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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0029
         (590 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr...   199   5e-50
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc...   181   1e-44
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt...   177   1e-43
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr...   176   4e-43
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C...   175   8e-43
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch...   169   4e-41
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi...   165   9e-40
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R...   161   1e-38
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto...   156   4e-37
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group...   154   1e-36
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr...   152   7e-36
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt...   148   1e-34
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt...   147   1e-34
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch...   144   1e-33
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re...   144   2e-33
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep...   144   2e-33
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:...   141   1e-32
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria...   136   3e-31
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs...   136   5e-31
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr...   136   5e-31
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt...   132   6e-30
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b...   130   2e-29
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta...   129   4e-29
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa...   124   1e-27
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ...   122   5e-27
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae...   122   6e-27
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto...   121   1e-26
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ...   121   1e-26
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C...   118   8e-26
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6...   118   1e-25
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep...   117   2e-25
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina...   116   3e-25
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt...   114   1e-24
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms...   112   7e-24
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt...   111   9e-24
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:...   110   2e-23
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto...   108   1e-22
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy...   107   1e-22
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira...   107   2e-22
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt...   105   8e-22
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C...   104   1e-21
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto...   101   1e-20
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI...   100   2e-20
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo...   100   3e-20
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ...   100   3e-20
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ...    99   9e-20
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the...    99   9e-20
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch...    98   2e-19
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum...    95   8e-19
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ...    94   3e-18
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ...    93   3e-18
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula...    93   4e-18
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa...    93   4e-18
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ...    92   1e-17
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C...    89   9e-17
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto...    88   2e-16
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|...    84   2e-15
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace...    84   2e-15
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A...    84   3e-15
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re...    82   8e-15
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism...    80   3e-14
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy...    77   4e-13
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep...    75   2e-12
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R...    72   1e-11
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran...    71   3e-11
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ...    70   4e-11
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|...    70   4e-11
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene...    69   6e-11
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re...    68   1e-10
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|...    65   1e-09
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho...    64   2e-09
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac...    63   4e-09
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica...    61   2e-08
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;...    60   4e-08
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;...    60   5e-08
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc...    59   9e-08
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc...    58   1e-07
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr...    58   2e-07
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo...    58   2e-07
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc...    58   2e-07
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ...    57   4e-07
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis...    57   4e-07
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly...    56   5e-07
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:...    56   8e-07
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1...    55   1e-06
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6...    54   2e-06
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu...    54   2e-06
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:...    54   2e-06
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ...    53   4e-06
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep...    53   6e-06
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1...    52   8e-06
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1...    51   2e-05
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ...    51   2e-05
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli...    50   4e-05
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re...    50   4e-05
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4...    50   5e-05
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples...    48   2e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ...    47   3e-04
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep...    46   5e-04
UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1; Plan...    45   0.001
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor...    45   0.002
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1....    44   0.002
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:...    44   0.002
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch...    44   0.004
UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep: C...    42   0.011
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti...    42   0.011
UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter violace...    42   0.014
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re...    41   0.025
UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7; Desulfuromonadale...    41   0.025
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su...    39   0.076
UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep: Cy...    39   0.076
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re...    39   0.10 
UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep: C...    39   0.10 
UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla crist...    38   0.18 
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1....    38   0.23 
UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep: Cyt...    36   0.94 
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul...    34   2.2  
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla...    34   2.9  
UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus tetradac...    34   2.9  
UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3; ...    34   2.9  
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|...    33   3.8  
UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep...    33   5.0  
UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;...    33   6.6  
UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1...    33   6.6  
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar...    33   6.6  
UniRef50_Q7M2C0 Cluster: Ubiquinol-cytochrome-c reductase (EC 1....    32   8.7  

>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
           b - Drosophila melanogaster (Fruit fly)
          Length = 378

 Score =  199 bits (485), Expect = 5e-50
 Identities = 100/170 (58%), Positives = 114/170 (67%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCLIIQI+TGLFL ++YTA+I +AFY VN+ICR+VNYG ++RTLHANGASFFFICIYLH+
Sbjct: 40  LCLIIQILTGLFLAMHYTADINLAFYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHV 99

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRGIYY S+      L                YVLP GQ+SFW ATVITNLL AIPYLG 
Sbjct: 100 GRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPWGQMSFWVATVITNLLYAIPYLGM 159

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            LV  + GGFAVDNATLTRF+T                     QTGSNNP
Sbjct: 160 DLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGSNNP 209


>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
           Cytochrome b - Clarias liocephalus
          Length = 373

 Score =  181 bits (441), Expect = 1e-44
 Identities = 88/141 (62%), Positives = 103/141 (73%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCL +QI+TGLFL ++YT++I  AF  V +ICR+VNYG IIR LHANGASFFFICIYLHI
Sbjct: 35  LCLAVQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWIIRNLHANGASFFFICIYLHI 94

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRG+YY S+  K                    YVLP GQ+SFWGATVITNLLSA+PY+G 
Sbjct: 95  GRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGN 154

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
            LV  I GGF+VDNATLTRF+
Sbjct: 155 ALVQWIWGGFSVDNATLTRFF 175



 Score =  181 bits (441), Expect = 1e-44
 Identities = 88/141 (62%), Positives = 103/141 (73%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCL +QI+TGLFL ++YT++I  AF  V +ICR+VNYG IIR LHANGASFFFICIYLHI
Sbjct: 222 LCLAVQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWIIRNLHANGASFFFICIYLHI 281

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRG+YY S+  K                    YVLP GQ+SFWGATVITNLLSA+PY+G 
Sbjct: 282 GRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGN 341

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
            LV  I GGF+VDNATLTRF+
Sbjct: 342 ALVQWIWGGFSVDNATLTRFF 362


>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
           Cytochrome b - Capra sibirica (Siberian ibex)
          Length = 380

 Score =  177 bits (432), Expect = 1e-43
 Identities = 88/170 (51%), Positives = 108/170 (63%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +CLI+QI+TGLFL ++YT++   AF  V +ICR+VNYG IIR +HANGAS FFIC+++HI
Sbjct: 39  ICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHI 98

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRG+YY S+                       YVLP GQ+SFWGATVITNLLSAIPY+GT
Sbjct: 99  GRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGT 158

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            LV  I GGF+VD ATLTRF+                      +TGSNNP
Sbjct: 159 SLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGSNNP 208


>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
           b - Cryptotis parva (Least shrew)
          Length = 379

 Score =  176 bits (428), Expect = 4e-43
 Identities = 88/170 (51%), Positives = 108/170 (63%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +CLIIQI+TGLFL ++YT++   AF  V +ICR+VNYG +IR LHANGAS FFIC++LH+
Sbjct: 39  ICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHV 98

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRG+YY S+                       YVLP GQ+SFWGATVITNLLSAIPY+G+
Sbjct: 99  GRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGS 158

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            LV  I GGF+VD ATLTRF+                      +TGSNNP
Sbjct: 159 DLVQWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGSNNP 208


>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
           Cytochrome b - Leuciscus carolitertii
          Length = 345

 Score =  175 bits (425), Expect = 8e-43
 Identities = 84/141 (59%), Positives = 102/141 (72%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCLI QI+TGLFL ++YT++I  AF  V +ICR+VNYG +IR+LHANGASFFFIC+Y+HI
Sbjct: 39  LCLITQILTGLFLAMHYTSDISTAFSSVTHICRDVNYGWLIRSLHANGASFFFICLYMHI 98

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            RG+YY S+  K                    YVLP GQ+SFWGATVITNLLSA+PY+G 
Sbjct: 99  ARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGD 158

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
            LV  I GGF+VD ATLTRF+
Sbjct: 159 TLVQWIWGGFSVDXATLTRFF 179


>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
           Cytochrome b - Homo sapiens (Human)
          Length = 380

 Score =  169 bits (411), Expect = 4e-41
 Identities = 87/169 (51%), Positives = 105/169 (62%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           CLI+QI TGLFL ++Y+ +   AF  + +I R+VNYG IIR LHANGAS FFIC++LHIG
Sbjct: 40  CLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHIG 99

Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           RG+YY SF                       YVLP GQ+SFWGATVITNLLSAIPY+GT 
Sbjct: 100 RGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTD 159

Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           LV  I GG++VD+ TLTRF+T                     +TGSNNP
Sbjct: 160 LVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGSNNP 208


>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
           geronimensis|Rep: Cytochrome b - Anniella geronimensis
          Length = 262

 Score =  165 bits (400), Expect = 9e-40
 Identities = 79/137 (57%), Positives = 95/137 (69%)
 Frame = +3

Query: 96  QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 275
           QIITG+FL ++YT +I +AF  V +ICR+V YG ++R LH NGAS FF CIYLHIGRG+Y
Sbjct: 1   QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFCIYLHIGRGLY 60

Query: 276 YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN* 455
           Y S  LK                    YVLP GQ+SFWGATVITNL SA+PY+G  LV+ 
Sbjct: 61  YGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITNLSSALPYIGPTLVHW 120

Query: 456 I*GGFAVDNATLTRFYT 506
             GGFA+DNATLTRF+T
Sbjct: 121 TWGGFAIDNATLTRFFT 137


>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
           Cytochrome b protein - Ornithodoros porcinus
          Length = 365

 Score =  161 bits (390), Expect = 1e-38
 Identities = 81/169 (47%), Positives = 106/169 (62%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           CL IQI TG+FL ++++++I +AF  +++I R+VN G +IR  HAN ASFFFI +Y+HI 
Sbjct: 37  CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFFFIFLYIHIA 96

Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           RG+Y+ SF LK   +                YVLP GQ+SFWGATVITNLLSAIPY+GT 
Sbjct: 97  RGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGTS 156

Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           +   I GGF+VDN TLTRF+T                     +TGS+NP
Sbjct: 157 ITQWIWGGFSVDNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGSSNP 205


>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
           Cytochrome b - Venerupis (Ruditapes) philippinarum
          Length = 440

 Score =  156 bits (378), Expect = 4e-37
 Identities = 77/170 (45%), Positives = 101/170 (59%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +CL+ QIITGL + ++YT  + +AF  V +I R+VN G  +R LHANGAS FF+ IYLHI
Sbjct: 50  MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRG+YY SF++K   L                YVLP GQ+SFWGATVITNL  A+PY+G+
Sbjct: 110 GRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNLFGAVPYVGS 169

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            L+  + GG  V +ATL RF+                      +TGS+NP
Sbjct: 170 TLMEWVWGGHCVGDATLKRFFVLHFVSPFIIAALVALHLFFLHETGSSNP 219


>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
           group|Rep: Cytochrome b - Lottia digitalis (California
           fingered limpet)
          Length = 389

 Score =  154 bits (374), Expect = 1e-36
 Identities = 79/170 (46%), Positives = 104/170 (61%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCLI+Q+I+GLFL+ +Y+A+   AF  V +I RNVN+G ++R++HANGAS FF C+Y HI
Sbjct: 43  LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFFCMYAHI 102

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRG+YY  +  + V L                YVLP GQ+SFWGATVITNLL+AIP +G+
Sbjct: 103 GRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNLLTAIPMVGS 162

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            LV  + GGF+V   TLTRFY+                       GS+NP
Sbjct: 163 PLVKWVWGGFSVSGVTLTRFYSLHFILPFVLSMLVLGHVILLHDKGSSNP 212


>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
           b - Arabidopsis thaliana (Mouse-ear cress)
          Length = 393

 Score =  152 bits (368), Expect = 7e-36
 Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +CL+IQI+TG+FL ++YT ++++AF  V +I R+V  G ++R +HANGAS FFI +YLHI
Sbjct: 44  ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG+YY S++   ++V                  YVLP GQ+SFWGATVIT+L SAIP +
Sbjct: 104 FRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVV 163

Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           G  +V  + GGF+VDNATL RF++                     Q GSNNP
Sbjct: 164 GDTIVTWLWGGFSVDNATLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNP 215


>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
           Cytochrome b - Micrurus fulvius microgalbineus (Mexican
           coral snake)
          Length = 371

 Score =  148 bits (358), Expect = 1e-34
 Identities = 77/169 (45%), Positives = 98/169 (57%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           CL++Q++TG FL I+YTANI +AF  V +I R+V  G I++  HA GAS FFICIY+HI 
Sbjct: 32  CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91

Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           RG+YY  +  K V L                YVLP GQ+SFW ATVITNLL+AIPYLG  
Sbjct: 92  RGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGVA 151

Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           +   + GGF++++ TLTRF                         GSNNP
Sbjct: 152 VTTWLWGGFSINDPTLTRFCALHFILPFIIISLSSIHIILLHNEGSNNP 200


>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
           Cytochrome b - Spizellomyces punctatus
          Length = 396

 Score =  147 bits (357), Expect = 1e-34
 Identities = 81/170 (47%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
           L+I II+GL L ++YT N  +AF  V +I R+VN G ++R +HANGASFFFI +YLHIGR
Sbjct: 40  LVILIISGLTLAMHYTPNTLLAFSSVEHIMRDVNNGWLLRYIHANGASFFFIWVYLHIGR 99

Query: 267 GIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            +YY S+      L                  YVLP GQ+SFWGATVITNLLSAIP++GT
Sbjct: 100 NLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVITNLLSAIPWIGT 159

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
             V  + GGF+VDNATL RF++                     Q GSNNP
Sbjct: 160 DFVLFVWGGFSVDNATLNRFFSLHYLLPFILAALVVMHLLALHQDGSNNP 209


>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
           Cytochrome b - Mytilus edulis (Blue mussel)
          Length = 397

 Score =  144 bits (349), Expect = 1e-33
 Identities = 74/170 (43%), Positives = 99/170 (58%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCL+IQ+++GL L+ +YTA+ ++AF  V +I RNV  G ++R +HANG+S FFICIY HI
Sbjct: 54  LCLVIQLLSGLLLSAHYTAHEDMAFDSVVHIMRNVEKGWMLRNIHANGSSMFFICIYAHI 113

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            RG+YY S+  K V                  Y LP GQ+S+WGATVITN+LS  P +G 
Sbjct: 114 ARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMSYWGATVITNMLSVSPVVGE 173

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            ++  + GG+ V NATL RFYT                     + GSNNP
Sbjct: 174 SMLRYVWGGWTVCNATLKRFYTLHFLLPFVMVAVVFLHLFFLHEKGSNNP 223


>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
           Apocytochrome b - Iphiteon panicea
          Length = 397

 Score =  144 bits (348), Expect = 2e-33
 Identities = 70/142 (49%), Positives = 90/142 (63%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCLIIQ+ITG+ L ++Y   I  +F  + +  RNV++G I R LHANGAS FF+C+YLHI
Sbjct: 46  LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            R IY+ ++  K                    YVLP GQ+SFW ATVITNL SAIPY+G 
Sbjct: 106 SRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSFWAATVITNLFSAIPYIGN 165

Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
            +V  I G F++ NATL RFY+
Sbjct: 166 TIVLWIWGSFSISNATLNRFYS 187


>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
           Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
           sphaeroides)
          Length = 445

 Score =  144 bits (348), Expect = 2e-33
 Identities = 75/173 (43%), Positives = 100/173 (57%), Gaps = 2/173 (1%)
 Frame = +3

Query: 78  ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           A CL++QI+TG+ L ++YT ++++AF  V +I RNVN G ++R LHANGAS FFI +YLH
Sbjct: 52  AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111

Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
           I RG+YY S+    +   +                YVLP GQ+SFWGATVIT L  AIP 
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPG 171

Query: 432 LGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           +G  +   + GG AVDNATL RF++                      TG+NNP
Sbjct: 172 IGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNP 224


>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
           Cytochrome b - Lingula unguis
          Length = 418

 Score =  141 bits (342), Expect = 1e-32
 Identities = 74/170 (43%), Positives = 97/170 (57%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L L+ QII+G FL+ +Y A+++ AF  + +I R+VNYG +IR  H NGAS FF  +Y+HI
Sbjct: 37  LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFFFMYIHI 96

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRGIYY  +    V                  YVLP GQ+S+W + VIT+LLS IPY+G 
Sbjct: 97  GRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASVVITSLLSTIPYIGP 156

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            LV  I GGF+V  ATLTRFY+                     +TGS+NP
Sbjct: 157 SLVEWIWGGFSVGQATLTRFYSLHFILPFVMVIVVIIHVGLLHETGSSNP 206


>UniRef50_P05418 Cluster: Cytochrome b; n=11;
           Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
           denitrificans
          Length = 440

 Score =  136 bits (330), Expect = 3e-31
 Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
 Frame = +3

Query: 78  ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           A CL++QI TG+ L ++YT ++++AF  V +I R+VN G ++R LHANGAS FF+ +Y+H
Sbjct: 52  AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111

Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
           I RG+YY S+    +   +                YVLP GQ+SFWGATVIT L  AIP 
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPG 171

Query: 432 LGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           +G  +   + GG AVDN TL RF++                      TG+NNP
Sbjct: 172 VGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVVVHIWAFHTTGNNNP 224


>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
           (RNA maturase SCbI4) [Contains: Truncated, nonfunctional
           cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
           Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
           precursor (RNA maturase SCbI4) [Contains: Truncated,
           nonfunctional cytochrome b; RNA maturase bI4 (EC
           3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
          Length = 638

 Score =  136 bits (328), Expect = 5e-31
 Identities = 66/143 (46%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCL+IQI+TG+F+ ++Y++NIE+AF  V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38  LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97

Query: 261 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            +G+YY S+    V L                  Y    GQ+S WGATVITNL SAIP++
Sbjct: 98  AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157

Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
           G  +V+ + GGF+V N T+ RF+
Sbjct: 158 GNDIVSWLWGGFSVSNPTIQRFF 180


>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
           b - Rhodospirillum rubrum
          Length = 405

 Score =  136 bits (328), Expect = 5e-31
 Identities = 69/144 (47%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + +II I TG+FL + YTA+++ AF  V  I R+VNYG ++R +HANGAS FFI +Y+H+
Sbjct: 50  IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMFFIVVYVHM 109

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG+YY S+    + +                  YVLP GQ+SFWGATVITNL SAIP +
Sbjct: 110 FRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVV 169

Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
           G  +V  + GGF+VDN TL RF++
Sbjct: 170 GDDIVTLLWGGFSVDNPTLNRFFS 193


>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
           Cytochrome b - Hemirhagerrhis hildebrandtii
          Length = 366

 Score =  132 bits (319), Expect = 6e-30
 Identities = 66/128 (51%), Positives = 83/128 (64%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           CL +Q+ TG FL I+YTA++ +AF  V +I R+V YG +++  HA GAS FFICIY HI 
Sbjct: 32  CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLFFICIYTHIA 91

Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           RG+YY S+  K V L                YVLP GQ+SFW ATVITNLL+AIPYLGT 
Sbjct: 92  RGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTT 151

Query: 444 LVN*I*GG 467
           +   + GG
Sbjct: 152 MTXWLWGG 159


>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
           Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
           [Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
           japonicum
          Length = 687

 Score =  130 bits (314), Expect = 2e-29
 Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 2/168 (1%)
 Frame = +3

Query: 93  IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
           +QI+TG+ L ++YT + ++AF  V  I R+VNYG ++R +HA GAS FF  +Y+H+ RG+
Sbjct: 56  MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFAVYVHMLRGL 115

Query: 273 YYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
           YY S+    + + +                YVLP GQ+SFWGATVITNL SAIPY G  +
Sbjct: 116 YYGSYKEPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYFGESI 175

Query: 447 VN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           V  + GG++V N TL RF++                       G NNP
Sbjct: 176 VTLLWGGYSVGNPTLNRFFSLHYLLPFLIAGVVVLHVWALHVAGQNNP 223


>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
           compar|Rep: Cytochrome b - Campanulotes bidentatus
           compar (small pigeon louse)
          Length = 374

 Score =  129 bits (312), Expect = 4e-29
 Identities = 66/142 (46%), Positives = 89/142 (62%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +CL+IQ+++G+FL+ +Y+  IE AF  V  I  +V +G + R++HANGASFFF  +YLHI
Sbjct: 44  VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFFWVYLHI 103

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
           GRG+Y   + L  V +                YV P GQI   GATVIT+LLSAIPY+G 
Sbjct: 104 GRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITSLLSAIPYMGG 163

Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
            LV  + GGF V   TL RF++
Sbjct: 164 FLVKWVWGGFFVKGPTLHRFFS 185


>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
           Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
           bI3 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 517

 Score =  124 bits (300), Expect = 1e-27
 Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCL+IQI+TG+F+ ++Y++NIE+AF  V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38  LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97

Query: 261 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            +G+YY S+    V L                  Y    GQ+S WGATVITNL SAIP++
Sbjct: 98  AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157

Query: 435 GTILVN*I*GGFAVDN 482
           G  +V+ + GGF +++
Sbjct: 158 GNDIVSWLWGGFNMED 173


>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
           Apocytochrome b - Polytomella parva
          Length = 370

 Score =  122 bits (295), Expect = 5e-27
 Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L L  QI+TG+ L ++Y  +  +AFY V ++  +V YG +IR  H NGAS FF+ ++LH+
Sbjct: 38  LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            R +YY S +   + + +                YVLP GQ+SFWGATVIT+L+SA+P +
Sbjct: 98  FRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVITSLVSAVPIV 157

Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
           GT LV  + GGF+V N TL RF++
Sbjct: 158 GTDLVYYLWGGFSVSNPTLNRFFS 181


>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
           Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
           magellanicus (Sea scallop)
          Length = 395

 Score =  122 bits (294), Expect = 6e-27
 Identities = 63/169 (37%), Positives = 93/169 (55%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           CL+ QI+TG FL+ YYTA+ ++AF  V++I + V+ G  +R+ H N A+F   CIY+HIG
Sbjct: 41  CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFMLGCIYVHIG 100

Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           RG+YY SF L  V                  YVLP GQ+++W A VI+++++AIP +G  
Sbjct: 101 RGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQVISSMVTAIPKVGGE 160

Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           +   + GG+AV N TL R ++                      +GS NP
Sbjct: 161 VAMWVWGGYAVGNITLKRLFSVHFLLPFVILAVVLLHLLFLHSSGSGNP 209


>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
           Cytochrome b - Ranina ranina
          Length = 179

 Score =  121 bits (292), Expect = 1e-26
 Identities = 62/125 (49%), Positives = 74/125 (59%)
 Frame = +3

Query: 216 ANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 395
           ANGASFFFIC+Y+HIGRGI+Y S+   +  +                YVLP GQ+SFWGA
Sbjct: 1   ANGASFFFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGA 60

Query: 396 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 575
           TVITNL SAIP++GT LV  I GGF+V NATLTRF+T                     Q 
Sbjct: 61  TVITNLFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQA 120

Query: 576 GSNNP 590
           G+NNP
Sbjct: 121 GANNP 125


>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
           precursor (mRNA maturase bI1) (COB intron protein)
           [Contains: Truncated non-functional cytochrome b; DNA
           endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
           Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
           I-AniI precursor (mRNA maturase bI1) (COB intron
           protein) [Contains: Truncated non-functional cytochrome
           b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
           Emericella nidulans (Aspergillus nidulans)
          Length = 488

 Score =  121 bits (291), Expect = 1e-26
 Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
 Frame = +3

Query: 78  ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           ALCL IQI+TG+ L ++YT ++  AF  V +I R+VN G ++R LH+N AS FF  +YLH
Sbjct: 37  ALCLGIQIVTGVTLAMHYTPSVSEAFNSVEHIMRDVNNGWLVRYLHSNTASAFFFLVYLH 96

Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
           IGRG+YY S+                         YVLP GQ+S WGATVITNL+SAIP+
Sbjct: 97  IGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGATVITNLMSAIPW 156

Query: 432 LGTILVN*I*GGFAVD 479
           +G  +V  I GG   D
Sbjct: 157 IGQDIVEFIWGGLYTD 172


>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
           Cytochrome b - Caenorhabditis elegans
          Length = 370

 Score =  118 bits (285), Expect = 8e-26
 Identities = 63/141 (44%), Positives = 80/141 (56%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + LI QI+TG FL  YYT +  +AF  V YI   VN+G + R  H NGAS FFI +YLHI
Sbjct: 36  MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            +G+++ S+ LK V +                YVL   Q+SFW A VIT+LLS IP  G 
Sbjct: 96  FKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGP 155

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
            +V  I  GF V  ATL  F+
Sbjct: 156 TIVTWIWSGFGVTGATLKFFF 176


>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
           cellular organisms|Rep: Cytochrome b/b6, N-terminal
           domain - Acidovorax sp. (strain JS42)
          Length = 473

 Score =  118 bits (283), Expect = 1e-25
 Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L L+IQI+TG+FL ++Y  +   AF  V YI R+V +G +IR +H+ GAS FF+ +YLH+
Sbjct: 60  LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAFFVVVYLHM 119

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG+ Y S+    + V +                Y+LP GQ+S+WGA VI NL SAIP++
Sbjct: 120 FRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPFI 179

Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
           G  L   I G + V +ATL RF++
Sbjct: 180 GPDLALLIRGDYVVSDATLNRFFS 203


>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
           Cytochrome b - Hiatella arctica
          Length = 384

 Score =  117 bits (281), Expect = 2e-25
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           L +QI++G+ L++YY    +E AF  + +I R+VN G I+R++H  GAS FF  +Y H+G
Sbjct: 42  LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFFFMYCHVG 101

Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           RG+YY S+                       YVLP GQ+SFWGATVI+N L+ IP+ G  
Sbjct: 102 RGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNFLTVIPFFGDT 161

Query: 444 LVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           L+  + GG++V + TL+RF+                      + G++NP
Sbjct: 162 LLKYVLGGYSVCDLTLSRFFVAHFLAPFLISLMVLFHLIWGHEKGASNP 210


>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
           jecorina|Rep: Apocytochrome B - Trichoderma reesei
           (Hypocrea jecorina)
          Length = 427

 Score =  116 bits (280), Expect = 3e-25
 Identities = 61/130 (46%), Positives = 82/130 (63%)
 Frame = +3

Query: 78  ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           A+CLIIQI+TG+ L ++Y  ++  AF  + +I R+VN G +IR LH+N AS FF  +YLH
Sbjct: 37  AVCLIIQIVTGVTLAMHYNPSVAEAFNSIEHIMRDVNNGWLIRYLHSNTASAFFFLVYLH 96

Query: 258 IGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
           IGRG+YY S+                       YVLP GQ+S WGATVITNL+SAIP++G
Sbjct: 97  IGRGLYYASYR------------APRTLAWVSLYVLPYGQMSLWGATVITNLISAIPWIG 144

Query: 438 TILVN*I*GG 467
             +V  + GG
Sbjct: 145 QDIVEFVWGG 154


>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
           Cytochrome b - Brugia malayi (Filarial nematode worm)
          Length = 362

 Score =  114 bits (275), Expect = 1e-24
 Identities = 63/142 (44%), Positives = 84/142 (59%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + L+ QIITG FLT YYTA    AF  V YI   VN G ++R +H+NGAS FF+ IYLHI
Sbjct: 30  IMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            +G+   S+ L  V +                YVL  GQ+S+W A VIT+L++++PYLG 
Sbjct: 88  FKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITSLMTSVPYLGK 147

Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
            +V  I G F+V   TL  FY+
Sbjct: 148 YMVWWIWGSFSVCENTLKFFYS 169


>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
           organisms|Rep: Cytochrome b - Chromatium vinosum
           (Allochromatium vinosum)
          Length = 411

 Score =  112 bits (269), Expect = 7e-24
 Identities = 62/172 (36%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L L+IQI+TG++L + Y  +  +AF  V YI R+V++G +IR +H+ GAS FFI IYLH+
Sbjct: 47  LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIVIYLHM 106

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG+   S+    + + +                Y+LP GQ+S+WGA VI NL +A+P +
Sbjct: 107 FRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAVPVV 166

Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           G  L   + G F + +ATL RF+                        GSNNP
Sbjct: 167 GEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLAGLVFLHIVALHHVGSNNP 218


>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
           Cytochrome b - Agamermis sp. BH-2006
          Length = 388

 Score =  111 bits (268), Expect = 9e-24
 Identities = 66/172 (38%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
 Frame = +3

Query: 78  ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           +L + IQIITGLFLT YY  N E  F  +  I     YG ++  +H N +S  F  IYLH
Sbjct: 33  SLIMSIQIITGLFLTFYYE-NSENCFDSIYIIHIETFYGVLVHFIHLNVSSIIFFLIYLH 91

Query: 258 IGRGIYYESFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
           + +G+ + SF++ K   +                YVLP GQ+S WGATVITNLLSAIP +
Sbjct: 92  MTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGATVITNLLSAIPVI 151

Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           G ++V  I GG+ V N T+  F++                       GSNNP
Sbjct: 152 GKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIILIFIMIHLIILHYYGSNNP 203


>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
           Cytochrome b - Priapella chamulae
          Length = 256

 Score =  110 bits (265), Expect = 2e-23
 Identities = 48/72 (66%), Positives = 59/72 (81%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCLI QI+TGLFL ++YT++I  AF  V +ICR+VNYG +IR +HANGASFFFICIY HI
Sbjct: 39  LCLIAQILTGLFLAMHYTSDISTAFSSVTHICRDVNYGWLIRNMHANGASFFFICIYFHI 98

Query: 261 GRGIYYESFNLK 296
           GRG+YY S+  K
Sbjct: 99  GRGLYYGSYLYK 110


>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
           Cytochrome b - Lemmus lemmus (Norway lemming)
          Length = 211

 Score =  108 bits (259), Expect = 1e-22
 Identities = 45/71 (63%), Positives = 60/71 (84%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCLIIQI+TGLFL ++YT++   AF  V +ICR+VNYG +IR +HANGAS FFIC++LH+
Sbjct: 20  LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79

Query: 261 GRGIYYESFNL 293
           GRG+YY S+N+
Sbjct: 80  GRGVYYGSYNM 90


>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
           Cytochrome b - Pfiesteria piscicida
          Length = 374

 Score =  107 bits (258), Expect = 1e-22
 Identities = 56/142 (39%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + +I+QIITG+ L ++YT+++  A++ + ++ R V YG  +R  H++GASF F+ ++LH+
Sbjct: 46  VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105

Query: 261 GRGIYYES-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
           GR ++Y S F                       YVLP GQ+SFWGATVITNLLS  P   
Sbjct: 106 GRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATVITNLLSPFP--- 162

Query: 438 TILVN*I*GGFAVDNATLTRFY 503
             L+  + GG+ V + TL RF+
Sbjct: 163 -SLIEWVSGGYCVHSPTLKRFF 183


>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
           spiralis|Rep: Apocytochrome b - Trichinella spiralis
           (Trichina worm)
          Length = 371

 Score =  107 bits (257), Expect = 2e-22
 Identities = 58/170 (34%), Positives = 87/170 (51%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + + IQI+TGL L +Y++ +   AF  +  + R V +G ++R +H NGASF F+ +Y H+
Sbjct: 36  MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGASFIFMTMYAHM 95

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            +G+ Y SF L    L                YV+P G +SFW ATVIT+ +SAIP LG 
Sbjct: 96  FKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAATVITSFMSAIPILGE 155

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            ++  I GG+++   TL  F+T                       GS+NP
Sbjct: 156 SILYWIWGGYSITGRTLQFFFTLHYLLPFVISAIAMIHLLLLHSKGSSNP 205


>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
           Cytochrome b - Crassostrea virginica (Eastern oyster)
          Length = 403

 Score =  105 bits (252), Expect = 8e-22
 Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L L  QI++GL LT+ YTA+  +A   ++Y+ R+ NYG IIR+LH  GAS FF   Y H+
Sbjct: 40  LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLFFALTYAHV 99

Query: 261 GRGIYYESF-NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
            RG++Y ++    +V                  YVLP G +S+WG TVITN+++ +P  G
Sbjct: 100 ARGVFYGAYLKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVITNMMTVVPG-G 158

Query: 438 TILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
              ++   GGF + + TL R +                      Q GS+NP
Sbjct: 159 ARALDWFQGGFVISSLTLKRVFVLHFILPFVILGLALVHVLILHQNGSSNP 209


>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
           Cytochrome b - Plasmodium falciparum
          Length = 376

 Score =  104 bits (250), Expect = 1e-21
 Identities = 58/141 (41%), Positives = 78/141 (55%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +   IQIITG+FL   YT ++  A+Y + +I R +  G   R +HA GAS  F+  YLHI
Sbjct: 34  IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            RG+ Y    L    +                YVLP GQ+S+WGATVITNLLS+IP    
Sbjct: 94  LRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLLSSIP---- 149

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
           + V  I GG+ V + T+ RF+
Sbjct: 150 VAVIWICGGYTVSDPTIKRFF 170


>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
           Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
          Length = 378

 Score =  101 bits (243), Expect = 1e-20
 Identities = 43/72 (59%), Positives = 57/72 (79%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +CL++QIITGLFL ++YTA+   AF  + +ICR+VNYG +IR  HANGAS FFIC+Y+HI
Sbjct: 39  VCLLLQIITGLFLAMHYTADTTSAFSSIAHICRDVNYGWVIRYTHANGASMFFICLYIHI 98

Query: 261 GRGIYYESFNLK 296
            RG+YY S+  K
Sbjct: 99  ARGLYYGSYLFK 110


>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
           precursor [Contains: Truncated non-functional cytochrome
           b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
           Ustilago maydis|Rep: Probable intron-encoded
           endonuclease bI1 precursor [Contains: Truncated
           non-functional cytochrome b; Intron-encoded endonuclease
           bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
          Length = 410

 Score =  100 bits (240), Expect = 2e-20
 Identities = 43/69 (62%), Positives = 58/69 (84%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +CLIIQI+TG+FL ++YT ++++AF  V +I R+VNYG +IR LHAN ASFFFI +YLHI
Sbjct: 38  VCLIIQILTGVFLAMHYTPSVDLAFISVEHIMRDVNYGWLIRYLHANTASFFFIFVYLHI 97

Query: 261 GRGIYYESF 287
           GRG+YY S+
Sbjct: 98  GRGLYYGSY 106


>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
           mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
          Length = 418

 Score =  100 bits (239), Expect = 3e-20
 Identities = 60/172 (34%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + L IQIITGL L ++Y A+   AF  +  I R V +G +IR  H  GAS FF  +Y+H+
Sbjct: 54  IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLFFAALYIHM 113

Query: 261 GRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG+YY S+    + V L                Y L  GQ+S+W A VIT L S +P++
Sbjct: 114 FRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVITGLFSVVPFV 173

Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           G  +   + GGFA + AT+ RF+                      + GS NP
Sbjct: 174 GEKIRIWVLGGFAPNAATVNRFFVLHFTLPFVILAVVGLHVWALHRQGSGNP 225


>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
           cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
           Ubiquinol cytochrome c oxidoreductase, cytochrome b
           subunit - Nitratiruptor sp. (strain SB155-2)
          Length = 465

 Score =  100 bits (239), Expect = 3e-20
 Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
 Frame = +3

Query: 93  IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           I +I+G+FL +YY  + ++AF  VNY I + V +G + R +HA  AS  F+ IY+H+  G
Sbjct: 53  ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAASVVFLVIYIHMFTG 112

Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           IYY S+    + + +                Y+LP GQ+S+W A VITNL   IP++G  
Sbjct: 113 IYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQVITNLFGGIPFIGDD 172

Query: 444 LVN*I*GGFAVDNATLTRFY 503
           LV  I G F V + TLTRF+
Sbjct: 173 LVVWIRGNFYVSDPTLTRFF 192


>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
           cytochrome B subunit; n=20; cellular organisms|Rep:
           Ubiquinol cytochrome C oxidoreductase, cytochrome B
           subunit - Xylella fastidiosa
          Length = 420

 Score = 98.7 bits (235), Expect = 9e-20
 Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           L+ Q++TG+FL ++Y  ++  AF  +   I R+V +G +IR +H+ GAS FFI +YLH+ 
Sbjct: 54  LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLFFIGVYLHMF 113

Query: 264 RGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
           RG+ Y S     + V +                YVLP GQ+SFWGA VI +L  AIP +G
Sbjct: 114 RGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVIISLFGAIPVIG 173

Query: 438 TILVN*I*GGFAVDNATLTRFY 503
             L   I G +   + TL RF+
Sbjct: 174 NGLDEWIMGDYLPSDVTLNRFF 195


>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
           thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
          Length = 372

 Score = 98.7 bits (235), Expect = 9e-20
 Identities = 59/166 (35%), Positives = 83/166 (50%)
 Frame = +3

Query: 93  IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
           IQII+GL L+ +Y  ++   F  +  I ++V  G  IR +H++G S F   +YLHI RG+
Sbjct: 39  IQIISGLILSWFYFIDLSGGFKSLILIMQDVWGGWFIRFIHSSGVSLFMFIMYLHILRGL 98

Query: 273 YYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN 452
            Y SF    V                  YVLP G +S+WG TV+TN+LSAIP +G  LV 
Sbjct: 99  IYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTNMLSAIPMVGVYLVE 158

Query: 453 *I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            I GG +   +TL RF++                     + GS+NP
Sbjct: 159 TIWGGSSAGVSTLVRFFSFHYLLSLFIMVFILIHLILLHECGSSNP 204


>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
           cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
           Ubiquinol-cytochrome c reductase cytochrome b subunit -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 392

 Score = 97.9 bits (233), Expect = 2e-19
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
           +   I +GLFL I YT +I  AF  V  I R V  G  IR+LH  G +  F C+Y+HIGR
Sbjct: 53  MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVTMLFACLYIHIGR 112

Query: 267 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            ++Y S+    + + L                YVLP GQ+S+WGATVI N + AIP +G 
Sbjct: 113 SLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVILNAVHAIPLIGQ 172

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
            L   + GG  + N  L R +
Sbjct: 173 PLSELLLGGDTLGNVALHRLF 193


>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
           americanum|Rep: Cytochrome b - Xiphinema americanum
          Length = 366

 Score = 95.5 bits (227), Expect = 8e-19
 Identities = 56/141 (39%), Positives = 79/141 (56%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + + IQ+ +GL L   Y++   +A+  V  I R V  G ++R++H+N ASF F  +++H 
Sbjct: 33  ILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFFLMFMHF 91

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            RGI   SF L    +                YVLP GQ+SFWGATVI NLLS +PY G 
Sbjct: 92  FRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPWGQMSFWGATVIINLLSILPY-GK 150

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
           +LV  + GGF V  AT + F+
Sbjct: 151 MLVVWLWGGFYVSAATCSFFF 171


>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
           n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
           protein CKO_01262 - Citrobacter koseri ATCC BAA-895
          Length = 390

 Score = 93.9 bits (223), Expect = 3e-18
 Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
 Frame = +3

Query: 93  IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
           +QI++GL L ++Y     +AF  + +I R+V +G ++R  H+ GAS FF   YLHI R +
Sbjct: 41  VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFACYLHIFRAM 100

Query: 273 YYESFNLKY--V*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
           YY  +   Y  + +                Y L  GQ S+W ATVIT    AIP++G  L
Sbjct: 101 YYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAATVITGFTRAIPWVGDTL 160

Query: 447 VN*I*GGFAVDNATLTRFY 503
            + + GG+A    TL RFY
Sbjct: 161 YSFLVGGYAPGTPTLGRFY 179


>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 329

 Score = 93.5 bits (222), Expect = 3e-18
 Identities = 50/118 (42%), Positives = 63/118 (53%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +   IQI+TG+FL   Y+  I  A+Y + +I R +  G   R +HA GAS  F   YLHI
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHI 259

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG+ Y    L    +                YVLP GQ+S+WGATVITNLLS IP L
Sbjct: 260 LRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSGIPAL 317


>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
           reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
           (redback poison frog)
          Length = 109

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 20/89 (22%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYR--------------------VNYICRNVNYG*I 200
           LCLI QIITGLFL ++YTA+  +AF                      V +ICR+VNYG +
Sbjct: 3   LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWL 62

Query: 201 IRTLHANGASFFFICIYLHIGRGIYYESF 287
           +R LHANGASFFFICIYLHIGRG+YY SF
Sbjct: 63  LRNLHANGASFFFICIYLHIGRGMYYGSF 91


>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
           Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 423

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           LCL+IQI+TG+F+ ++Y++NIE+AF  V +I R+V+ G I+R LHANGASFFF+ +++H+
Sbjct: 38  LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHM 97

Query: 261 GRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWG 392
            +G+YY S+    V L                  Y    GQ+S WG
Sbjct: 98  AKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWG 143


>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
           Apocytochrome b - Bothropolys sp. SP-2004
          Length = 378

 Score = 91.9 bits (218), Expect = 1e-17
 Identities = 44/78 (56%), Positives = 53/78 (67%)
 Frame = +3

Query: 357 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 536
           YVLP GQ+SFWGATVITNL+SA+PY+GT++V  + GGFAVDNATLTRF++          
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIA 192

Query: 537 XXXXXXXXXXXQTGSNNP 590
                      QTGSNNP
Sbjct: 193 AMVILHLLFLHQTGSNNP 210



 Score = 36.7 bits (81), Expect = 0.41
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = +2

Query: 29  T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 208
           T PI +   +K+RI  S M +  N+  IIF+N L   Y N    S L+  K +  ++ + 
Sbjct: 24  TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83

Query: 209 ITC*WSFIFFYLHLFTYRTRNL 274
           ITC       YL + +  + N+
Sbjct: 84  ITCKRGINLLYLFMSSRWSSNM 105


>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
           Cytochrome b - Theileria parva
          Length = 363

 Score = 88.6 bits (210), Expect = 9e-17
 Identities = 54/170 (31%), Positives = 79/170 (46%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + LI+QI++GL LT +Y    E AF  ++ +     +G  +R  H+ G SF+F  +++HI
Sbjct: 29  ILLILQILSGLLLTFFYVPCKEGAFESLSRLVTETQFGWFVRLYHSVGVSFYFFFMFIHI 88

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
            +G++Y S  + +                   YVLP GQ+SFWGATVI+NLL        
Sbjct: 89  IKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATVISNLLEWFGKAKV 148

Query: 441 ILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           I      GGF V   TL RF+                      + GS+NP
Sbjct: 149 ITF----GGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLHREGSSNP 194


>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
           Cytochrome b - Galaxias sp. 'teviot'
          Length = 386

 Score = 87.8 bits (208), Expect = 2e-16
 Identities = 44/78 (56%), Positives = 50/78 (64%)
 Frame = +3

Query: 357 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 536
           YVLP GQ+SFWGATVITNLLSA+PY+G  LV  I GGF+VDNATLTRF+           
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191

Query: 537 XXXXXXXXXXXQTGSNNP 590
                      +TGSNNP
Sbjct: 192 GATVLHLLFLHETGSNNP 209


>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
           group|Rep: Cytochrome b - Neurospora crassa
          Length = 448

 Score = 84.2 bits (199), Expect = 2e-15
 Identities = 37/70 (52%), Positives = 52/70 (74%)
 Frame = +3

Query: 78  ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           A CLIIQI+TG+ L ++Y+ N+  AF  + +I R+VN G ++R LH+N AS FF  +YLH
Sbjct: 37  ACCLIIQIVTGVTLAMHYSPNVLEAFNSIEHIMRDVNNGWLVRYLHSNTASAFFFLVYLH 96

Query: 258 IGRGIYYESF 287
           IGRG+YY S+
Sbjct: 97  IGRGMYYGSY 106


>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
           gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
          Length = 300

 Score = 84.2 bits (199), Expect = 2e-15
 Identities = 54/142 (38%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +   IQI+ G+ L +     +  A+Y V +I R +  G   R +HA GASF FI  YLHI
Sbjct: 34  IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93

Query: 261 GRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL-G 437
            RG+ Y    L    +                YVLP GQ+SFW  TVITNLL    YL  
Sbjct: 94  LRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTVITNLL----YLFR 149

Query: 438 TILVN*I*GGFAVDNATLTRFY 503
           T  ++   GG+ V + TL RF+
Sbjct: 150 TCFMD--CGGYLVSDPTLKRFF 169


>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
           Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
           b precursor - Thiobacillus ferrooxidans
           (Acidithiobacillus ferrooxidans)
          Length = 402

 Score = 83.8 bits (198), Expect = 3e-15
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L +++Q+I+G FL  +Y    + AF  V  I  +  +G +IR +H +G S  FI +Y H+
Sbjct: 43  LMIVLQLISGFFLMAHYVPTSQDAFASVQGIMYDTKWGWLIRYMHVDGVSLIFILLYTHM 102

Query: 261 GRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG+ Y S     + V +                YVLP G +S+W   VIT+++ A+P +
Sbjct: 103 FRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWAGEVITSIMHALPVV 162

Query: 435 GTILVN*I*GGFAVDNATLTR 497
           G  L     GG  + +ATL R
Sbjct: 163 GPSLTTLTRGGPGIGSATLQR 183


>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
           Apocytochrome b - Doryphora sassafras
          Length = 347

 Score = 82.2 bits (194), Expect = 8e-15
 Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + L+IQI+TG+FL +++T ++++AF  V ++ R+V  G ++R +HANGAS F I ++L I
Sbjct: 30  ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLXI 89

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            RG     ++   ++V                       GQ+SFWG     +   AI  +
Sbjct: 90  FRGXXXXXYSSXXEFVRCXGVVXXXXMIVXAXXGXXPXXGQMSFWGXXXXXSXXXAIXXV 149

Query: 435 GTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
           G   V     GF+VD  TL    +                     Q GSNNP
Sbjct: 150 GDTXVTXXXXGFSVDXXTLNXXXSLHHXLPLILVGASLLHLAALHQYGSNNP 201


>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
           organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 215

 Score = 80.2 bits (189), Expect = 3e-14
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           C ++Q+ TG  +T YY   +  AF  V YI    N+G +IR++H   AS   + + LH+ 
Sbjct: 43  CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVF 102

Query: 264 RGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
           R      F    +   +                Y LP  QI +W   ++T +  AIP +G
Sbjct: 103 RVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIG 162

Query: 438 TILVN*I*GGFAVDNATLTRFYT 506
           + LV  + G  +V  +TLTRFY+
Sbjct: 163 SPLVELLRGSASVGQSTLTRFYS 185


>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
           Cytochrome b/b6 - Geobacter sulfurreducens
          Length = 367

 Score = 76.6 bits (180), Expect = 4e-13
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
 Frame = +3

Query: 93  IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGI 272
           IQ++TG+ L IYY  + + AF  V  I  +V +G +IR  HA G++     + LH+   +
Sbjct: 50  IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSNMMVAVLLLHMLSVL 109

Query: 273 YYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
           +  S+    +   L                Y+LP  Q+SFW  TV TN   AIP +G  L
Sbjct: 110 FMGSYKRPRELNWLTGFILFNLVLGISLTGYLLPWSQLSFWATTVATNSAGAIPVIGGYL 169

Query: 447 VN*I*GGFAVDNATLTRFY 503
           V  + GG  V   TL RF+
Sbjct: 170 VEFLRGGKLVGPPTLGRFF 188


>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
           Cytochrome b - Schistosoma mekongi
          Length = 372

 Score = 74.5 bits (175), Expect = 2e-12
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
           +IIQ+ +G+ L+++Y      +   + +   N+ Y  IIR +H    S  F  +Y+HIGR
Sbjct: 32  MIIQVFSGIVLSLFYDVLGNFSMLMM-WTDDNI-YCWIIRYIHIWCVSIIFFLVYVHIGR 89

Query: 267 GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 446
            +YY S+ +  V                  Y+LP  Q+S+W ATV+T+++ ++P +G ++
Sbjct: 90  SLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVLTSIILSVPVVGGLI 149

Query: 447 VN*I*GGFAVDNA-TLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNP 590
            + + GGF+V    TL R +                      Q+GS +P
Sbjct: 150 FSYVVGGFSVTLIDTLVRVFPVHISLGFILLGLIVLHLFYLHQSGSTSP 198


>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
           Cytochrome b6 - Heliobacillus mobilis
          Length = 213

 Score = 71.7 bits (168), Expect = 1e-11
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L  ++Q +TGLFL +YY    E AF  V  I   V +G  IR+LH   A+   + ++LH+
Sbjct: 40  LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHM 99

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            R  Y  SF    +   L                Y+LP  Q+S+W + +      ++P +
Sbjct: 100 LRVYYTGSFKKPRELNWLAGCFLLVLSLGLAFTGYLLPYEQLSYWASVIGAETAGSLPVV 159

Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
           G  +   + GG  V    L+RFY
Sbjct: 160 GATMKIMMQGGIKVTAEMLSRFY 182


>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
           Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
           papillata
          Length = 141

 Score = 70.5 bits (165), Expect = 3e-11
 Identities = 36/73 (49%), Positives = 42/73 (57%)
 Frame = +3

Query: 372 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 551
           GQ+ FWGATVITN LS IPY G  +VN I GGF+V + TLTRFYT               
Sbjct: 5   GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64

Query: 552 XXXXXXQTGSNNP 590
                 +TGS+NP
Sbjct: 65  HLVFLHRTGSSNP 77


>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
           koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
          Length = 108

 Score = 70.1 bits (164), Expect = 4e-11
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +3

Query: 210 LHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFW 389
           LHANGASFFFICIYLHIGRG+YY S+  K                    YVLP GQ+SFW
Sbjct: 48  LHANGASFFFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFW 107

Query: 390 G 392
           G
Sbjct: 108 G 108


>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
           402|Rep: Cytochrome b - Sycoscapter sp. 402
          Length = 157

 Score = 70.1 bits (164), Expect = 4e-11
 Identities = 37/75 (49%), Positives = 44/75 (58%)
 Frame = +3

Query: 366 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 545
           P GQ+SFWGATVITNL+SAI Y+G  +V  + GGF+V +ATL RFYT             
Sbjct: 2   PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61

Query: 546 XXXXXXXXQTGSNNP 590
                   QTGS NP
Sbjct: 62  LIHLVFLHQTGSTNP 76


>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
           n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
           b gene - Chlamydomonas smithii
          Length = 374

 Score = 69.3 bits (162), Expect = 6e-11
 Identities = 30/68 (44%), Positives = 46/68 (67%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + L  Q++TG+ L ++Y  +++ AF  V ++  +V  G I+R  HANGAS FFI +YLH+
Sbjct: 38  MMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHV 97

Query: 261 GRGIYYES 284
            RG+YY S
Sbjct: 98  LRGMYYGS 105


>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
           Cytochrome b - Meloidogyne hapla (Root-knot nematode
           worm)
          Length = 132

 Score = 68.1 bits (159), Expect = 1e-10
 Identities = 29/71 (40%), Positives = 48/71 (67%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           IIQ+I+GL L++YY++    +F  + Y+   VN G +IR +H N  SFFF+ ++LHI + 
Sbjct: 38  IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHILKA 97

Query: 270 IYYESFNLKYV 302
           +++ S+ LK V
Sbjct: 98  LFFFSYRLKMV 108


>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
           Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
           balcanica
          Length = 81

 Score = 64.9 bits (151), Expect = 1e-09
 Identities = 36/81 (44%), Positives = 50/81 (61%)
 Frame = -2

Query: 244 QIKKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDP 65
           Q+KKN+APL   +R+  P FT RQ+  T  KA+ +  V  + KN+PV    I+HK S +P
Sbjct: 1   QMKKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEP 60

Query: 64  IFHQEEILDGLGKSINELLMI 2
            FH  E+L+G GKS +  L I
Sbjct: 61  KFHHTEMLEGAGKSTSASLSI 81


>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
           aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
           Herpetosiphon aurantiacus ATCC 23779
          Length = 562

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           +++ ITGL L IYY+ +   A+  +  I  +V  G ++R +H  GA F    + LH+ R 
Sbjct: 86  VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVILHMLRT 145

Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
            +  S+    +++                  Y+LP  Q++FW  T+ +++  A P +G  
Sbjct: 146 YFTASYKAPRQFIWFTGMILLFMTLLLSFSGYLLPWDQLAFWAVTIGSSMADAAPGVGPA 205

Query: 444 LVN*I*GGFAVDNATLTRFY 503
           +   + GG  +    L RFY
Sbjct: 206 IGRLLRGGAEIGAGALLRFY 225


>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
           Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
           Desulfitobacterium hafniense (strain DCB-2)
          Length = 215

 Score = 63.3 bits (147), Expect = 4e-09
 Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L  ++Q++TG+ L +YY   +E A+  V +I   V  G  +R++H   A+   I + LH 
Sbjct: 42  LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVVLHF 101

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            R ++  ++    ++  +                Y+LP  Q+ +W A + T +L +IP +
Sbjct: 102 LRVVFTGAYKPPRQFNWVVGVLLLLLVILFCFTGYLLPLDQVGYWAAIIGTKILGSIPIV 161

Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
           G  L+     G  + + TL RF+
Sbjct: 162 GDQLLLLGQAGTKITDHTLMRFF 184


>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
           javanica|Rep: Cytochrome b - Meloidogyne javanica
           (Root-knot nematode worm)
          Length = 113

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 26/74 (35%), Positives = 46/74 (62%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           +   +Q+I+GL L+++Y ++   +F  + Y+   VN G +IR +H N  S FF+ + LH+
Sbjct: 35  IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHM 94

Query: 261 GRGIYYESFNLKYV 302
            + ++Y SF LK V
Sbjct: 95  LKALFYFSFRLKKV 108


>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
           Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
           C reductase - Symbiobacterium thermophilum
          Length = 258

 Score = 60.1 bits (139), Expect = 4e-08
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L  ++  +TG++L  YY  ++  A+  +  +  +V +G   R LH   A    I ++LH+
Sbjct: 64  LMFLMLTVTGVWLMFYYVPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVWLHM 123

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
            R  Y  S+    ++  +                Y+LP  Q+++W   V +N+    P +
Sbjct: 124 TRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLLPWDQLAYWAIQVGSNMAKVTPVI 183

Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
           GT +   +  G+ +  ATL R+YT
Sbjct: 184 GTYVQRALLDGYDIGPATLVRWYT 207


>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
           n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
           subunit of the bc complex - Leptospirillum sp. Group II
           UBA
          Length = 458

 Score = 59.7 bits (138), Expect = 5e-08
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASFFFICIYL 254
           LI+Q +TG+ L  YY    + A+  VNYI       ++ G +IR  H  GAS   + +  
Sbjct: 50  LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMVVLVGA 109

Query: 255 HIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 428
           H+ +   + ++    + + L                Y+LP  + ++WG  V TN++  +P
Sbjct: 110 HLLQVFLWGAYKRPREIMWLVGVILLALTMTAAFTGYLLPWDERAYWGTIVGTNMIGLVP 169

Query: 429 YLGTILVN*I*GGFAVDNATLTRFY 503
            +G +L + I GG  +   TL+ F+
Sbjct: 170 VVGPLLKSAIRGGSGLGALTLSHFF 194


>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
           Cytochrome b - Procladius villosimanus
          Length = 233

 Score = 58.8 bits (136), Expect = 9e-08
 Identities = 33/64 (51%), Positives = 35/64 (54%)
 Frame = +3

Query: 399 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTG 578
           VITNLLSAIPYLG  L   + GGFAVDNATLTRF+                      QTG
Sbjct: 1   VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60

Query: 579 SNNP 590
           S NP
Sbjct: 61  SPNP 64


>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
           cytochrome b subunit; n=1; Blastopirellula marina DSM
           3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
           subunit - Blastopirellula marina DSM 3645
          Length = 639

 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           ++Q+ITG FL + Y+AN + A+  V YI   +  G I+R LH   A    + + LH  + 
Sbjct: 45  VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLHHFMAQAMIVLLALHFLQV 104

Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
           +   ++    ++                   Y+LP  Q  +W   V T L+  IP +G  
Sbjct: 105 VIDGAYKAPREFNFWTGLILMKIVLGLSLTGYLLPWDQKGYWATKVATTLMGLIPAIGGD 164

Query: 444 LVN*I*GGFAVDNATLTRFY 503
           L   + GG    +ATLTRF+
Sbjct: 165 LQKVVVGGTDYGHATLTRFF 184


>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
           Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
           b/b6-like protein - Rubrobacter xylanophilus (strain DSM
           9941 / NBRC 16129)
          Length = 257

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
           + +Q +TG+ L  YY    + A+  V YI     +G +IR +H   A+F    I +H+ R
Sbjct: 56  ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLMAVIGMHMAR 115

Query: 267 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
             +  ++    +   +                Y+L   Q  FW + V   + S  P+LG 
Sbjct: 116 TFFSGAYKAPREMNWIVGVILLLLVIGLAFTGYLLRWDQDGFWASVVGIKIGSYSPFLGP 175

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
            + + + GG  V  ATL+RF+
Sbjct: 176 YITHFLLGGDVVGPATLSRFF 196


>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
           Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
           Anaeromyxobacter sp. Fw109-5
          Length = 448

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
 Frame = +3

Query: 78  ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           A  L++ +++GL L   +  ++E A+  V  I   V +G  IR++H   A      ++LH
Sbjct: 68  AALLLLLVVSGLPLLFLHVPSVERAYGSVKDIEYVVTFGSWIRSVHRIAAHLMVAAVFLH 127

Query: 258 IGR----GIYYESF----NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 413
           + R    G Y        + ++  +                Y+LP  Q+++W  TV TN+
Sbjct: 128 LVRVFLTGAYKNGTGRGQHREWNWVLGVVMFLVTLFLSFTGYLLPWDQLAYWAVTVGTNI 187

Query: 414 LSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
            SA+P +G  +   + GG  +D  TL RFY
Sbjct: 188 ASAVPLVGAEVRELLLGGRNIDQPTLIRFY 217


>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
           cytochrome b subunit; n=24; Bacillaceae|Rep:
           Menaquinol-cytochrome c reductase cytochrome b subunit -
           Bacillus subtilis
          Length = 224

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR- 266
           +IQ+++G+FLT+YY  +I+ A+  V Y+   V +G I+R +H  GAS   + ++LH  R 
Sbjct: 53  VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVMMFLHTLRV 112

Query: 267 ---GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
              G Y +   L ++                  Y+LP    + +   V   +  A P +G
Sbjct: 113 FFQGAYKKPRELNWI--VGVLIFFVMLGLGFTGYLLPWDMKALFATKVGLQIAEATPLIG 170

Query: 438 TILVN*I*GGFAVDNA-TLTRFY 503
           T +   + G   +  A TLTRF+
Sbjct: 171 TQVKTLLAGHPDIVGAQTLTRFF 193


>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
           Macaca fascicularis|Rep: Putative uncharacterized
           protein - Macaca fascicularis (Crab eating macaque)
           (Cynomolgus monkey)
          Length = 115

 Score = 56.8 bits (131), Expect = 4e-07
 Identities = 37/111 (33%), Positives = 56/111 (50%)
 Frame = +2

Query: 107 WIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL*IF 286
           W   +N L + +    L +  Y P+ KL L+ S     WS    +L   T+R+R LL + 
Sbjct: 5   WPTISNTLLTGHLLRLLLNCTYHPRRKLRLDYSLSPRQWSLYALHLPFPTHRSRPLLWLI 64

Query: 287 *LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN 439
                + + +Y   Y ++N FH L   +R NI LG N N+K  I NP++RN
Sbjct: 65  SPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNSNHKPTISNPVYRN 115


>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
           sebastis|Rep: Cytochrome b - Microcotyle sebastis
          Length = 386

 Score = 56.8 bits (131), Expect = 4e-07
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVN------YG*IIRTLHANGASFFFICI 248
           + +Q++TG+F  I Y    +   + VN                ++R +H  GAS  FIC+
Sbjct: 47  MALQLVTGIFCAIEYLNLTKKHLFHVNVGVGEPGPIMDGLVSDLLRFMHLWGASLVFICL 106

Query: 249 YLHIGRGIYYESFNLKYV-*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAI 425
             HIGRG+YY S++   V                   Y+LP  Q+S+W   VI+ +  ++
Sbjct: 107 LGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGVVISTIFLSL 166

Query: 426 PYLGTILVN*I*GGFAVDNATLTRFY 503
           P +G  L + + G +   +   +R +
Sbjct: 167 PVIGPHLYSFLLGSYDFGDGIXSRVF 192


>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
           polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
          Length = 211

 Score = 56.4 bits (130), Expect = 5e-07
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = +3

Query: 150 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 296
           AF  V YI   VNYG I R  H NGAS FF+ +YLHI +G++  S+ LK
Sbjct: 2   AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMSYRLK 50


>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
           Cytochrome b - Ovis aries (Sheep)
          Length = 113

 Score = 55.6 bits (128), Expect = 8e-07
 Identities = 39/112 (34%), Positives = 57/112 (50%)
 Frame = +2

Query: 53  LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 232
           +MK  +    + N ++    I +N L++ + NS L    +LP+ KLWLN    T      
Sbjct: 1   MMKLWLSPRHLLNFTDSNRPIPSNTLYTXHNNSILLCNPHLPRRKLWLNYPIYTRKRGIN 60

Query: 233 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 388
            FYL ++  RTR +L I  L   M + +   I  NS+  HRLC T+R NI L
Sbjct: 61  IFYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112


>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
           Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
           N-terminal domain - Solibacter usitatus (strain
           Ellin6076)
          Length = 499

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           ++Q++TG+ L + Y  +   A+  +  +  +++ G  IR LH  G++F    + +H+ + 
Sbjct: 49  LLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWGSNFMIAVVLVHMAQV 108

Query: 270 IYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
             + ++    +   +                 V+   Q ++WG  +  +++S +P LG  
Sbjct: 109 FLFGAYKYPRELTWILGVFLLLVTLAMGFTGQVMRFDQDAYWGLGIGASIVSRVPLLGPW 168

Query: 444 LVN*I*GGFAVDNATLTRFY 503
           LV  + GG  +  ATL+RF+
Sbjct: 169 LVTLVLGGPIIAGATLSRFF 188


>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
           Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
           Solibacter usitatus (strain Ellin6076)
          Length = 281

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           I  + TG  L  YY  +  +AF  + Y+  +V +G ++R +H  GA    I + LH+ R 
Sbjct: 82  ITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGAHLMVIMVELHMFRV 141

Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 437
               S+    ++  +                Y+LP  Q+ FW  TV TN+  A P LG
Sbjct: 142 FLTGSYKKPREFNWVVGVLLLVLTLLLSFTGYLLPDDQLGFWAVTVGTNMARATPLLG 199


>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
           subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
           cytochrome b subunit - Chlorobium tepidum
          Length = 428

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           IIQI+TGL L  YY      AF    +I   V +G +IR +HA  A+   + +++H+   
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHMFST 177

Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
            + +S+    + + +                Y+LP  +++F+   V T +    P  G  
Sbjct: 178 FFMKSYRKPRELLWVSGFILLVLTLGFGFTGYLLPWNELAFFATQVGTEVPKVAPG-GAF 236

Query: 444 LVN*I*GGFAVDNATLTRFYT 506
           LV  + GG  V   TLTR ++
Sbjct: 237 LVEILRGGPDVSGETLTRMFS 257


>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
           Cytochrome b - Elephas maximus (Indian elephant)
          Length = 102

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 24/42 (57%), Positives = 31/42 (73%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 209
           CL+ QI+TGLFL I Y  +   AF  +++ICR+VNYG IIRT
Sbjct: 8   CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49


>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
           8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
          Length = 665

 Score = 53.2 bits (122), Expect = 4e-06
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           L ++++++TG  L   Y+ +   A+  V+YI   V+ G  +R LH   A    + I +HI
Sbjct: 46  LMMLVEMVTGALLMTVYSPSEASAWGSVHYIETQVDLGWFVRGLHHYTAHMMIVAIVVHI 105

Query: 261 GRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
              I    +    +++                    LP  Q  +W   + T +   +P +
Sbjct: 106 FLVIISAGYRKPKEFIYWTSLLIGGVIIGLTITGNPLPWDQKGYWSYQIETGIAGTMPVI 165

Query: 435 GTILVN*I*GGFAVDNATLTRFYT 506
           G+ L + + GG    N TLTR YT
Sbjct: 166 GSTLRSLVVGGSEFGNLTLTRLYT 189


>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
           Cytochrome b - Aquifex aeolicus
          Length = 409

 Score = 52.8 bits (121), Expect = 6e-06
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
 Frame = +3

Query: 93  IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN-GASFFFICIYLHIGRG 269
           IQII+G+ L +YY    +     V+ +    N   +    H   GA+FF   +YLH+  G
Sbjct: 50  IQIISGMVLILYYNLQSQ-TLLTVHLLDNGRNSLRMALQAHTRTGANFFMAIVYLHMFTG 108

Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL---LSAIPYL 434
           IYY ++    + V +                Y+LP GQ+S+WG  V T +   L+  P L
Sbjct: 109 IYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGFIVTTEIPGSLADAPIL 168

Query: 435 GTI-------LVN*I*GGFAVDNATLTRFY 503
             I       +V  + GG+ V + TL R +
Sbjct: 169 KPIFKAIAETIVLWMKGGYVVTDVTLGRVF 198


>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
           Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
           N-terminal domain - Solibacter usitatus (strain
           Ellin6076)
          Length = 545

 Score = 52.4 bits (120), Expect = 8e-06
 Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           ++Q  TG+ L   Y      A+  + YI   +  G ++R LH  GAS   + + LH+ + 
Sbjct: 49  MVQAFTGILLAFNYAPTPGEAYNSLRYILTELTAGRLMRGLHHWGASMIIVVVVLHMVQV 108

Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
             Y ++    +   +                Y+LP    ++WG  V T + +  P +G  
Sbjct: 109 FLYGAYKKPREATWMVGVVLFLVTLAYGLTGYLLPWDNRAYWGTVVATKIAAQAPVVGPY 168

Query: 444 LVN*I*GGFAVDNATLTRFY 503
           L   + G  +V   T  RFY
Sbjct: 169 LSRLLGGEGSVGVVTFARFY 188


>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
           N-terminal domain - Syntrophobacter fumaroxidans (strain
           DSM 10017 / MPOB)
          Length = 358

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
 Frame = +3

Query: 78  ALCLIIQI-ITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYL 254
           +L L++ + ++G FL  YY+     A+  V++   +V +G I+R +H    +   + + L
Sbjct: 44  SLVLVVMLFLSGAFLMFYYSPTPGAAYDSVDFAQFSVPFGDIVRGVHYYAWNLLLVVLGL 103

Query: 255 HIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 428
           H+       ++    ++V +                 +LP  Q  +W   V  +++S+IP
Sbjct: 104 HLAGTFLTAAYQAPRQFVWISGVLIMLVVPLFIITGDLLPWDQKGYWTTQVRNSIISSIP 163

Query: 429 YLGTILVN*I*GGFAVDNATLTRFY 503
            +G + +  + GG      TLTRFY
Sbjct: 164 VVGDLTLRLLQGGPRTGIVTLTRFY 188


>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
           marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
           marina DSM 3645
          Length = 494

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
           L++QI+TG+ L + Y      A+  + Y+     +G ++R +H   A+   + + +H+ +
Sbjct: 51  LMLQIVTGVCLAMIYQPTAADAYASLEYLNYEAPFGWLLRAIHYWSATGMVVMLMVHMTQ 110

Query: 267 GIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
                +F    +   +                 VL     S+WG +V  +    +P+ G 
Sbjct: 111 VFLMGAFKYPRELTWIVGVGLLTTTLVLAFTGQVLRYDGDSYWGVSVAVSAAGRVPFAGP 170

Query: 441 ILVN*I*GGFAVDNATLTRFYT 506
            +V+ I GG  + + TL+RF+T
Sbjct: 171 SIVHLILGGEYIGSETLSRFFT 192


>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
           russelli|Rep: Cytochrome b - Decapterus russelli (Indian
           scad)
          Length = 102

 Score = 50.0 bits (114), Expect = 4e-05
 Identities = 23/65 (35%), Positives = 38/65 (58%)
 Frame = +2

Query: 83  MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYR 262
           + N  N +W +  + LH ++ N F     +LP+CKL L +S  TC W  +  +L+L +YR
Sbjct: 7   LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWRILLLHLYLSSYR 66

Query: 263 TRNLL 277
           +R +L
Sbjct: 67  SRPIL 71


>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
           Cytochrome b6 - Halobacterium salinarium (Halobacterium
           halobium)
          Length = 270

 Score = 50.0 bits (114), Expect = 4e-05
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYY-------TANIE---IAFYRVNYICRNVNYG*IIRTLHANGAS 230
           L  ++  I+G  L  YY       T  ++   +A+  V  I  ++N+G  +R+LH   A 
Sbjct: 87  LSYVVAAISGALLGFYYSPSAAAATCGVDGSTVAYCAVAGIMTDLNFGFFLRSLHRWAAQ 146

Query: 231 FFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 398
                ++LH+ R    G Y E   + +  L                Y+LP  Q+++W   
Sbjct: 147 VMTAAVFLHMLRVYFTGSYKEPREVNW--LIGIVLLSLTMVFGYTGYLLPWDQLAYWAGQ 204

Query: 399 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
           +   +  +IP +G  +   + GGF++  ATL R Y
Sbjct: 205 IGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQRMY 239


>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
           Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
           Solibacter usitatus (strain Ellin6076)
          Length = 438

 Score = 49.6 bits (113), Expect = 5e-05
 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           +I + TG+ L  YY  +   A+ R+  +   V +G  +R +H   A      ++LH+ R 
Sbjct: 81  VILVATGILLMFYYVPSTTQAYDRMLDLRGTVAFGTFLRNMHRWSAHGMVAIVFLHMCRV 140

Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 443
            +  S+    ++  +                Y+LP  Q++FW  TV T++    P +G  
Sbjct: 141 FFTGSYKKPREFNWVLGVVLFLLTLFLSFTGYLLPWDQLAFWAITVGTSIAGYAPVVGQD 200

Query: 444 LVN*I*GGFAVDNATLTRFY 503
           +   + G   V    L RFY
Sbjct: 201 IKFLLLGDATVGQEALLRFY 220


>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
           protein - Plesiocystis pacifica SIR-1
          Length = 587

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
 Frame = +3

Query: 96  QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 275
           Q++ G+ L  YY+ +   A+    YI   V  G  +R LH +G+S   +   LH+ + + 
Sbjct: 47  QVVLGILLATYYSPSATDAWASTAYIQDQVAGGWFLRGLHHHGSSAMVVVTLLHLMQVVL 106

Query: 276 YESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 449
             ++    +                    Y+LP  Q  +W   V T ++  +P  G  + 
Sbjct: 107 AGAYRAPREVNWWTGLAMGGLVLAFALTGYLLPWDQKGYWATQVATGIMGTVPG-GEPMQ 165

Query: 450 N*I*GGFAVDNATLTRFY 503
           + + GG    N T+TRFY
Sbjct: 166 HALQGGDQYGNLTITRFY 183


>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
           Cytochrome b - Eulemur mongoz (Mongoose lemur)
          Length = 59

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +3

Query: 219 NGASFFFICIYLHIGRGIYYESFNL 293
           NGAS FF+C+++HIGRG+YY SF L
Sbjct: 21  NGASMFFLCLFIHIGRGLYYGSFTL 45


>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
           Cytochrome oxidase B - Pyura haustor
          Length = 137

 Score = 46.4 bits (105), Expect = 5e-04
 Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 384 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXX 548
           FWG      +VI NLL+ IP++G   VN   GGF V  ATLTRFYT              
Sbjct: 2   FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61

Query: 549 XXXXXXXQTGSNNP 590
                  + GS+NP
Sbjct: 62  LHLVFLHEGGSSNP 75


>UniRef50_A6C5Y3 Cluster: Cytochrome b/b6-like protein; n=1;
           Planctomyces maris DSM 8797|Rep: Cytochrome b/b6-like
           protein - Planctomyces maris DSM 8797
          Length = 478

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
 Frame = +3

Query: 81  LC-LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLH 257
           LC  ++Q++TG+ L + Y    E  +  + YI      G ++R +H  GAS   +   +H
Sbjct: 46  LCAFVVQVLTGISLAMSYVPGGENTYESLVYITNTAPLGSLVRGMHYYGASAMVMLAVIH 105

Query: 258 IGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
           + +   + ++    +   +                 +L       W  TV   +    P 
Sbjct: 106 MVQVYMHATYKYPREMNWMSGVVLLFVVLGMAFTGQLLRWDANGVWSVTVAAEMAGRTPI 165

Query: 432 LGTILVN*I*GGFAVDNATLTRFY 503
           +G  L + I GG  V  +T+TRF+
Sbjct: 166 IGPTLAHFILGGETVGGSTITRFF 189


>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
           Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
           N-terminal - Chlorobium phaeobacteroides BS1
          Length = 333

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = +3

Query: 357 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
           Y+LP  Q+S+W  T++TN+L  +P +G  L   + GG  V+  TL+ FY
Sbjct: 45  YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFY 93


>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
           1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
           Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
           cytochrome b - Leishmania amazonensis
          Length = 250

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           ++ ++   FL + +   I I +Y    +   V++  +IR+ H    S  F  +Y+HI   
Sbjct: 17  VVCVVHDFFLVVLFV-QIGILYYFYEILI--VDF--VIRSTHICFTSLLFFLLYIHIFIK 71

Query: 270 -----IYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
                I +++  L +V                  YVLP   +S+WG TV +N+L+ +P +
Sbjct: 72  CIVLIILFDTHILVWV--VGFVIYIFIVIIGFIGYVLPCTMMSYWGLTVFSNILATVPVI 129

Query: 435 GTILVN*I*GGFAVDNATLTRFY 503
           GT L   I G   +++ TL + +
Sbjct: 130 GTWLCYWIWGSEYINDFTLLKLH 152


>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
           Cytochrome b - Trypanoplasma borreli
          Length = 372

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
 Frame = +3

Query: 87  LIIQIITGLFLT-IYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           + +QI+ G+ L+  ++   I   +     I    + G IIR+LH    S  +  +Y+HI 
Sbjct: 40  IALQILVGICLSWFFFRCIIPQNWIFTLLIHLEFDLGFIIRSLHIIFTSLLYFLLYIHII 99

Query: 264 RGIY----YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 431
           + I+    ++S  L +                   Y LP   +S+WG TV +N+L+ IP 
Sbjct: 100 KVIFLCLIFDSSMLVW--FFGFLIFIFILIIAFIGYTLPCTSMSYWGLTVFSNILATIPL 157

Query: 432 LGTILVN*I*GGFAVDNATLTRFYT 506
           +G  +   I     +++ TL + ++
Sbjct: 158 IGIYICQWIWCSEFINDFTLLKLHS 182


>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
           Cytochrome b - Aleyrodes elevatus
          Length = 232

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = +3

Query: 396 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 506
           TVITNLLS+IP  G ++V  I GG++V N TL RF++
Sbjct: 1   TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFS 37


>UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep:
           Cytochrome b - Laniarius aethiopicus
          Length = 98

 Score = 41.9 bits (94), Expect = 0.011
 Identities = 29/96 (30%), Positives = 46/96 (47%)
 Frame = +2

Query: 68  IPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLH 247
           +P   M N++N +    ++ L S++  S      ++PK  + + N   TC  S    YLH
Sbjct: 3   LPARPMLNHTNCHRTTTSHALXSRHYPSLFLRSPHMPKRTIRMTNPKPTCKRSLPILYLH 62

Query: 248 LFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHR 355
           L T+ TR LL +   +  +   +Y     NSNCF R
Sbjct: 63  LPTHWTRILLWLISKQRNLKRRSYPTPNPNSNCFRR 98


>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
           domesticum|Rep: Cytochrome b - Trichosporon domesticum
          Length = 132

 Score = 41.9 bits (94), Expect = 0.011
 Identities = 18/33 (54%), Positives = 26/33 (78%)
 Frame = +3

Query: 408 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 506
           N+LSAIP++G   V  + GGF+V+NATL RF++
Sbjct: 28  NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFS 60


>UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter
           violaceus|Rep: Cytochrome b6 - Gloeobacter violaceus
          Length = 217

 Score = 41.5 bits (93), Expect = 0.014
 Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGR 266
           L++ ++TG+ L   +  ++  A+     I    ++G  +R LH   +S   +C       
Sbjct: 50  LVLALLTGVLLGANFVPSLG-AYDSTRQITYQTSFGWAVRGLHWWASSLTLVCSLAFTAL 108

Query: 267 GIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 440
             +Y  F    K++                  Y LP  Q ++W   +  NLL+ +P LG 
Sbjct: 109 AYWYGYFRGPAKWMWWTGLVMGLMLLGANVTGYYLPLDQNAYWRLMIEANLLADVPVLGA 168

Query: 441 ILVN*I*GGFAVDNATLTRFY 503
            +   +  G  V +A++ R +
Sbjct: 169 AVKYFLLNGSGVSDASIARIH 189


>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
           Cytochrome b - Aegotheles savesi (New Caledonian
           owlet-nightjar)
          Length = 96

 Score = 40.7 bits (91), Expect = 0.025
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 87  LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 191
           L+  I+TGL L ++YTA+  +AF  V + CRNV Y
Sbjct: 4   LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38


>UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7;
           Desulfuromonadales|Rep: Cytochrome b/b6 - Geobacter
           sulfurreducens
          Length = 206

 Score = 40.7 bits (91), Expect = 0.025
 Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 2/137 (1%)
 Frame = +3

Query: 99  IITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYY 278
           I++G+ L  YY    + AF  + ++   V  G  +R LH   +  F   ++LHI R +  
Sbjct: 39  IVSGVLLLFYYQPTPDRAFDSILFLESTVVGGKYLRALHRLASHGFLCLMFLHILRVVLT 98

Query: 279 ESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN 452
            +F    +   +                Y+LP  Q++FW       LL+  P  G +   
Sbjct: 99  GAFRPPRELTWVVGVGLLGLSVFEAYTGYLLPMDQLAFWATRTGMELLATFPGGGWLRAV 158

Query: 453 *I*GGFAVDNATLTRFY 503
            +  G   ++ +L RFY
Sbjct: 159 LVPDGVG-ESLSLLRFY 174


>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
           Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
           Sulfolobus solfataricus
          Length = 549

 Score = 39.1 bits (87), Expect = 0.076
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           I+++ITG  + +YYT +    +    Y+   V YG  + +LH+ GA      + +H+ R 
Sbjct: 90  ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFLLLVHMTRN 147

Query: 270 IYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY-LGT 440
            +  ++    + + +                Y LP   IS+   T   NL S +P+ LG 
Sbjct: 148 FFVGAYRQPREIMWIVGAGLAGLTLTEAYLGYSLPYNLISWVATTTGLNLFSYMPFNLGY 207

Query: 441 IL 446
           ++
Sbjct: 208 LI 209


>UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep:
           Cytochrome b - Thermoplasma volcanium
          Length = 537

 Score = 39.1 bits (87), Expect = 0.076
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +3

Query: 90  IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 269
           + +++TG+ L  YY  +   A+        +V YG II T H  GA      +Y+H+ R 
Sbjct: 49  LYEVVTGIILLFYYQPSN--AYTSTETFLHSVPYGEIILTTHLYGAYIMIALVYIHLLRN 106

Query: 270 IYYESF 287
           I+  ++
Sbjct: 107 IFVGAY 112


>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
           Cytochrome b - Lyristes plebejus
          Length = 132

 Score = 38.7 bits (86), Expect = 0.10
 Identities = 19/35 (54%), Positives = 21/35 (60%)
 Frame = +2

Query: 428 LFRNYISKLNLRGICCR*CYINPILHISFFITVHY 532
           L   YISKLNL  ICC     N IL  +FF T+HY
Sbjct: 14  LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48


>UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep:
           Cytochrome b - Sulfolobus acidocaldarius
          Length = 563

 Score = 38.7 bits (86), Expect = 0.10
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +3

Query: 99  IITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 275
           IITGLFL +YY      A+     I  +V YG ++   H  G+    +  Y+H+ R  Y
Sbjct: 51  IITGLFLLLYYQP--AFAYQSTQTIINSVPYGSVLLFSHLYGSYIMILLAYIHMFRNFY 107


>UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla
           cristata|Rep: Cytochrome b - Pseudourostyla cristata
          Length = 393

 Score = 37.9 bits (84), Expect = 0.18
 Identities = 16/69 (23%), Positives = 34/69 (49%)
 Frame = +3

Query: 81  LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHI 260
           + +++Q+++G FL  YY     +       +  +  +G  +  +H  G    F+  YLHI
Sbjct: 42  IAIVLQVLSGFFLGWYYIPEPGLVVELREEMFNDTRFGAEVFYMHVRGVDTIFVLSYLHI 101

Query: 261 GRGIYYESF 287
            + IY +++
Sbjct: 102 LKKIYLKNY 110


>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
           1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
           Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
           cytochrome b - Triticum timopheevi (Sanduri wheat)
          Length = 207

 Score = 37.5 bits (83), Expect = 0.23
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +3

Query: 225 ASFFFICIYLHIGRGIYYESFNLKYV 302
           AS FFI +YLHI RG+YY S+  ++V
Sbjct: 23  ASMFFIVVYLHIFRGLYYASYPREFV 48


>UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep:
           Cytochrome b - Gallus gallus (Chicken)
          Length = 113

 Score = 35.5 bits (78), Expect = 0.94
 Identities = 28/103 (27%), Positives = 55/103 (53%)
 Frame = +2

Query: 53  LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 232
           +MK+R+P S + ++ N +    ++ LHS++  S L    +LP+  + L +         I
Sbjct: 1   MMKFRLPISSLPHDPNPHRPTTSHALHSRHIPSLLLRSPHLPERTIRLTHPESPRKRRLI 60

Query: 233 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLC 361
             +L+L ++RTR +L +  L+  + + +    +T+S   HRLC
Sbjct: 61  LLHLYLPSHRTRPILRLLPLQGNLKHRSNPPPHTHS---HRLC 100


>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
           rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
          Length = 112

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 395 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 511
           N ++KS IC P++ +    +NL  + CR  + N ILH+S
Sbjct: 2   NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40


>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
           apomucin, partial; n=1; Monodelphis domestica|Rep:
           PREDICTED: similar to submaxillary apomucin, partial -
           Monodelphis domestica
          Length = 745

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -2

Query: 424 IADNRFVITVAPQKDI*PQGKT 359
           +AD R  ITVAPQKDI P G T
Sbjct: 1   MADRRLAITVAPQKDICPHGNT 22


>UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus
           tetradactylus|Rep: Cytochrome b - Petrodromus
           tetradactylus (Four-toed elephant shrew)
          Length = 82

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 98  NYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL 277
           N  W I ++ LH ++ +  L S  +LP  KL + N    C  S    YL +++ RTR LL
Sbjct: 8   NPNWPIPSHALHLRHPHRILLSNPHLPGRKLRMTNPLYPCQRSLPILYLPIYSRRTRYLL 67


>UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 358

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
 Frame = +2

Query: 113 IFNNILH--SKY*NSFL*SKLYLPKCKLWLNNSNITC*WSF--IFFYLHLFTYRTRNLL* 280
           IFN +LH  + Y N  +  KLYL    L+ N S I   +SF  IFF+L +F Y +  +  
Sbjct: 281 IFNTVLHWINIYLNFTMSKKLYLKYKTLYKNISFIFSYFSFDEIFFFLLIF-YSSFFITS 339

Query: 281 IF*LKICMINWNYNFI 328
              L +C+  + YNFI
Sbjct: 340 SL-LSLCLFYYIYNFI 354


>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
           lineare|Rep: Cytochrome b - Microstomum lineare
          Length = 234

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +3

Query: 396 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 506
           +V TN LS +PYLG  L+  I GG  V   ++ RF++
Sbjct: 3   SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFS 39


>UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep:
           Cytochrome b - Halobacterium mediterranei (Haloferax
           mediterranei)
          Length = 485

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 21/161 (13%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYY---TANIEI--------------AFYRVNYICRNVNYG*IIRTL 212
           C ++ ++TG+FL +++   T++++               AF  V +I  ++ +G  IR +
Sbjct: 54  CFLLLVLTGMFLGMFFEPSTSDVKYEGSVAKFQGEEVPEAFASVLHITYDIPFGMFIRRM 113

Query: 213 HANGASFFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQI 380
           H   A  F   I LH+ R    G Y       +V                  Y LP  + 
Sbjct: 114 HHWAAHLFVASIGLHMLRVFFTGAYRNPREPNWV--VGTALAGLSMGAAYTGYALPFDEF 171

Query: 381 SFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 503
           +     +  NL ++IP +G ++     GG    +AT+ R Y
Sbjct: 172 AATATGIGYNLATSIPLVGEVIGKAFFGGEFPSSATIPRLY 212


>UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;
           n=4; Magnetospirillum|Rep: Cytochrome b subunit of the
           bc complex - Magnetospirillum magneticum (strain AMB-1 /
           ATCC 700264)
          Length = 524

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 105 TGLFLTIYYTANIEIAFYRVNYICRNVNY-G*IIRTLHANGASFFFICIYLHIGR 266
           +GL+L + Y  +   A+  + YI R   Y G +IR+LH  G+    + + LH+ R
Sbjct: 48  SGLYLFVPYDTSAVRAWNSIEYISREQWYWGGLIRSLHRYGSDAMVLTMMLHLVR 102


>UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1;
            Guillardia theta|Rep: Putative U5 snRNP-specific protein
            - Guillardia theta (Cryptomonas phi)
          Length = 1436

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
 Frame = +2

Query: 89   NNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTR 268
            N S      FNN+ HSK  + FL  K+      L+  +    C  +++ F  ++  Y  +
Sbjct: 1224 NKSGLKNFYFNNVKHSKVEDKFL--KITKLHKNLFYKSDKKKC-LNYLLFIFYI--YNWK 1278

Query: 269  NLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN-YI 445
            NL     L IC I  NY F Y+    +      L+   FL   RN K II    F N Y 
Sbjct: 1279 NLYLNEKLNIC-IKQNY-FYYSGFLYYDYNIKKLKK--FLAFFRNSKIIIIREKFINLYS 1334

Query: 446  SKLNLRGIC 472
            S+++L   C
Sbjct: 1335 SEISLSNSC 1343


>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
           falciparum|Rep: Rps17 protein - Plasmodium falciparum
          Length = 74

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = -3

Query: 186 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 43
           + F KYN  YKKL   LLCN+ +KI     E++    +   Y+ K KY
Sbjct: 21  ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65


>UniRef50_Q7M2C0 Cluster: Ubiquinol-cytochrome-c reductase (EC
           1.10.2.2) cytochrome b; n=1; Leishmania amazonensis|Rep:
           Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
           cytochrome b - Leishmania amazonensis
          Length = 255

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 30/117 (25%), Positives = 44/117 (37%)
 Frame = +3

Query: 84  CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIG 263
           CL   II  LF    Y  +I   FY +  +        +IR  H     ++F    LHI 
Sbjct: 39  CLFSMIIFVLFYM--YRTDILFYFYEILIVG-------VIRRSHICLHHYYFFFFMLHIF 89

Query: 264 RGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 434
           +     +    Y                   YVLP   +S+WG TV +N+L+ +  L
Sbjct: 90  KLHSINNIWHTYFVCGRFCNIYIYSRIGFIGYVLPCTMMSYWGLTVFSNILATVQLL 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,473,621
Number of Sequences: 1657284
Number of extensions: 7677970
Number of successful extensions: 15020
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 14362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14928
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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