Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0041
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IGP7 Cluster: SD20656p; n=6; Drosophila melanogaster|...    35   2.1  
UniRef50_Q89KP2 Cluster: Bll4862 protein; n=4; Bradyrhizobiaceae...    33   4.9  
UniRef50_Q1DM46 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_O42656 Cluster: Uncharacterized protein C1851.04c; n=1;...    33   8.6  
UniRef50_P71513 Cluster: Dihydroneopterin aldolase; n=5; Alphapr...    33   8.6  

>UniRef50_Q0IGP7 Cluster: SD20656p; n=6; Drosophila
           melanogaster|Rep: SD20656p - Drosophila melanogaster
           (Fruit fly)
          Length = 708

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -1

Query: 552 RYHQGPHCGPLRRPVTKWLHHSTHGTLEYSLCDKKNHGVISFNGFYVASRDV 397
           R HQ P     RR VT+  HHS HG     L  K   G+ +  G      +V
Sbjct: 155 RRHQNPRHSHRRRHVTR-CHHSNHGRFSKRLAKKSRRGISAAKGAITVKEEV 205


>UniRef50_Q89KP2 Cluster: Bll4862 protein; n=4;
           Bradyrhizobiaceae|Rep: Bll4862 protein - Bradyrhizobium
           japonicum
          Length = 887

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -1

Query: 666 PRSKRVVSAFKIRQTQLT*AFRTRRLYLVSTLWCKCIRRYHQGPHCGPLRR 514
           P SKRV++    R+  +T   RT R       W   +RRY +GPH G  RR
Sbjct: 364 PMSKRVMAIVAARREAITWR-RTYRTDTPEAYW-SYLRRYPRGPHAGDARR 412


>UniRef50_Q1DM46 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 269

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = -1

Query: 609 AFRTRRLYLVSTLWCKCIRRYHQGPHCGPLRR 514
           AF +RRLYL +TL   C+RR  QGP   P+ R
Sbjct: 5   AFTSRRLYLKNTLCVHCLRRI-QGPDNRPISR 35


>UniRef50_O42656 Cluster: Uncharacterized protein C1851.04c; n=1;
           Schizosaccharomyces pombe|Rep: Uncharacterized protein
           C1851.04c - Schizosaccharomyces pombe (Fission yeast)
          Length = 1052

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 324 CRV*NCSSFVLISEQQGLIYWLYKVHLIKLIYYDRNLFDR 205
           CR+   S FV+++E + LIY +  + LI  I   +NLF+R
Sbjct: 21  CRIPKVSFFVVLTETEILIYQIRPLTLISKITKSQNLFER 60


>UniRef50_P71513 Cluster: Dihydroneopterin aldolase; n=5;
           Alphaproteobacteria|Rep: Dihydroneopterin aldolase -
           Methylobacterium extorquens (Protomonas extorquens)
          Length = 130

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = -2

Query: 647 SVRLKLDKPSSHKPFALDAFTLSLLFGANASVATTKAR 534
           ++ +++DKPS+  P  LD   + ++ G + SVATT+ R
Sbjct: 93  TIAVRIDKPSAPIPAVLDYAAIEIVRGRSDSVATTETR 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,931,953
Number of Sequences: 1657284
Number of extensions: 11498550
Number of successful extensions: 24470
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24466
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)