Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120004.Seq
(720 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 131 1e-29
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 95 2e-18
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 94 3e-18
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 89 8e-17
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 78 2e-13
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 65 2e-09
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 50 8e-05
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 1e-04
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 46 0.001
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 44 0.003
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 44 0.005
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 41 0.027
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 36 1.0
UniRef50_A6S1X1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A3M7C3 Cluster: Putative transcriptional regulator; n=1... 33 5.4
UniRef50_A7JYK0 Cluster: FAD/FMN-containing dehydrogenase; n=2; ... 33 7.1
UniRef50_A0D4D7 Cluster: Chromosome undetermined scaffold_37, wh... 33 9.4
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 131 bits (317), Expect = 1e-29
Identities = 86/219 (39%), Positives = 117/219 (53%), Gaps = 7/219 (3%)
Frame = +1
Query: 85 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRLKCQ 264
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL R K
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 265 KWFCPFSTKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*---S 435
K P + K R++ L KE + + R TV P
Sbjct: 60 KMVLPIYDEDDNQYK-RTIARHLVGHKERG----VKRILVPTRANYMTVFNLPGMMLAEQ 114
Query: 436 FI*YITTKRRLT---LYATI*NIPKFHSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRD 606
I ++ RL + A++ N F T V+ SVY+ TR+IL T+P +CSRV+ D
Sbjct: 115 LIFHLIYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVAND 174
Query: 607 ELRFFDVTNA-RTHRGGVGDQLFNNYSGFLQNLIRRAVA 720
++RFFD ++ G GD +FNN GFL+NLIRRAVA
Sbjct: 175 DVRFFDANVVDNNYQAGNGDTVFNNMPGFLRNLIRRAVA 213
Score = 128 bits (309), Expect = 1e-28
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
FKMSKMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQL
Sbjct: 56 FKMSKMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQL 115
Query: 432 IFHLIYNNEEAVNVICDNLKYTE 500
IFHLIY+N VN IC +LK E
Sbjct: 116 IFHLIYDNRLEVNRICASLKNNE 138
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 95.1 bits (226), Expect = 2e-18
Identities = 74/218 (33%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Frame = +1
Query: 85 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRLKCQ 264
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL R K +
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 265 KWFCPF--STKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKR-----CLI*TV*CKP 423
K P + T +N R+L L K + E + TKR I +
Sbjct: 60 KMVLPIPDADGTALN---RTLARSLVNHKAIGDE---RILVPTKRNYMSVLNILALQLAE 113
Query: 424 NN*SFI*YITTKRRLTLYATI*NIPKFHSGTQRVIHSVYATTRSILDTTNPNTFCSRVSR 603
I Y R + + +F + T +V+ ++ A T +I+ PN +CSR
Sbjct: 114 QYIFHIIYENDVERERICQMLEISERFENDTYKVVDTINARTSAIMAMVTPNRYCSRPLY 173
Query: 604 DELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAV 717
+ R + VT+ VG Q+FN FLQNLI +AV
Sbjct: 174 TDDRIWSVTD----ENNVGGQVFNEMPPFLQNLISKAV 207
Score = 79.4 bits (187), Expect = 8e-14
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
FKM KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ
Sbjct: 56 FKMEKMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQY 115
Query: 432 IFHLIYNNEEAVNVICDNLKYTE 500
IFH+IY N+ IC L+ +E
Sbjct: 116 IFHIIYENDVERERICQMLEISE 138
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 94.3 bits (224), Expect = 3e-18
Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Frame = +1
Query: 85 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRLKCQ 264
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL R + +
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 265 KWFCPF-STKTTINSK*RSLGI*LEIKKEVSSEF*FQAQPITKRCLI*TV*CKPNN*SF- 438
K P + TI + RS+G L I S+ + + L P F
Sbjct: 59 KMVLPIPDAEGTIYN--RSVGKSL-ISGTESNRVLIPTKTNYEDVLKLPSMSLPEQLIFH 115
Query: 439 I*YITTKRRLTLYATI*NIPKFHSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 618
+ Y ++ + + FHS +V+ VY T +L TNP FC+RV+ + R
Sbjct: 116 MIYDEPDKQNEICKLLQYNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVNINNFRS 175
Query: 619 FDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVA 720
+ + + + +N GFL+NLI ++VA
Sbjct: 176 YGTAD----ETDIANVTYNAMPGFLKNLINKSVA 205
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/98 (38%), Positives = 56/98 (57%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
F+M KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQL
Sbjct: 55 FRMEKMVLPIPDAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQL 112
Query: 432 IFHLIYNNEEAVNVICDNLKYTEVSQRHATRYTQRLRN 545
IFH+IY+ + N IC L+Y E + +R+ N
Sbjct: 113 IFHMIYDEPDKQNEICKLLQYNENFHSDLYKVVERVYN 150
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 89.4 bits (212), Expect = 8e-17
Identities = 43/98 (43%), Positives = 60/98 (61%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
FK+ KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL
Sbjct: 56 FKIEKMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQL 115
Query: 432 IFHLIYNNEEAVNVICDNLKYTEVSQRHATRYTQRLRN 545
+ H+IY+N EA +C L++ E Q R + + N
Sbjct: 116 VTHMIYDNVEAQGAVCKALQHNENFQTETYRLAEDMFN 153
Score = 78.2 bits (184), Expect = 2e-13
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Frame = +1
Query: 85 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRLKCQ 264
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H R K +
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 265 KWFCPFSTKTTINSK*RSLGI*LEIKKEV-SSEF*FQAQPITKRCL-I*TV*CKPNN*SF 438
K P N R++G L K + ++ + K L + ++ +
Sbjct: 60 KMVLPIPDAEG-NIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTH 118
Query: 439 I*YITTKRRLTLYATI*NIPKFHSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRF 618
+ Y + + + + + F + T R+ ++ T +IL TNP +CS+V+ + R
Sbjct: 119 MIYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQVNSNYARI 178
Query: 619 FDVTNARTHRGGVGDQLFNNYSGFLQNLIRRAVA 720
+ + V +F + FL+NLI AVA
Sbjct: 179 WTTDDV-----NVAGNVFESMPPFLKNLINVAVA 207
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
FKM KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE L
Sbjct: 56 FKMEKMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEAL 115
Query: 432 IFHLIYNNEEAVNVICDNLKYTE 500
I H+IY N E IC+ LK+TE
Sbjct: 116 IIHMIYENLEKQKEICERLKFTE 138
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/61 (45%), Positives = 36/61 (59%)
Frame = +1
Query: 85 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRLKCQ 264
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H K +
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 265 K 267
K
Sbjct: 60 K 60
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 526 IHSVYATTRSILDTTNPNTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNLI 705
+ +Y+ T S+L+ NP+ FC+ VS LR F + D F + F++NL+
Sbjct: 147 VQKLYSNTMSVLNMANPDHFCAEVSLTSLRQF---SNEIGNEPAQDTNFELFPKFIKNLV 203
Query: 706 RRAVA 720
+AVA
Sbjct: 204 TKAVA 208
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
FK+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L
Sbjct: 58 FKIEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERL 117
Query: 432 IFHLIYNNEEAVNVICDNLKYTE 500
+ HLIYNN A IC+ L+ E
Sbjct: 118 VLHLIYNNRTAAAEICNQLRQQE 140
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRLK 258
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + K
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 259 CQK 267
+K
Sbjct: 60 IEK 62
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 49.6 bits (113), Expect = 8e-05
Identities = 27/90 (30%), Positives = 45/90 (50%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
FKM KMV+ I +F M I + L+ +RI+IP +N+ + +M E+
Sbjct: 54 FKMEKMVVRIGSGVGPEFDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKF 113
Query: 432 IFHLIYNNEEAVNVICDNLKYTEVSQRHAT 521
+F+ IY ++ + +C L VSQ + T
Sbjct: 114 VFYSIYERQDLIAELCRGL----VSQEYYT 139
Score = 40.3 bits (90), Expect = 0.047
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 130 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRLKCQK 267
N CIF + F C Y+ PC Y+DDG FIC HL K K +K
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEK 58
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +3
Query: 357 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 491
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Frame = +1
Query: 100 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRLKC 261
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K K
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 262 QK 267
K
Sbjct: 63 LK 64
Score = 36.7 bits (81), Expect = 0.58
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 428
FK+ K I DN+ FKM + + L+ + + + +++ +S E+
Sbjct: 60 FKILKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVER 119
Query: 429 LIFHLIYNNEEAVNVICDNLKYTEVSQRHA 518
+I + IYN++E + +CD L E ++ A
Sbjct: 120 MIIYTIYNDKEKIKDLCDILMKQEFFEQPA 149
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = -1
Query: 66 MDHGNFMIEKEISYSINFSQDL 1
MD+G+F+IEKEISYSINFSQDL
Sbjct: 1 MDYGDFVIEKEISYSINFSQDL 22
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 431
F + KM L I FK+ I + LV ++ + I+IPS NY + +N+M AE+
Sbjct: 54 FPLEKMTLEIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKF 111
Query: 432 IFHLIYNNEEA-----VNVICDNLK 491
I + IY + +C++L+
Sbjct: 112 IMYSIYGESATEPTGLITQLCESLR 136
Score = 40.7 bits (91), Expect = 0.035
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +1
Query: 106 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHL 243
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHL 50
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 130 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRLKCQK 267
N CIF + F C Y PCS D + DG F+C+ HL + K +K
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKK 63
Score = 38.3 bits (85), Expect = 0.19
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 252 FKMSKMVLPIFDEDDN-QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQ 428
FK+ K V I +N FK + L+ RI IP+ NY N+ +M E+
Sbjct: 59 FKLKKEVFEIPSGVNNTSFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEK 118
Query: 429 LIFHLIYNNEEAV 467
+F+ IY+ + V
Sbjct: 119 YVFYSIYDEPDTV 131
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 130 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRLKCQK 267
N CIF + FD C Y CS DA + DG FICN HL K + K
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILK 60
>UniRef50_A6S1X1 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 978
Score = 33.9 bits (74), Expect = 4.1
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +1
Query: 445 YITTKRRLTLYATI*NIPKFHSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDELRFFD 624
YI + L ++AT + S +RVI + AT R + T P+T R + F +
Sbjct: 316 YIKQENTLIIFATSMTVDPVLSRAKRVIEDLNATGRCVGVLTKPDTLSDRTGNTD--FEN 373
Query: 625 VTNARTHRGGVG 660
+ + + HR G G
Sbjct: 374 ILSGKEHRLGHG 385
>UniRef50_A3M7C3 Cluster: Putative transcriptional regulator; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
transcriptional regulator - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 266
Score = 33.5 bits (73), Expect = 5.4
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +3
Query: 279 IFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNE 458
+FDE + FKM + ER ++R L +Q + + A++L+ H +E
Sbjct: 170 LFDEVEGFFKMKDVAEKLHLTERTLQRQLAKEGVTFQILLDQVRERHAKKLLNH----HE 225
Query: 459 EAVNVICDNLKYTEVSQRHATRYTQRLRN 545
+++ I + L Y+EV+ H TR +R N
Sbjct: 226 YSISYISEKLGYSEVT--HFTRAFKRWTN 252
>UniRef50_A7JYK0 Cluster: FAD/FMN-containing dehydrogenase; n=2;
Vibrio|Rep: FAD/FMN-containing dehydrogenase - Vibrio
sp. Ex25
Length = 563
Score = 33.1 bits (72), Expect = 7.1
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 354 KRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEVSQRHATRYTQ 533
+R+L P V LN Q E LIF+ Y ++ V V+C++ + + + ATR++
Sbjct: 54 ERLLTPLENTVSPVPGLNQY-QVESLIFNTRYQHQPFVIVMCESTQEVQQAYLTATRFSL 112
Query: 534 RLR 542
+R
Sbjct: 113 PIR 115
>UniRef50_A0D4D7 Cluster: Chromosome undetermined scaffold_37, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_37,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 360
Score = 32.7 bits (71), Expect = 9.4
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Frame = +3
Query: 213 RRMVYLQQPPHQTFKMSKMVLPIFDEDDNQF---KMTI---ARHLVGNKE--RGIKRILI 368
+RM LQQ HQ+ K + +L +F++ N+F K I LV E R L+
Sbjct: 122 QRMKILQQECHQSDKKKQEILTLFNDLQNEFDKYKQEIILNINELVNQSEEIRETSLTLV 181
Query: 369 PSATNYQEVFNL-------NSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEVSQRHATRY 527
+T+ + L + Q L HLI N+ +I + T + ++ A +
Sbjct: 182 DQSTDCEAKIKLLLLQLLKSCSPQLHSLKQHLITLNQTIYELIQQQQEQTNLIEQQAKEH 241
Query: 528 TQRL---RNYKKHSRHHKPEH 581
QRL +K R K +H
Sbjct: 242 KQRLLEIEEERKMEREQKIQH 262
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,949,531
Number of Sequences: 1657284
Number of extensions: 13248240
Number of successful extensions: 32332
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 31220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32314
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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