Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120006.Seq
(617 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 153 3e-36
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 150 3e-35
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 134 1e-30
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 129 6e-29
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 112 7e-24
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 83 7e-15
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 81 2e-14
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 81 2e-14
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 79 1e-13
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 78 1e-13
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 78 2e-13
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 77 3e-13
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 77 4e-13
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 77 4e-13
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 73 6e-12
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 71 2e-11
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 69 7e-11
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 69 1e-10
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 67 3e-10
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 60 4e-08
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 56 7e-07
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 51 3e-05
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 47 3e-04
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 46 7e-04
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 46 0.001
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 45 0.002
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 44 0.003
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 42 0.009
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 41 0.027
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 39 0.083
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 38 0.14
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 37 0.33
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.44
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 36 1.0
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 35 1.8
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 34 2.4
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 34 3.1
UniRef50_Q11UJ1 Cluster: Endoglucanase, glycoside hydrolase fami... 33 4.1
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 7.2
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 33 7.2
UniRef50_A0UYZ7 Cluster: FolC bifunctional protein; n=1; Clostri... 32 9.5
UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG122... 32 9.5
UniRef50_A4HFL7 Cluster: Putative uncharacterized protein; n=3; ... 32 9.5
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 32 9.5
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 153 bits (371), Expect = 3e-36
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +1
Query: 256 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 435
AKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR
Sbjct: 77 AKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 136
Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507
PGF++A ++R+TG +G HR++KE
Sbjct: 137 PGFSIADKKRRTGCIGAKHRISKE 160
Score = 132 bits (320), Expect = 5e-30
Identities = 64/79 (81%), Positives = 68/79 (86%)
Frame = +2
Query: 41 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 220
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 221 NEKIAVHCTVRELKQKKSL 277
NEKIAVHCTVR K ++ L
Sbjct: 65 NEKIAVHCTVRGAKAEEIL 83
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 150 bits (363), Expect = 3e-35
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = +1
Query: 256 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 435
AKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR
Sbjct: 131 AKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 190
Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507
GF++A ++R+TG +G HR++KE
Sbjct: 191 SGFSIADKKRRTGCIGAKHRISKE 214
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 158 TGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRELKQKKSL 277
+GQ PV SKARYTVRSFGIRRNEKIAVHCTVR K ++ L
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIL 137
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 134 bits (325), Expect = 1e-30
Identities = 62/83 (74%), Positives = 69/83 (83%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRP 438
KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G+DFYVV+ RP
Sbjct: 75 KAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRP 134
Query: 439 GFNVAHRRRKTGKVGFPHRLTKE 507
G V R+R G VG H+ TKE
Sbjct: 135 GARVTRRKRCKGTVGNSHKTTKE 157
Score = 110 bits (265), Expect = 2e-23
Identities = 58/80 (72%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = +2
Query: 50 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 229
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEK
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
Query: 230 IAVHCTVRELKQKKSL-RGV 286
IAVH TVR K ++ L RG+
Sbjct: 65 IAVHVTVRGPKAEEILERGL 84
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 129 bits (311), Expect = 6e-29
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRP 438
KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFYVVL RP
Sbjct: 77 KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERP 136
Query: 439 GFNVAHRRRKTGKVGFPHRLTKE 507
G+ VA RRR +VG HR+TK+
Sbjct: 137 GYRVARRRRCKTRVGIQHRVTKD 159
Score = 110 bits (265), Expect = 2e-23
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +2
Query: 38 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 217
SE N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIR
Sbjct: 3 SEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIR 62
Query: 218 RNEKIAVHCTVRELKQKKSL 277
RNEKIA + TVR K + L
Sbjct: 63 RNEKIACYVTVRGEKAMQLL 82
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 112 bits (269), Expect = 7e-24
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +2
Query: 41 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 220
++ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRR
Sbjct: 32 QETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRR 91
Query: 221 NEKIAVHCTVR 253
NEKI+V CT+R
Sbjct: 92 NEKISVFCTIR 102
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRP 438
+A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI+ + +
Sbjct: 105 QARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGLLCCVVKT 164
Query: 439 GFNVAHRRRKTGKVG 483
++ K K+G
Sbjct: 165 RIESCSKKIKKFKIG 179
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 82.6 bits (195), Expect = 7e-15
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGR 435
+A E L++ L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D + + R
Sbjct: 99 RAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIER 158
Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507
PG+ VA RRR K+ HR+TKE
Sbjct: 159 PGYRVARRRRARSKIPRRHRVTKE 182
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +2
Query: 77 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 253
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV T+R
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLR 96
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/76 (51%), Positives = 56/76 (73%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 232
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E I
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENI 83
Query: 233 AVHCTVRELKQKKSLR 280
AV T+R K L+
Sbjct: 84 AVMVTLRGEKALNFLK 99
Score = 68.9 bits (161), Expect = 9e-11
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGR 435
KA L+R L + ++ + GN FGI+EHI + G+KYDP +GI G+D + + R
Sbjct: 93 KALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDVAITIQR 152
Query: 436 PGFNVAHRRR-KTGKVGFPHRLTKE 507
PG + RRR + G + HR+T+E
Sbjct: 153 PGHRIVERRRQRRGHIPRRHRVTRE 177
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGR 435
KA + L+ L V+E L R + G F FGI EHIDL G+ YDP +GI+G+D V L R
Sbjct: 82 KALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVSLKR 140
Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507
G+ VA RRRK K+ HR+TKE
Sbjct: 141 RGYRVARRRRKKAKIATSHRVTKE 164
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/77 (40%), Positives = 51/77 (66%)
Frame = +2
Query: 50 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 229
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEA 71
Query: 230 IAVHCTVRELKQKKSLR 280
I + T+R K K L+
Sbjct: 72 IGIKVTLRGEKALKFLK 88
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGR 435
+A++ LE L + + L R F + GN FGI+EH D G+KYDP+IG++G+D VV+ R
Sbjct: 71 RAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGMDVTVVIKR 130
Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507
PG + RR T K+ HR+T E
Sbjct: 131 PGERICKRRIATRKIPTNHRVTLE 154
Score = 52.8 bits (121), Expect = 6e-06
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = +2
Query: 56 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 235
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 236 VHCTVRELKQKKSL 277
T+R + ++ L
Sbjct: 63 CKVTLRGQRAQQFL 76
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 78.2 bits (184), Expect = 1e-13
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 RAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVL 429
R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D V L
Sbjct: 96 RNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDVAVTL 154
Query: 430 GRPGFNVAHRRRKTGKVGFPHRLTKE 507
RPGF V +RRR VG HR+++E
Sbjct: 155 ARPGFRVQYRRRARADVGKDHRVSRE 180
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 62 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 241
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 242 CTVR 253
T+R
Sbjct: 92 VTLR 95
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVLGR 435
K + L+ VRE L NF +GN FGI ++ D KYDP IGIYG+D VVL R
Sbjct: 68 KVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVLER 127
Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507
PG V+ RRR+ KVG HR+ K+
Sbjct: 128 PGHRVSRRRRRGVKVGVEHRVGKD 151
Score = 50.0 bits (114), Expect = 4e-05
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +2
Query: 77 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRE 256
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I T+R+
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 257 LKQKKS 274
+ +S
Sbjct: 66 ADKVQS 71
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 235 CPLYSPRAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 411
C L KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 412 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEVL*SGSNRNMMVSYL 552
+ V +PG+ +A RR + KV HR++KE N V+Y+
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFNVNYV 168
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +2
Query: 56 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 235
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 236 VHCTVRELKQKKSLRGV*KSENMN 307
T+R K K++ V + N N
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKN 85
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 76.6 bits (180), Expect = 4e-13
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLG 432
KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+ YV L
Sbjct: 71 KAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEAYVTLE 129
Query: 433 RPGFNVAHRRRKTGKVGFPHRLTKE 507
RPG+ V RR K KVG HRL KE
Sbjct: 130 RPGYRVERRRIKRSKVGSRHRLNKE 154
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +2
Query: 62 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 241
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 242 CTVRELKQKKSLR 280
T+R K K L+
Sbjct: 65 VTLRGEKAYKILK 77
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 76.6 bits (180), Expect = 4e-13
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 259 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGR 435
+A+E L ++ E L R F + GN FGI+EH D G++YDP+IG++G+D VVL R
Sbjct: 71 RAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKR 130
Query: 436 PGFNVAHRRRKTGKVGFPHRLT 501
PG + RR T K+ HR+T
Sbjct: 131 PGERICKRRIATRKIPTDHRVT 152
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +2
Query: 56 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 235
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 236 VHCTVRELKQKKSL 277
T+R + ++ L
Sbjct: 63 CKVTLRGQRAQEFL 76
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRP 438
A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD + L RP
Sbjct: 72 AGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVCMTLSRP 131
Query: 439 GFNVAHRRRKTGKVGFPHRLT 501
G+ + R + +VG HR+T
Sbjct: 132 GYGIRKRSKHKARVGRSHRIT 152
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +2
Query: 62 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 241
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 242 CTVR 253
T+R
Sbjct: 65 VTIR 68
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 262 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRP 438
AEE L+ L + E L F TGNF FG++EH + +YDPSIGIYGLD V L RP
Sbjct: 81 AEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRP 138
Query: 439 GFNVAHRRRKTGKVGFPHRL 498
G+ VA R + + + HRL
Sbjct: 139 GYRVAKRDKASRSIPTKHRL 158
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +2
Query: 62 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 241
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 242 CTVRE 256
T+R+
Sbjct: 74 VTLRD 78
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 69.3 bits (162), Expect = 7e-11
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRP 438
A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI GL V L RP
Sbjct: 76 AKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGISVTLTRP 135
Query: 439 GFNVAHRRRKTGKVGFPHRLTKE 507
G+ + R + VG H +T +
Sbjct: 136 GYGIRTRSKHKASVGKSHIITSQ 158
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/68 (36%), Positives = 46/68 (67%)
Frame = +2
Query: 50 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 229
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEP 64
Query: 230 IAVHCTVR 253
I V T+R
Sbjct: 65 IGVAVTIR 72
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 44 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKG 62
Query: 224 EKIAVHCTVRE 256
I V T+R+
Sbjct: 63 LNIGVKVTLRK 73
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVL-GR 435
A L+ ++Y++ +F GN FGI ++ D G+KYDP IGI+G+D +V R
Sbjct: 76 ALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAIVFRRR 135
Query: 436 PGFNVAHRRRKTGKVGFPHRLTKE 507
G+ + RR K + R++KE
Sbjct: 136 GGYRIEKRRIKKMHIPKKMRISKE 159
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +1
Query: 259 KAEEILERGL---KVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 426
KAEE L+ K L +F GNF FG+ EHID G KYDPS+GIYG+D V
Sbjct: 78 KAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMDICVT 137
Query: 427 LGRPGFNVAHRRRKTGKVGFPHRLTKE 507
+ G+ V R+ K + H +TK+
Sbjct: 138 FEKSGYRVKSRKVKRSHIPEKHLVTKD 164
Score = 66.1 bits (154), Expect = 6e-10
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 232
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPI 68
Query: 233 AVHCTVRELKQKKSLR 280
+ T+R K ++ L+
Sbjct: 69 GLKVTLRGKKAEEFLK 84
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = -3
Query: 441 TWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFF 265
TW +V++ ++N++ +VLDTQ++VFL+TE ++T EV Q +F D QT +DFF
Sbjct: 44 TWSTHDNVEIHTVNTDTWVVLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFF 102
Score = 56.8 bits (131), Expect = 4e-07
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = -2
Query: 292 LSNPSQGFLLL*LSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTG 113
L Q F L ++ +DSNLF+++DT+ + SLG L+ +L Q+LG + Q VT
Sbjct: 94 LQTSFQDFFSLWTTNSNVDSNLFVSSDTESSDSVSSLGLNWSLTRQLFQNLGSSGQSVTR 153
Query: 112 FTNTDVQAKLSDMKIPHYI 56
FTN ++Q + D++ H +
Sbjct: 154 FTNRNIQDQFLDLQFTHRV 172
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 56.0 bits (129), Expect = 7e-07
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +1
Query: 274 LERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVA 453
L + LK++ + + NFS T FG GI +H++LG +D IGI+G++ L R G+ +
Sbjct: 72 LYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINIIGDLSRRGYRIK 131
Query: 454 HRRRKTGK 477
++ + K
Sbjct: 132 LKKEQDPK 139
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = -2
Query: 232 NLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHYIF 53
+LF+T + +R H + LG+ RLL+ +LLQHL + +T N +V+ +L + PH +
Sbjct: 144 DLFVTANAERAHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPHRVL 203
Query: 52 RII 44
R++
Sbjct: 204 RLV 206
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = -3
Query: 468 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 289
LTP+V V ++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F
Sbjct: 65 LTPAVDSVAR-ALQHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHL 123
Query: 288 QTPLKD 271
+ L++
Sbjct: 124 EPALQN 129
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 47.2 bits (107), Expect = 3e-04
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQG 82
Query: 224 EKIAVHCTVR 253
++I T+R
Sbjct: 83 QEIGCKVTLR 92
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 46.0 bits (104), Expect = 7e-04
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 41 EDNSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFG 211
E N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F
Sbjct: 23 EFNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFK 82
Query: 212 IRRNEKIAVHCTVR 253
IR+ I + T+R
Sbjct: 83 IRKGMPIGLKVTLR 96
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +2
Query: 56 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 226
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGW 83
Query: 227 KIAVHCTVR 253
I V T+R
Sbjct: 84 PIGVKVTLR 92
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 226
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGM 82
Query: 227 KIAVHCTVR 253
+ V T+R
Sbjct: 83 PVGVMVTLR 91
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/68 (35%), Positives = 42/68 (61%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 232
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ I
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYI 79
Query: 233 AVHCTVRE 256
A T+++
Sbjct: 80 ACKVTLQK 87
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 42.3 bits (95), Expect = 0.009
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = -3
Query: 468 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 289
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE QF D
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDA 122
Query: 288 QTPLKD 271
+ L D
Sbjct: 123 EAALDD 128
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 40.7 bits (91), Expect = 0.027
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +2
Query: 56 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 226
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGY 83
Query: 227 KIAVHCTVR 253
I T+R
Sbjct: 84 PIGCKVTLR 92
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 39.1 bits (87), Expect = 0.083
Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +2
Query: 8 VEER*KGEEGSEDNSKNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVF 178
++E+ + E + N + I+K+ + +CVG++ + K + +TGQ+P
Sbjct: 13 IKEKERQELQKKFGYSNNHQTPRIKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGL 72
Query: 179 SKARYTVRSFGIRRNEKIAVHCTVRELKQKKSLR 280
KA+ ++ +F +R+ IA T+R+ + + +R
Sbjct: 73 IKAKKSIAAFKLRKGMPIACKVTLRKKRAEDFIR 106
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 38.3 bits (85), Expect = 0.14
Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +2
Query: 56 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 226
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQ 138
Query: 227 KIAVHCTVR 253
+ + T+R
Sbjct: 139 PLGIAVTLR 147
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 37.1 bits (82), Expect = 0.33
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223
+N M + K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R
Sbjct: 32 RNPMLIPGLEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREG 91
Query: 224 EKIAVHCTVR 253
+ I H T+R
Sbjct: 92 QPIGCHVTLR 101
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.44
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 268 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 432
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 35.5 bits (78), Expect = 1.0
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223
KN+ + + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 224 EKIAVHCTVR 253
+ V T+R
Sbjct: 84 MPVGVMVTLR 93
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 34.7 bits (76), Expect = 1.8
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 223
KN+ + + K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N
Sbjct: 24 KNIHQIPKLVKITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIREN 83
Query: 224 EKIAVHCTVRELK 262
I + T+R K
Sbjct: 84 IAIGLVVTLRRDK 96
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 34.3 bits (75), Expect = 2.4
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 77 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 247
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 248 VR 253
+R
Sbjct: 91 LR 92
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +2
Query: 53 KNVMRNLHIRKLCLNIC----VGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 220
KN+M + + K+ N GE + + A LE +TGQ+P ++ A+ ++ +F +R+
Sbjct: 60 KNIMECVSLNKIVCNTSSKHYAGEK-ESILPAFTALEMITGQKPKYTCAKKSISTFKLRQ 118
Query: 221 NEKIAVHCTVR 253
N+ + ++R
Sbjct: 119 NQILGCKNSLR 129
>UniRef50_Q11UJ1 Cluster: Endoglucanase, glycoside hydrolase family
9 protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
Endoglucanase, glycoside hydrolase family 9 protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 854
Score = 33.5 bits (73), Expect = 4.1
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 175 YRLLSCELLQHLGGTSQPVTG-FTNTDVQAKLSDMKIPHYIFRI 47
+ + + ++ L G PVTG ++ TD+Q LSD+K Y+ R+
Sbjct: 796 FEITAKPIILDLNGREYPVTGDWSTTDIQLNLSDLKAGMYLIRL 839
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 33.1 bits (72), Expect = 5.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 304 ELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG--IYGLDFYVVLGRPGFNVAHRRRKTGK 477
E ++D + T + F +++ D+ +YD IG ++G+ G PG +AH R +
Sbjct: 236 EFKKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTV 295
Query: 478 VGF 486
GF
Sbjct: 296 KGF 298
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 7.2
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 265 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 387
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 32.7 bits (71), Expect = 7.2
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 289 KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRR 462
+++++ L F GN+ FGI+EHI + +D I GLD VV+ N H
Sbjct: 111 RIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVNFDRIDKIRGLDIVVVIS--ALNKDHSF 168
Query: 463 RKTGKVGFP 489
K+ FP
Sbjct: 169 ALLEKLNFP 177
>UniRef50_A0UYZ7 Cluster: FolC bifunctional protein; n=1;
Clostridium cellulolyticum H10|Rep: FolC bifunctional
protein - Clostridium cellulolyticum H10
Length = 424
Score = 32.3 bits (70), Expect = 9.5
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Frame = +1
Query: 241 LYSPRAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHI-DLGIKYDPSIGIYG--- 408
LY +AEE++ER K + ++ + +FS + GF + E I D + IG+ G
Sbjct: 197 LYPQEQEAEEVIERVSKEKNAQIHKVDFSTIYDKGFSLSEQIFDYKDYRNIKIGLLGDHQ 256
Query: 409 -------LDFYVVLGRPGFNVAHRRRKTG--KVGFPHRL 498
+D +L GF + HR G K +P RL
Sbjct: 257 MRNAAVAIDTCELLCNKGFALTHRNILDGLEKTRWPGRL 295
>UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG12266;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12266 - Caenorhabditis
briggsae
Length = 418
Score = 32.3 bits (70), Expect = 9.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 407 DWTFTSYLAGQVST*HTEGVRQEKWDFPTASQRK 508
DWTFT++ G V+ E ++EKWDF S +K
Sbjct: 383 DWTFTTHYKGTVNGLKVE--KREKWDFRKNSAKK 414
>UniRef50_A4HFL7 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 592
Score = 32.3 bits (70), Expect = 9.5
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = +2
Query: 80 RKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVREL 259
RK+ G++ T A KV E L +P+FS V GIR + + +R
Sbjct: 422 RKIGSVAAEGDANGETTDAGKVKEVLRSAEPIFSPLEQCVAVLGIRGRFSLELSRAIRAS 481
Query: 260 KQKKSLRGV*KSENMNCGVTTSPPRVILASVFKNTLT 370
+ R + + + G+ T + I+ASV LT
Sbjct: 482 TEDDGHR---LTTSTSIGLLTETVKNIIASVDTAQLT 515
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 32.3 bits (70), Expect = 9.5
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 289 KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 426
+V+++ + R+ F GN+ FG+QE + + YD + I+G++ VV
Sbjct: 109 RVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVSYDSVMQIHGMNITVV 156
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,407,203
Number of Sequences: 1657284
Number of extensions: 12198545
Number of successful extensions: 32432
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 31457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32414
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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