 2e-17
 Identities = 50/109 (45%), Positives = 63/109 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N ++PL++GA D++FPRIN+I F              +V++GAGTG TVYPPLSS  AH 
Sbjct: 81  NYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDLAIFSLHL  ISS                   S  ++PLFV A+
Sbjct: 141 GPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAI 189



 Score = 44.8 bits (101), Expect = 0.002
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           +  IT+LL DRN NTSFF+ AGGGDPI
Sbjct: 204 SAGITMLLMDRNFNTSFFEVAGGGDPI 230


>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
           n=1; Saccharomyces castellii|Rep: I-SceII DNA
           endonuclease-like protein - Saccharomyces castellii
           (Yeast)
          Length = 598

 Score = 90.2 bits (214), Expect = 4e-17
 Identities = 49/109 (44%), Positives = 62/109 (56%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N ++PL++GA D AFPRINNI F              +V++GAGTG TVYPPL+S  AH 
Sbjct: 81  NYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHS 140

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDLAIF+LH+  ISS                   +  +LPLFV A+
Sbjct: 141 GPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAI 189



 Score = 44.4 bits (100), Expect = 0.002
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           +  +T+LL DRN NTSFF+ AGGGDPI
Sbjct: 204 SAGVTMLLLDRNFNTSFFEVAGGGDPI 230


>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
           cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
           Chondrus crispus (Carragheen)
          Length = 532

 Score = 89.8 bits (213), Expect = 5e-17
 Identities = 47/106 (44%), Positives = 61/106 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVP+++G+PD+AFPR+NNI F              +V+ G GTG TVYPPLSS  +H 
Sbjct: 88  NWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHS 147

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
           G +VDLAIFSLH++G SS                   S  ++PLFV
Sbjct: 148 GGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFV 193



 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN NTSFFD +GGGDPI
Sbjct: 211 AGAITMLLTDRNFNTSFFDASGGGDPI 237


>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
           Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
           melitaearum (Parasitoid wasp)
          Length = 499

 Score = 84.6 bits (200), Expect = 2e-15
 Identities = 41/78 (52%), Positives = 50/78 (64%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL+LG+PD++FPR+NN+ F               +  G GTG TVYPPLS  + H 
Sbjct: 64  NWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHG 123

Query: 375 GRSVDLAIFSLHLAGISS 428
           G SVDL IFSLHLAG SS
Sbjct: 124 GMSVDLGIFSLHLAGASS 141



 Score = 57.2 bits (132), Expect = 3e-07
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN+NTSFFDP+GGGDPI
Sbjct: 187 AGAITMLLTDRNMNTSFFDPSGGGDPI 213



 Score = 44.4 bits (100), Expect = 0.002
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +2

Query: 74  ELGNPGSLIGDDQIYNTIVTAHA 142
           ELG PGSLIG+DQIYN+IVT+HA
Sbjct: 24  ELGMPGSLIGNDQIYNSIVTSHA 46


>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
           cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
           cretinus
          Length = 153

 Score = 84.2 bits (199), Expect = 2e-15
 Identities = 55/144 (38%), Positives = 67/144 (46%)
 Frame = +3

Query: 210 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGRSVD 389
           L+LGAPD+AFPR+NN+ F              +V+NGAGTG TVYPPLSS  AH G SVD
Sbjct: 1   LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60

Query: 390 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGXXXXXXXXXXXCFSW 569
           LAI+S  +  + S                   S   + +                 CFS 
Sbjct: 61  LAIYST-VINMRSAGITLDRFFFTFSSNFLNFSITFICMI---CCNYCYFITSFFTCFSS 116

Query: 570 SYYNIINRSKLKYIIF*SCWRRRP 641
           S+Y IIN  K KY IF   W   P
Sbjct: 117 SHYYIINWPKSKYFIFWPNWSSSP 140


>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
           stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
          Length = 763

 Score = 83.4 bits (197), Expect = 4e-15
 Identities = 43/109 (39%), Positives = 60/109 (55%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL +G+ D AFPRINN+ F              ++  G G+G T+YPPL+S  +H 
Sbjct: 98  NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G S+D+AIF+LHL+G+SS                    + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206



 Score = 41.1 bits (92), Expect = 0.022
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  +T+LL DRN NTSFF  +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247


>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
           stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
          Length = 676

 Score = 83.4 bits (197), Expect = 4e-15
 Identities = 43/109 (39%), Positives = 60/109 (55%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL +G+ D AFPRINN+ F              ++  G G+G T+YPPL+S  +H 
Sbjct: 98  NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G S+D+AIF+LHL+G+SS                    + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206



 Score = 41.1 bits (92), Expect = 0.022
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  +T+LL DRN NTSFF  +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247


>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
           Cox-i3 protein - Candida stellata (Yeast)
          Length = 588

 Score = 83.4 bits (197), Expect = 4e-15
 Identities = 43/109 (39%), Positives = 60/109 (55%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL +G+ D AFPRINN+ F              ++  G G+G T+YPPL+S  +H 
Sbjct: 98  NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G S+D+AIF+LHL+G+SS                    + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206



 Score = 41.1 bits (92), Expect = 0.022
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  +T+LL DRN NTSFF  +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247


>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
           Cox-i2 protein - Candida stellata (Yeast)
          Length = 586

 Score = 83.4 bits (197), Expect = 4e-15
 Identities = 43/109 (39%), Positives = 60/109 (55%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL +G+ D AFPRINN+ F              ++  G G+G T+YPPL+S  +H 
Sbjct: 98  NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G S+D+AIF+LHL+G+SS                    + +LPLFV +V
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206



 Score = 41.1 bits (92), Expect = 0.022
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  +T+LL DRN NTSFF  +GGGDP+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPL 247


>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
           Naupactini|Rep: Cytochrome c oxidase subunit I -
           Galapaganus collaris
          Length = 406

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 49/104 (47%), Positives = 57/104 (54%)
 Frame = +3

Query: 210 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGRSVD 389
           L LGAPD  FPR  N+ F               V+ GAGTG TV PPLS+NIAH G SVD
Sbjct: 4   LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63

Query: 390 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           LAIFSLH+AG+ S                   +  ++PLFV AV
Sbjct: 64  LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAV 107



 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN+NTSFFDPAGGGDPI
Sbjct: 122 AGAITMLLTDRNINTSFFDPAGGGDPI 148


>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
           Eukaryota|Rep: Cytochrome c oxidase subunit I -
           Paracoccidioides brasiliensis
          Length = 710

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+P+++G PD+AFPR+NN+ +              I++NG GTG T+YPPLS   +H 
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHS 166

Query: 375 GRSVDLAIFSLHLAGISS 428
              VDL IF LHL+GISS
Sbjct: 167 SMGVDLGIFGLHLSGISS 184



 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A AIT+LLTDRNLNTSF++ AGGGD I
Sbjct: 230 AAAITMLLTDRNLNTSFYELAGGGDAI 256


>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
           polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
           Cytochrome oxidase subunits 1 and 2 polyprotein -
           Phaeosphaeria nodorum SN15
          Length = 789

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 41/78 (52%), Positives = 50/78 (64%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL LG PD+ FPR+NNI +               ++NG GTG T+YPPLS   +H 
Sbjct: 81  NFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHS 140

Query: 375 GRSVDLAIFSLHLAGISS 428
           G SVDLAIF LHL+GISS
Sbjct: 141 GPSVDLAIFGLHLSGISS 158



 Score = 49.6 bits (113), Expect = 6e-05
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AG IT++LTDRN NTSFF+ AGGGDPI
Sbjct: 204 AGGITMVLTDRNFNTSFFEVAGGGDPI 230


>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
           group|Rep: COX1-i5 protein - Yarrowia lipolytica
           (Candida lipolytica)
          Length = 608

 Score = 81.8 bits (193), Expect = 1e-14
 Identities = 46/109 (42%), Positives = 59/109 (54%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL+LGA D+AF R+NNI F              +V+ GAGTG TVY PL+   +H 
Sbjct: 86  NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHS 145

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G +VDLAIFSLHL+G SS                    ++ +PLF  AV
Sbjct: 146 GPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAV 194



 Score = 36.7 bits (81), Expect = 0.48
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  +T+ + DRN NTSFF+ AGGGD +
Sbjct: 209 AAGLTMGIFDRNFNTSFFEYAGGGDAV 235


>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
           Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
           Naegleria gruberi
          Length = 633

 Score = 81.0 bits (191), Expect = 2e-14
 Identities = 45/109 (41%), Positives = 54/109 (49%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  VP+++GAPD++FPR+NN  F                + G GTG TVYPPLSS  +H 
Sbjct: 84  NYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHS 143

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           G SVDL IFS HL GI S                       LPLFV +V
Sbjct: 144 GASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSV 192



 Score = 46.0 bits (104), Expect = 8e-04
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A AIT+LL DRN NTSF+DP GGGD +
Sbjct: 207 AAAITLLLFDRNFNTSFYDPVGGGDVV 233


>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
           Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
           - Trichoderma reesei (Hypocrea jecorina)
          Length = 635

 Score = 81.0 bits (191), Expect = 2e-14
 Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TV----YPPLSSN 362
           N L+PL++G PD+AFPR+NNI F              I++ G GTG T+    YPPLS  
Sbjct: 109 NFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGL 168

Query: 363 IAHRGRSVDLAIFSLHLAGISS 428
            +H G SVDLAIF+LHL+G+SS
Sbjct: 169 QSHSGPSVDLAIFALHLSGVSS 190



 Score = 45.6 bits (103), Expect = 0.001
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 574 ITILLTDRNLNTSFFDPAGGGDPI 645
           IT++LTDRN NTSFF+ AGGGDPI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPI 255


>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
           Alphaproteobacteria|Rep: Cytochrome-c oxidase -
           Sphingomonas sp. SKA58
          Length = 556

 Score = 73.3 bits (172), Expect = 5e-12
 Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQ----NGAGTG*TVYPPLSSN 362
           N  VP+++GAPD+AFPR+NNI F               V     NGAGTG TVY PLS++
Sbjct: 120 NWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS 179

Query: 363 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
               G +VD+AI SLH+AG SS                   +  ++PLFV +V
Sbjct: 180 -GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSV 231



 Score = 45.6 bits (103), Expect = 0.001
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDP 642
           A AIT+LLTDRN  T+F+D AGGGDP
Sbjct: 246 AAAITMLLTDRNFGTTFYDAAGGGDP 271


>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
           organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
           (strain CCS1)
          Length = 628

 Score = 72.9 bits (171), Expect = 6e-12
 Identities = 36/109 (33%), Positives = 56/109 (51%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  +PL++GAPD+AFPR+NN+ +              ++  GAG G T YPP+S+     
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVET 245

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
            R+VD AIF++H++G SS                   +  ++PLF  +V
Sbjct: 246 SRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSV 294



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGAIT+LLTDRN  T+FFDPAGGGDPI
Sbjct: 309 AGAITMLLTDRNFGTTFFDPAGGGDPI 335


>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
           Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
           Aplidium nordmanni
          Length = 227

 Score = 66.5 bits (155), Expect = 5e-10
 Identities = 36/76 (47%), Positives = 43/76 (56%)
 Frame = +3

Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
           L PL +GAP +A PR+ N+ F               +  G G    VYPP SS +AH   
Sbjct: 72  LXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSG 131

Query: 381 SVDLAIFSLHLAGISS 428
           +VDL IF LHLAGISS
Sbjct: 132 AVDLGIFXLHLAGISS 147


>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
           Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
           unguis
          Length = 573

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  +PL++   D++ PR+NN+                +   G G G T+YPPLS++    
Sbjct: 82  NWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMD 141

Query: 375 GRSVDLAIFSLHLAGISS 428
           G  +DLA+FSLH+AG+SS
Sbjct: 142 GLPIDLAVFSLHMAGMSS 159



 Score = 39.9 bits (89), Expect = 0.052
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  +T+LL DR+ +TSF+ P GGGDPI
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPI 232


>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
           Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
           borealis
          Length = 513

 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 28/54 (51%), Positives = 35/54 (64%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLS 356
           N LVPL++GAPD+AFPR+NN+ F               V+ GAGTG TVYPPL+
Sbjct: 81  NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134



 Score = 42.3 bits (95), Expect = 0.010
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +2

Query: 71  AELGNPGSLIGDDQIYNTIVTAHA 142
           AELG PG+L+GDDQ  N IVTAHA
Sbjct: 40  AELGQPGTLLGDDQXXNVIVTAHA 63


>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
           Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
           subunit I - Myrmarachne sp. G FSC-2006
          Length = 129

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +3

Query: 306 IVQNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 428
           +V+ G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12  MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52


>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
           Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
           Leishmania tarentolae (Sauroleishmania tarentolae)
          Length = 549

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 27/78 (34%), Positives = 40/78 (51%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  +P++ G PD+ FPR+NN+ F              + + G G G T+YP L     H 
Sbjct: 83  NYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHS 142

Query: 375 GRSVDLAIFSLHLAGISS 428
             + D  +F++HL GISS
Sbjct: 143 SLACDFVMFAVHLLGISS 160



 Score = 42.3 bits (95), Expect = 0.010
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AG +T++L DRN NTSF+D  GGGD I
Sbjct: 206 AGGVTLILCDRNFNTSFYDVVGGGDLI 232


>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
           Watasenia scintillans|Rep: Cytochrome c oxidase subunit
           I - Watasenia scintillans (Sparkling enope)
          Length = 217

 Score = 57.2 bits (132), Expect = 3e-07
 Identities = 35/78 (44%), Positives = 42/78 (53%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N LVPL+LGAPD+AFPR+NN+ F              +   G      +  PL       
Sbjct: 64  NWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISA 121

Query: 375 GRSVDLAIFSLHLAGISS 428
           G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139



 Score = 41.9 bits (94), Expect = 0.013
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +2

Query: 74  ELGNPGSLIGDDQIYNTIVTAH 139
           ELG PGSL+ DDQ+YN +VTAH
Sbjct: 24  ELGQPGSLLNDDQLYNVVVTAH 45


>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
           Nematoda|Rep: Cytochrome c oxidase subunit I -
           Onchocerca volvulus
          Length = 548

 Score = 56.4 bits (130), Expect = 6e-07
 Identities = 33/106 (31%), Positives = 46/106 (43%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N ++PL+LGAP++AFPR+N + F               +  G G+  T YPPLS      
Sbjct: 91  NWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQP 149

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
             S+D  I  LH  GI S                   + DQ+ +FV
Sbjct: 150 ELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFV 195



 Score = 37.9 bits (84), Expect = 0.21
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AG++  LL DRN NTSF+D   GG+P+
Sbjct: 213 AGSLLFLLLDRNFNTSFYDTKKGGNPL 239


>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
           Alveolata|Rep: Cytochrome c oxidase subunit 1 -
           Plasmodium falciparum
          Length = 476

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  +P++ G+P++A+PRIN+I                  + G GTG T+YPPLS+++   
Sbjct: 85  NYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSL 144

Query: 375 GR-SVDLAIFSLHLAGISS 428
              +VD+ IF L ++G++S
Sbjct: 145 SPVAVDVIIFGLLVSGVAS 163



 Score = 35.1 bits (77), Expect = 1.5
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 568 GAITILLTDRNLNTSFFDPAGGGDPI 645
           G + +LL+D + NT FFDP   GDPI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPI 235


>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
           Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
           1 - Munidopsis verrucosus
          Length = 154

 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +3

Query: 348 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
           PL+S+IAH G SVD+AIFSLHLAG+SS                   + D++PLF+ AV
Sbjct: 72  PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAV 129



 Score = 45.2 bits (102), Expect = 0.001
 Identities = 22/46 (47%), Positives = 23/46 (50%)
 Frame = +2

Query: 170 TYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 307
           TYYNW IWKL             P NK YKILT  PL Y    K+N
Sbjct: 24  TYYNWWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69


>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
           Theileria|Rep: Cytochrome c oxidase subunit 1 -
           Theileria parva
          Length = 481

 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 28/78 (35%), Positives = 44/78 (56%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L P++LG  D+ +PR+N                   ++ G+GTG T+YPPLS+++++ 
Sbjct: 88  NYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNV 147

Query: 375 GRSVDLAIFSLHLAGISS 428
           G  +D  IF L  AGI+S
Sbjct: 148 G--IDFIIFGLLAAGIAS 163


>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
           Cystobacterineae|Rep: Cytochrome-c oxidase -
           Anaeromyxobacter sp. Fw109-5
          Length = 596

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPPLSSNIAH 371
           N L+PL++GA D+AFPR+N   F                  G AG G T Y PLS+N+  
Sbjct: 112 NLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGM 171

Query: 372 RGRSVDLAIFSLHLAGISS 428
            G    L + ++ + G+SS
Sbjct: 172 PGMGQTLVVAAIFVTGVSS 190


>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
           precursor [Contains: Truncated non-functional cytochrome
           oxidase 1; Intron-encoded endonuclease aI2 (EC
           3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
           intron-encoded endonuclease aI2 precursor [Contains:
           Truncated non-functional cytochrome oxidase 1;
           Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
           maydis (Smut fungus)
          Length = 533

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 27/57 (47%), Positives = 33/57 (57%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNI 365
           N LVP+++GAPD+AFPR+NNI F               V+ GAGTG TV   LS  I
Sbjct: 80  NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136


>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
           Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
           I - Pachymerium ferrugineum
          Length = 219

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 32/83 (38%), Positives = 37/83 (44%)
 Frame = +2

Query: 161 YSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCTKWCRNRMNS 340
           YS TYYN  I KL             P NK +KIL  TPL Y  N    C+K C + +NS
Sbjct: 53  YSNTYYNSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNS 112

Query: 341 LPPTFI*YRT*RKIRRSCYFFTT 409
           LP     Y T    R   +F  T
Sbjct: 113 LPAPCCKYLTLGPFRSYNHFCPT 135


>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
           gracilis|Rep: Cytochrome oxidase subunit I - Euglena
           gracilis
          Length = 495

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQN-GAGTG*TVYPPLSSNIAH 371
           N L+P+++G  +++ PR+N I F              ++ +    +G T+YPPLS+  A 
Sbjct: 90  NYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDAD 149

Query: 372 R-GRSVDLAIFSLHLAGISS 428
             G ++DL++  +H+ GISS
Sbjct: 150 NIGVNIDLSLLVVHVLGISS 169


>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
           cellular organisms|Rep: Cytochrome C oxidase subunit I
           /III - Pyrobaculum aerophilum
          Length = 800

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-QNGAGTG*TVYPPLSSNIAH 371
           N LVP ++GAPD+ +PRIN + F              +  Q+G   G T+YPPLS+    
Sbjct: 86  NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143

Query: 372 RGRSVDLAIFSLHLAGISS 428
           +   VDL +  + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162


>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
           (Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
           subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
           Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
           (Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
           subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
           subtilis
          Length = 649

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 25/78 (32%), Positives = 37/78 (47%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N +VPL +GA D+AFP +NN+ F              ++      G T Y PL+SN    
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSP 179

Query: 375 GRSVDLAIFSLHLAGISS 428
           G   +  +  L +AGI +
Sbjct: 180 GPGENYYLLGLQIAGIGT 197


>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
           Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
           maris DSM 8797
          Length = 754

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 31/106 (29%), Positives = 42/106 (39%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  VPL++GA D+AFPR+N+  F              +  +    G   Y PLSS     
Sbjct: 99  NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
            + VD  I  L + GI S                   S  ++PLFV
Sbjct: 159 LQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFV 204


>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
           Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
           - Aeropyrum pernix
          Length = 815

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGA-GTG*TVYPPLSSNIAH 371
           N +VPL +GA D+AFPR+N + +                ++GA   G T+Y PL++ I  
Sbjct: 88  NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147

Query: 372 RGRSVDLAIFSLHLAGIS 425
            G  +DLA  ++ L  +S
Sbjct: 148 PGIGLDLAALAIFLFSLS 165


>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
           Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
           Dicyema misakiense
          Length = 473

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 30/78 (38%), Positives = 41/78 (52%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+P     PD+ FPR+N + F              ++ + A  G T YPPLSS     
Sbjct: 75  NLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----L 125

Query: 375 GRSVDLAIFSLHLAGISS 428
             SV+ ++FSLHLAGI+S
Sbjct: 126 SPSVEFSVFSLHLAGIAS 143



 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  IT++LTD++L T F+D   GGDP+
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPL 213


>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
           Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
           1 - Corynebacterium glutamicum (Brevibacterium flavum)
          Length = 584

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGT-G*TVYPPLSSNIAH 371
           N ++PL +GAPD+AFPR+N   F              +   GA   G T+Y PLS  I  
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164

Query: 372 RGRSVDLAIFSLHLAGISS 428
            G   D+ I  +   GI S
Sbjct: 165 PGLGSDMWIVGVGATGIGS 183


>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
           subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
           terminal oxidase, subunit I - Haloquadratum walsbyi
           (strain DSM 16790)
          Length = 634

 Score = 46.0 bits (104), Expect = 8e-04
 Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI---VQNGAGTG*TVYPPLS--- 356
           N L+PL++GA D+AFPRIN I F                      A TG T+Y PLS   
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGE 220

Query: 357 --SNIAHRGRSVDLAIFSLHLAGISS 428
              N A+ G  VDL +  LHL+G+S+
Sbjct: 221 GMGNQANAG--VDLMLLGLHLSGVSA 244


>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
           lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
           (Candida lipolytica)
          Length = 457

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 25/57 (43%), Positives = 32/57 (56%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNI 365
           N L+PL+LGA D+AF R+NNI F              +V+ GAGTG TV    SS +
Sbjct: 86  NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142


>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
           n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
           subunit I - Chromobacterium violaceum
          Length = 680

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 27/78 (34%), Positives = 39/78 (50%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N +VPL +GA D+AFP +N++ F               V N A TG   YPPL+      
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184

Query: 375 GRSVDLAIFSLHLAGISS 428
              VD  I++L ++GI +
Sbjct: 185 DVGVDYYIWALQISGIGT 202


>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
           (Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
           1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
           Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
           oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
           BO(3) subunit 1) - Pseudomonas putida
          Length = 672

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 27/78 (34%), Positives = 38/78 (48%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  VPL +GA D+AFP +N++ F               V   A TG   YPPL+      
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183

Query: 375 GRSVDLAIFSLHLAGISS 428
           G  VD  I++L L+G+ +
Sbjct: 184 GVGVDYYIWALQLSGLGT 201


>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
           Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
           - Halobacterium salinarium (Halobacterium halobium)
          Length = 593

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQN--GAGTG*TVYPPLSSNIA 368
           N  +PL++ A D+AFPRIN I F              ++     A T  T+Y PLS  ++
Sbjct: 135 NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS 194

Query: 369 HRGRSVDLAIFSLHLAGISS 428
               +VD+ +  LHL G+S+
Sbjct: 195 --SPAVDMMMLGLHLTGVSA 212


>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
           polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
           (Liverwort)
          Length = 434

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TV 341
           N  VP+++G+PD+AFPR+NNI F              +V+ G G+G TV
Sbjct: 84  NWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132


>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
           Bilateria|Rep: Cytochrome c oxidase subunit I -
           Schistosoma mansoni (Blood fluke)
          Length = 609

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A  IT+LL DRN  T+FF+P+GGGDPI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPI 319



 Score = 44.0 bits (99), Expect = 0.003
 Identities = 28/78 (35%), Positives = 38/78 (48%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N  +P+ L   D+  PR+N++                 +  G G G T+YPPLS      
Sbjct: 178 NYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELS--LYYGCGIGWTLYPPLSI-WEGS 234

Query: 375 GRSVDLAIFSLHLAGISS 428
           G  VD  +FSLHLAG+SS
Sbjct: 235 GFGVDYLMFSLHLAGVSS 252


>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
           Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
           Aquifex aeolicus
          Length = 485

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 28/78 (35%), Positives = 38/78 (48%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL++GA D+AFPR+N + +              I  N   T  T YPP S N  + 
Sbjct: 38  NFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--ND 95

Query: 375 GRSVDLAIFSLHLAGISS 428
                L +F +HL G SS
Sbjct: 96  AGVTALYVFVMHLLGASS 113



 Score = 40.7 bits (91), Expect = 0.030
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AGA+T+L  D+ L T+FF+PA GGDP+
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPL 185


>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
           Bacteria|Rep: Cytochrome c oxidase subunit I type -
           Anaeromyxobacter sp. Fw109-5
          Length = 555

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 33/106 (31%), Positives = 46/106 (43%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+P+++GA D+AFP++N + F              +VQ GA TG T Y P S+    +
Sbjct: 103 NFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITK 161

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
              V L  F L   G SS                    + +LPLFV
Sbjct: 162 VVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFV 204


>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
           Bacteria|Rep: Cytochrome c oxidase subunit I -
           Synechococcus sp. (strain CC9311)
          Length = 564

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPPLS--SNI 365
           N L+P ++GAPD+AFP++N   F                  G A +G   YPP+S  + +
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPL 162

Query: 366 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
            H      L I ++ L+GISS                    F ++P+FV
Sbjct: 163 GHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFV 211



 Score = 34.7 bits (76), Expect = 2.0
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 568 GAITILLTDRNLNTSFFDPAGGGDPI 645
           G   +LL D +  TSFF P GGGDP+
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPV 255


>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
           Kluyveromyces thermotolerans|Rep: Putative DNA
           endonuclease - Kluyveromyces thermotolerans (Yeast)
          Length = 542

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 21/49 (42%), Positives = 30/49 (61%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TV 341
           N L+PL++GA D++F R+NNI F              +V++GAGTG TV
Sbjct: 81  NYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129


>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
           Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
           subunit I - Myxococcus xanthus (strain DK 1622)
          Length = 556

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 31/109 (28%), Positives = 47/109 (43%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N ++PL+LGA D+AFPR+N +                ++  G  TG T Y P S   AH 
Sbjct: 110 NFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHT 165

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
             +V   +F   + G SS                   ++ ++PLFV A+
Sbjct: 166 TTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAI 214


>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
           Bohadschia argus|Rep: Cytochrome oxidase subunit I -
           Bohadschia argus
          Length = 247

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 30/103 (29%), Positives = 41/103 (39%)
 Frame = +2

Query: 107 DQIYNTIVTAHAXXXXXXYSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPY 286
           DQIYN IVTA        +     +  +W L             P N+  ++L    L +
Sbjct: 1   DQIYNVIVTASRFSDDCLHGNANNDSSLWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFH 60

Query: 287 IINFKKNCTKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFS 415
                 +  K CRNRMN+LP         R +    YFF+T S
Sbjct: 61  STPSISSSGKSCRNRMNNLPTLIQNNSPRRSVSSPRYFFSTSS 103


>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
           n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
           ubiquinol oxidase subunit I - Carsonella ruddii (strain
           PV)
          Length = 606

 Score = 42.3 bits (95), Expect = 0.010
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N ++PL +G+ D+AFP +N + F              I+   A TG   YPPLS      
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178

Query: 375 GRSVDLAIFSLHLAGISS 428
              VD   +S+ ++GI +
Sbjct: 179 WVGVDYWNWSIQISGIGT 196


>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
           Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
           eutropha (strain C71)
          Length = 703

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 26/78 (33%), Positives = 38/78 (48%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N +VPL +GA D+AFP +N+I                +V   +  G   YPP +  + + 
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203

Query: 375 GRSVDLAIFSLHLAGISS 428
           G  VD  I+SL LA + S
Sbjct: 204 GIGVDYWIWSLTLASLGS 221


>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
           Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
           RS-1
          Length = 641

 Score = 41.5 bits (93), Expect = 0.017
 Identities = 27/106 (25%), Positives = 41/106 (38%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N +VPL++GA D+AFPR+N +                 V      G   Y PL+      
Sbjct: 98  NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAP 157

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
              VD  I  + L G++S                   + +++PLFV
Sbjct: 158 TAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFV 203


>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
           1.9.3.1) (Cytochrome c oxidase polypeptide I)
           (Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
           n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
           (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
           (Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
           Synechocystis sp. (strain PCC 6803)
          Length = 551

 Score = 40.7 bits (91), Expect = 0.030
 Identities = 29/78 (37%), Positives = 36/78 (46%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L+PL++G  D+AFPR+N + F               V      G T YPPLS      
Sbjct: 94  NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKW 152

Query: 375 GRSVDLAIFSLHLAGISS 428
           G   +L I SL L G SS
Sbjct: 153 GE--ELWILSLLLVGTSS 168



 Score = 33.9 bits (74), Expect = 3.4
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A A+ +L  D    TSFF+P GGGDP+
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPV 240


>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
           cellular organisms|Rep: Cytochrome C oxidase subunit I -
           Rhizobium loti (Mesorhizobium loti)
          Length = 623

 Score = 39.5 bits (88), Expect = 0.069
 Identities = 27/104 (25%), Positives = 38/104 (36%)
 Frame = +3

Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
           LVPL++G   IAFPR+N   +               V  G   G   Y PLS      G+
Sbjct: 98  LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157

Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
             D+    +    +S+                   S D++PLFV
Sbjct: 158 RADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFV 201


>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
           Blastopirellula marina DSM 3645|Rep: Cytochrome c
           oxidase subunit I - Blastopirellula marina DSM 3645
          Length = 595

 Score = 39.5 bits (88), Expect = 0.069
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQ-NGAGTG*TVYPPLS---SN 362
           N L+PL++GA D+AFP +N + +                  +GA  G T YPPLS   ++
Sbjct: 114 NFLIPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTTS 173

Query: 363 IAHRGRSVDLAIFSLHLAGISS 428
               G +  L +  +   G+SS
Sbjct: 174 APSSGAAQTLWLLGVTTVGVSS 195


>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
           Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
           - Celatoblatta vulgaris
          Length = 134

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +3

Query: 558 CFSWSYYNIINRSKLKYIIF 617
           C  WSYYN IN SKLKYI+F
Sbjct: 99  CSCWSYYNTINWSKLKYILF 118


>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
           Proteobacteria|Rep: Quinol oxidase subunit I -
           Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
          Length = 825

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 22/103 (21%), Positives = 42/103 (40%)
 Frame = +3

Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
           L+P +LG+ D+A+PR++   F              +      +G  +YPPL+S +   G 
Sbjct: 98  LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGI 157

Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 509
           + D  +  +    IS+                   S D++P++
Sbjct: 158 NSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200


>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
           shibae DFL 12|Rep: Cytochrome-c oxidase -
           Dinoroseobacter shibae DFL 12
          Length = 853

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 21/76 (27%), Positives = 34/76 (44%)
 Frame = +3

Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
           L+PL++GA D+ FPR+    +              +       G  +Y PLS++    G 
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183

Query: 381 SVDLAIFSLHLAGISS 428
           S D  +  + LA I+S
Sbjct: 184 SADFWLIGITLAEIAS 199


>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
           Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
           Roseovarius nubinhibens ISM
          Length = 818

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 24/103 (23%), Positives = 40/103 (38%)
 Frame = +3

Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
           L+P +LG+ D+AFPR+    F              +      +G  +YPPLSS +   G 
Sbjct: 98  LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157

Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 509
           + D  +  +    IS+                   S  ++P+F
Sbjct: 158 NSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIF 200


>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
           1.9.3.1) (Cytochrome c oxidase polypeptide I)
           (Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
           aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
           oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
           polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
           subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
          Length = 622

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 24/105 (22%), Positives = 42/105 (40%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N +VPL +GA D++FP +N + F               +      G T Y  LS  +  +
Sbjct: 91  NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSK 148

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 509
           G  +D  +  L ++G+ +                   ++ +LPLF
Sbjct: 149 GHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193


>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
           n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
           polypeptide I/III - Picrophilus torridus
          Length = 841

 Score = 36.7 bits (81), Expect = 0.48
 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
 Frame = +3

Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPPLSSNIAHRG 377
           L+PL +G+ D+ +PR+N + +               +  G   TG TVY PLSS      
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170

Query: 378 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
              D A  ++ L GI +                       LPLFV AV
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAV 218


>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
           1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
           thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
           (EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
           thermophilus (strain HB8 / ATCC 27634 / DSM 579)
          Length = 791

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGA-GTG*TVYPPLSSNIAH 371
           N +VPL+LGA D+A PR+N   +                  GA   G T Y P S   A 
Sbjct: 92  NFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQ 148

Query: 372 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
               VD  + ++ L G SS                   S  ++P++V +V
Sbjct: 149 SESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSV 198


>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
           flagellatus KT|Rep: Cytochrome-c oxidase -
           Methylobacillus flagellatus (strain KT / ATCC 51484 /
           DSM 6875)
          Length = 631

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 24/107 (22%), Positives = 41/107 (38%)
 Frame = +3

Query: 201 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHRGR 380
           ++PL+LG  D+ FPR+N   +              +++     G   YPPL+      G 
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164

Query: 381 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 521
            +D     +    IS+                   S +++P+FV AV
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211


>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
           (EC 1.9.3.1) (Alternative cytochrome c oxidase
           polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
           subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
           oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
           oxidase polypeptide I) (Cytochrome BB3 subunit 1)
           (Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
          Length = 591

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNG-AGTG*TVYPP 350
           N L+PL++GA D+ FP +N + +               V  G  G G T+YPP
Sbjct: 107 NYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159


>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
           Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
           subunit I - Planctomyces maris DSM 8797
          Length = 606

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLS 356
           N L+PL++GA D+AFP++N + +                  G   G T YP L+
Sbjct: 118 NFLIPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLA 171


>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
           oxidase, subunit 1; n=2; Thermoprotei|Rep:
           Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
           Cenarchaeum symbiosum
          Length = 508

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           A A+ +LLTDR   + FF+PA GGDPI
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPI 231


>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
           Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
           cenocepacia MC0-3
          Length = 1004

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 27/106 (25%), Positives = 41/106 (38%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSSNIAHR 374
           N L PL+LG+ D+AFPR+    +               +      G   Y PL+S     
Sbjct: 116 NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSA 175

Query: 375 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 512
           G ++D+    + L GIS+                   S D+LP+ V
Sbjct: 176 GANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIV 221


>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
           Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
           1 - Beggiatoa sp. PS
          Length = 525

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLS----SN 362
           N  +PL++GA D+AFPR+N +                 + +      T YPP S     N
Sbjct: 83  NYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSIITHGN 142

Query: 363 IAHRGRSVDLAIFSLHLAGIS 425
            A    SV L  F+  L G++
Sbjct: 143 TAFYTFSVLLLGFASILGGVN 163


>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
           Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
           subunit I - Tetragona dorsalis ziegleri
          Length = 111

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +1

Query: 565 AGAITILLTDRNLNTSFFDPAGGGDPI 645
           AG IT+LL+DRN N  FF   GG  PI
Sbjct: 36  AGTITMLLSDRNFNKFFFILIGGEYPI 62


>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
           Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
           Haloarcula marismortui (Halobacterium marismortui)
          Length = 854

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 195 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVQNGAGTG*TVYPPLSS 359
           N LVPL +GA D+AFPR+N + +                      G T+Y PL++
Sbjct: 89  NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,961,965
Number of Sequences: 1657284
Number of extensions: 7956745
Number of successful extensions: 19718
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 18555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19650
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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