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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A08
         (857 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5K671 Cluster: Reverse transcriptase; n=2; Bombyx mori...   345   7e-94
UniRef50_Q03278 Cluster: Retrovirus-related Pol polyprotein from...   126   5e-28
UniRef50_Q49P02 Cluster: Reverse transcriptase-like protein; n=1...   126   9e-28
UniRef50_O44320 Cluster: Reverse transcriptase; n=1; Hippodamia ...   123   7e-27
UniRef50_Q3C2H3 Cluster: Reverse transcriptase; n=1; Eptatretus ...   121   3e-26
UniRef50_Q76IP1 Cluster: Reverse transcriptase; n=1; Ciona intes...   121   3e-26
UniRef50_Q49P04 Cluster: Reverse transcriptase-like protein; n=2...   120   4e-26
UniRef50_Q76IP0 Cluster: Reverse transcriptase; n=1; Ciona intes...   109   9e-23
UniRef50_Q3C2G7 Cluster: Reverse transcriptase; n=1; Metacrinus ...   109   9e-23
UniRef50_Q3C2G5 Cluster: Reverse transcriptase; n=1; Procambarus...   109   1e-22
UniRef50_P16423 Cluster: Retrovirus-related Pol polyprotein from...   103   4e-21
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori...    96   9e-19
UniRef50_O44319 Cluster: Reverse transcriptase; n=1; Anurida mar...    95   2e-18
UniRef50_Q4QQD8 Cluster: Polyprotein; n=1; Schistosoma mansoni|R...    94   5e-18
UniRef50_Q03279 Cluster: Retrovirus-related Pol polyprotein from...    93   8e-18
UniRef50_Q76IN9 Cluster: Reverse transcriptase; n=1; Ciona intes...    89   2e-16
UniRef50_O44323 Cluster: Reverse transcriptase; n=1; Forficula a...    88   2e-16
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera...    87   7e-16
UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic...    83   1e-14
UniRef50_Q3C2G4 Cluster: Reverse transcriptase; n=1; Triops long...    81   4e-14
UniRef50_Q03274 Cluster: Retrovirus-related Pol polyprotein from...    80   8e-14
UniRef50_Q05118 Cluster: Retrovirus-related Pol polyprotein from...    78   3e-13
UniRef50_Q76IN6 Cluster: Reverse transcriptase; n=5; Rasborinae|...    77   8e-13
UniRef50_O44318 Cluster: Reverse transcriptase; n=1; Limulus pol...    75   2e-12
UniRef50_Q3C2H0 Cluster: Reverse transcriptase; n=3; Mauremys re...    74   4e-12
UniRef50_Q3C2H1 Cluster: Reverse transcriptase; n=1; Oryzias lat...    74   5e-12
UniRef50_Q03275 Cluster: Retrovirus-related Pol polyprotein from...    73   9e-12
UniRef50_O44321 Cluster: Reverse transcriptase; n=1; Tenebrio mo...    71   4e-11
UniRef50_Q76IN7 Cluster: Reverse transcriptase; n=1; Ciona savig...    60   7e-08
UniRef50_Q76IN8 Cluster: Reverse transcriptase; n=1; Ciona intes...    59   2e-07
UniRef50_O44324 Cluster: Reverse transcriptase; n=1; Tenebrio mo...    56   1e-06
UniRef50_Q9U8F6 Cluster: Reverse transcriptase; n=1; Nasonia vit...    56   2e-06
UniRef50_Q3C2G6 Cluster: Reverse transcriptase; n=1; Hasarius ad...    54   6e-06
UniRef50_A7SWI8 Cluster: Predicted protein; n=1; Nematostella ve...    41   0.035
UniRef50_Q1DHB5 Cluster: Putative uncharacterized protein; n=1; ...    38   0.43 
UniRef50_A2QKI9 Cluster: Putative uncharacterized protein precur...    37   0.57 
UniRef50_UPI00004991CA Cluster: hypothetical protein 202.t00004;...    37   0.75 
UniRef50_Q76IM9 Cluster: Reverse transcriptase; n=1; Ciona intes...    36   1.7  
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1...    35   2.3  
UniRef50_Q4SE62 Cluster: Chromosome undetermined SCAF14625, whol...    35   3.0  
UniRef50_Q4SDN8 Cluster: Chromosome 10 SCAF14634, whole genome s...    35   3.0  
UniRef50_Q98330 Cluster: M83 protein; n=2; Murid herpesvirus 1|R...    35   3.0  
UniRef50_A7IJE3 Cluster: Flavoprotein involved in K+ transport-l...    35   3.0  
UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian...    35   3.0  
UniRef50_Q4P656 Cluster: Putative uncharacterized protein; n=1; ...    35   3.0  
UniRef50_UPI0000E80016 Cluster: PREDICTED: hypothetical protein;...    34   4.0  
UniRef50_A7IBU8 Cluster: LigA; n=1; Xanthobacter autotrophicus P...    34   4.0  
UniRef50_Q76IN3 Cluster: Reverse transcriptase; n=142; Entamoeba...    34   4.0  
UniRef50_A1FRD4 Cluster: Outer membrane efflux protein precursor...    34   5.3  
UniRef50_UPI0000D9EC0F Cluster: PREDICTED: hypothetical protein;...    33   7.0  
UniRef50_Q6NWB3 Cluster: Splicing factor 3b, subunit 4; n=16; Eu...    33   7.0  
UniRef50_Q6A960 Cluster: Phosphoribosyltransferase; n=2; Actinom...    33   7.0  
UniRef50_Q3JTX2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_A5E0W3 Cluster: Predicted protein; n=1; Lodderomyces el...    33   7.0  
UniRef50_A4QYH2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_UPI0000F2E9EB Cluster: PREDICTED: similar to winged hel...    33   9.2  
UniRef50_Q6WKY8 Cluster: Guanine nucleotide exchange factor; n=2...    33   9.2  
UniRef50_Q0UG11 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  
UniRef50_Q0U7A0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   9.2  
UniRef50_Q3C148 Cluster: DNA repair and recombination protein; n...    33   9.2  

>UniRef50_Q5K671 Cluster: Reverse transcriptase; n=2; Bombyx mori|Rep:
            Reverse transcriptase - Bombyx mori (Silk moth)
          Length = 1114

 Score =  345 bits (849), Expect = 7e-94
 Identities = 163/164 (99%), Positives = 163/164 (99%)
 Frame = +1

Query: 13   GGKPLRQVSCVERWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIP 192
            GGKPLRQVSCVERWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIP
Sbjct: 688  GGKPLRQVSCVERWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIP 747

Query: 193  RFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATI 372
            RFQHGFV GNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATI
Sbjct: 748  RFQHGFVLGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATI 807

Query: 373  PDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWKQLRRFSR 504
            PDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWKQLRRFSR
Sbjct: 808  PDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWKQLRRFSR 851


>UniRef50_Q03278 Cluster: Retrovirus-related Pol polyprotein from
            type-1 retrotransposable element R2 (Retrovirus-related
            Pol polyprotein from type I retrotransposable element R2)
            [Includes: Reverse transcriptase (EC 2.7.7.49);
            Endonuclease]; n=1; Nasonia vitripennis|Rep:
            Retrovirus-related Pol polyprotein from type-1
            retrotransposable element R2 (Retrovirus-related Pol
            polyprotein from type I retrotransposable element R2)
            [Includes: Reverse transcriptase (EC 2.7.7.49);
            Endonuclease] - Nasonia vitripennis (Parasitic wasp)
          Length = 1025

 Score =  126 bits (305), Expect = 5e-28
 Identities = 60/154 (38%), Positives = 92/154 (59%)
 Frame = +1

Query: 13   GGKPLRQVSCVERWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIP 192
            G + + Q+   ++W+YLGV + + G + ++ +I+  L  ++ APLKPQQR+ IL   LIP
Sbjct: 615  GNQEITQLGHADQWKYLGVVYNSYGPIQVKINIAGDLQRVTAAPLKPQQRMAILGMFLIP 674

Query: 193  RFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATI 372
            RF H  V G  S+  +R  D  IRK V  WLRLP D P  Y+HA +++GGL IP+  + I
Sbjct: 675  RFIHKLVLGRTSNADVRKGDKIIRKTVRGWLRLPHDTPIGYFHAPIKEGGLGIPAFESRI 734

Query: 373  PDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRW 474
            P+L+  R   L +S    AR+    D + ++ +W
Sbjct: 735  PELLKSRIEALGASNMQTARSLLGGDWVAERKKW 768


>UniRef50_Q49P02 Cluster: Reverse transcriptase-like protein; n=1;
           Ixodes scapularis|Rep: Reverse transcriptase-like
           protein - Ixodes scapularis (Black-legged tick) (Deer
           tick)
          Length = 513

 Score =  126 bits (303), Expect = 9e-28
 Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
 Frame = +1

Query: 16  GKPLRQVSCVERWRYLGVDFEASGC-VTLEHSISSALNNISRAPLKPQQRLEILRAHLIP 192
           G PL       RW+YLGV+F  +G  V L   ++S L  +++APLKPQQRL ILR +LIP
Sbjct: 96  GIPLPACGIEARWKYLGVEFSPNGRNVPLTKDVASMLERVAKAPLKPQQRLVILRFYLIP 155

Query: 193 RFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATI 372
           R  H  V G  +   L+ LDVQIR AV +W+ LP D P  YYHA V +GGL + S    I
Sbjct: 156 RLYHRLVLGRWNRKLLKRLDVQIRDAVRKWMALPHDTPLGYYHAPVAEGGLGVGSFSTAI 215

Query: 373 PDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWK 483
           P + V+R   + +S   + R AA +  ++  L  A K
Sbjct: 216 PWMQVQRLPRMATSSSPICRQAADTYMVKTALDRAKK 252


>UniRef50_O44320 Cluster: Reverse transcriptase; n=1; Hippodamia
           convergens|Rep: Reverse transcriptase - Hippodamia
           convergens (Convergent lady beetle)
          Length = 493

 Score =  123 bits (296), Expect = 7e-27
 Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
 Frame = +1

Query: 16  GKPLRQVSCVERWRYLGVDFEASGCVTL-EHSISSALNNISRAPLKPQQRLEILRAHLIP 192
           G  L QV     W+YLG+ F   G        ++  L  ++RAPLKPQQR+ +LR  L+P
Sbjct: 65  GSWLSQVDGTTFWKYLGLQFRGCGMAGCGSDDVAECLERLTRAPLKPQQRMHLLRVFLLP 124

Query: 193 RFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATI 372
           RF H + FG ++   LR LD+++R A+   +RLP DVP  Y+HA    GGL IP +   I
Sbjct: 125 RFYHVWTFGRLNAGILRRLDIRVRNAIRTSVRLPHDVPVGYFHAPTNAGGLGIPQLSRFI 184

Query: 373 PDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWKQLRRFSRRHKDPT 522
           P L ++RF  L  S     R  A+++    K+RW  ++L     R  D T
Sbjct: 185 PLLRLKRFERLAHSSVESVRECARTEPAVAKVRWCRERLADVVDRVADGT 234


>UniRef50_Q3C2H3 Cluster: Reverse transcriptase; n=1; Eptatretus
           burgeri|Rep: Reverse transcriptase - Eptatretus burgeri
           (Inshore hagfish)
          Length = 486

 Score =  121 bits (291), Expect = 3e-26
 Identities = 63/146 (43%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
 Frame = +1

Query: 13  GGKPLRQVSCVERWRYLGVDFEASGCVTLEHS-ISSALNNISRAPLKPQQRLEILRAHLI 189
           G + L  +    + +YLG+ F   G    + S +   L N+ RAP+KPQQR+ +LR HLI
Sbjct: 66  GQQNLGVLDAASQLKYLGIQFLPRGAAPSDGSALEKGLRNLRRAPIKPQQRMFMLRDHLI 125

Query: 190 PRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRAT 369
           P+ QHG V G      LR LDVQ+R     WLRLP D P AY+HA   DGGL +P    T
Sbjct: 126 PQLQHGLVLGAARRGTLRKLDVQMRHHTRLWLRLPKDTPVAYFHARSADGGLGLPQFSVT 185

Query: 370 IPDLIVRRFGGLDSSPWSVARAAAKS 447
           IP L  RR  GL+ S     RA  ++
Sbjct: 186 IPILRERRMRGLEQSDSPYVRAVIRT 211


>UniRef50_Q76IP1 Cluster: Reverse transcriptase; n=1; Ciona
            intestinalis|Rep: Reverse transcriptase - Ciona
            intestinalis (Transparent sea squirt)
          Length = 998

 Score =  121 bits (291), Expect = 3e-26
 Identities = 69/161 (42%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
 Frame = +1

Query: 13   GGKPLRQVSCVERWRYLGVDFEASGC-VTLEHSISSALNNISRAPLKPQQRLEILRAHLI 189
            GG  +  V+    +RYLGV+  A+G  V    S++S L N+SRAPLKPQQRL IL  HL+
Sbjct: 581  GGVRIPAVAVSGSYRYLGVNISAAGMRVDAADSLASKLANLSRAPLKPQQRLYILCTHLL 640

Query: 190  PRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRAT 369
            P   H  V  + S   L+ LD  +R AV +WLRLP D PKAY+HA   DGGL +P ++  
Sbjct: 641  PSIYHQLVLSSTSKKFLKYLDRCVRVAVRRWLRLPKDTPKAYFHAKCNDGGLGVPELQRV 700

Query: 370  IPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKL-RWAWKQL 489
            IP     R+  +  S   V +AA   +  +K L RW+  +L
Sbjct: 701  IPLQKAGRWLKMTRSQDPVVQAAVGLEYFQKLLERWSTPEL 741


>UniRef50_Q49P04 Cluster: Reverse transcriptase-like protein; n=2;
           Ixodidae|Rep: Reverse transcriptase-like protein -
           Amblyomma americanum (lone star tick)
          Length = 510

 Score =  120 bits (290), Expect = 4e-26
 Identities = 60/144 (41%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
 Frame = +1

Query: 16  GKPLRQVSCVERWRYLGVDFEASGCVT--LEHSISSALNNISRAPLKPQQRLEILRAHLI 189
           GK +   +C   WRYLGV F A+G +   +   +++ L  +S APLKPQQRL +LR +L+
Sbjct: 96  GKDMTSQNCTSLWRYLGVTFSATGRIQGPIRFELAALLQRVSSAPLKPQQRLVVLRYYLM 155

Query: 190 PRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRAT 369
           PR  H    G IS   L  +D  IR  + +WL LP DVP  +++A ++ GGL I  +R T
Sbjct: 156 PRLTHRLTLGPISAKTLTAIDRTIRSNIRRWLALPLDVPMGFFYAQIEQGGLGINCLRTT 215

Query: 370 IPDLIVRRFGGLDSSPWSVARAAA 441
           IP L +RRF  +  S  S    AA
Sbjct: 216 IPSLRLRRFAKMTHSSNSACTFAA 239


>UniRef50_Q76IP0 Cluster: Reverse transcriptase; n=1; Ciona
            intestinalis|Rep: Reverse transcriptase - Ciona
            intestinalis (Transparent sea squirt)
          Length = 1104

 Score =  109 bits (262), Expect = 9e-23
 Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = +1

Query: 34   VSCVERWRYLGVDFEASGCVT-LEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGF 210
            +S  ++++YLG++ +A G        ++  L  +SRAPLKPQQRL +LR HL+P+ QHG 
Sbjct: 692  LSITQQYKYLGINIDAQGARNDAARILTEGLAELSRAPLKPQQRLYLLRVHLLPKLQHGL 751

Query: 211  VFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPDL 381
            V  + +   L  LD  +R A+ +WL LP D P A+YHA   DGGL I  +  TIP L
Sbjct: 752  VLSSCAKRALTYLDKSVRSAIRRWLTLPKDTPTAFYHAKACDGGLGITRLEHTIPIL 808


>UniRef50_Q3C2G7 Cluster: Reverse transcriptase; n=1; Metacrinus
           rotundus|Rep: Reverse transcriptase - Metacrinus
           rotundus
          Length = 492

 Score =  109 bits (262), Expect = 9e-23
 Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
 Frame = +1

Query: 1   YWIFGGKPLRQVSCVERWRYLGVDFEASGC-VTLEHSISSALNNISRAPLKPQQRLEILR 177
           Y    G+ +  +S  + ++YLG+   A G    ++  + + L N++RAPLKP QRL ILR
Sbjct: 64  YLSVDGENVPAISITKTYKYLGIQVGAHGTRAEVKEKLVAGLANLTRAPLKPFQRLHILR 123

Query: 178 AHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPS 357
             L+P   H  V   ++   L+ LD  +R A   WL+LP D P A+ HA  +DGGL+I S
Sbjct: 124 VQLMPSLTHQLVLAGVTKGYLKDLDRLVRAASRSWLKLPHDTPNAFLHANYKDGGLSIDS 183

Query: 358 VRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWKQ 486
           +  TIP L  +RFG L  S      AA +++   K++   W++
Sbjct: 184 LSLTIPFLKGKRFGKLTVSSDDTVLAATETNSF-KRMHKKWRE 225


>UniRef50_Q3C2G5 Cluster: Reverse transcriptase; n=1; Procambarus
           clarkii|Rep: Reverse transcriptase - Procambarus clarkii
           (Red swamp crayfish)
          Length = 480

 Score =  109 bits (261), Expect = 1e-22
 Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   YWIFGGKPLRQVSCVERWRYLGVDFEASGCVTLEHSI-SSALNNISRAPLKPQQRLEILR 177
           Y++ G   +  +S  + ++YLG+   A G      S+    L NI++APLKPQQRL +L+
Sbjct: 63  YYV-GDDAIGTMSVADEYKYLGILIGAGGRRLSYGSLFEDGLTNITKAPLKPQQRLYLLK 121

Query: 178 AHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPS 357
            HLIP+  H  V G+++   L  LD ++R A   WLRLP D P A+ HA V+DGGL IP 
Sbjct: 122 HHLIPKMNHRLVLGHVAKTELARLDRRLRHATRGWLRLPHDTPNAFIHADVKDGGLGIPD 181

Query: 358 VRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLR 471
              +I     +R G L  S   V  AAA     + ++R
Sbjct: 182 FATSIRLQKNKRLGALTGSADPVVVAAALLPAFQARMR 219


>UniRef50_P16423 Cluster: Retrovirus-related Pol polyprotein from
            type-2 retrotransposable element R2DM (Retrovirus-related
            Pol polyprotein from type II retrotransposable element
            R2DM) [Includes: Protease (EC 3.4.23.-); Reverse
            transcriptase (EC 2.7.7.49); Endonuclease]; n=26;
            Drosophila|Rep: Retrovirus-related Pol polyprotein from
            type-2 retrotransposable element R2DM (Retrovirus-related
            Pol polyprotein from type II retrotransposable element
            R2DM) [Includes: Protease (EC 3.4.23.-); Reverse
            transcriptase (EC 2.7.7.49); Endonuclease] - Drosophila
            melanogaster (Fruit fly)
          Length = 1057

 Score =  103 bits (248), Expect = 4e-21
 Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
 Frame = +1

Query: 13   GGKPLRQVSCVERWRYLGVDFEASGCVTLE--HSISSALNNISRAPLKPQQRLEILRAHL 186
            G   +  +   + W+YLG++F A+G V       I   L  +++APLKPQQRL  LR  L
Sbjct: 640  GSSEIPSLKRTDEWKYLGINFTATGRVRCNPAEDIGPKLQRLTKAPLKPQQRLFALRTVL 699

Query: 187  IPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRA 366
            IP+  H    G+++   LR  D  IR  V +WL LP DVP A+ HA  + GGL IPS+R 
Sbjct: 700  IPQLYHKLALGSVAIGVLRKTDKLIRYYVRRWLNLPLDVPIAFVHAPPKSGGLGIPSLRW 759

Query: 367  TIPDLIVRRFGGL 405
              P L +RR   +
Sbjct: 760  VAPMLRLRRLSNI 772


>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx
           mori|Rep: Reverse transcriptase - Bombyx mori (Silk
           moth)
          Length = 1076

 Score = 96.3 bits (229), Expect = 9e-19
 Identities = 53/96 (55%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
 Frame = +2

Query: 485 SSAGSA-VVTRIRRLGPKVALDKTQALLFHGPGRAPPLGAHXXXXXXXXXXXXXXXXXXX 661
           ++AG A VV RIRRLG  VAL+K++AL FHGP RAPP+  H                   
Sbjct: 708 ATAGVALVVGRIRRLGLDVALNKSEALWFHGPRRAPPVDTHIVVGGVRIGVGVQLKYLGL 767

Query: 662 XELDGRWNFRAHFAKLGPRLMATAGSLXRLLPNVGG 769
             LD RW FRAHFA+L PRLM TAGSL RLLPN+GG
Sbjct: 768 V-LDSRWAFRAHFAELVPRLMGTAGSLSRLLPNIGG 802


>UniRef50_O44319 Cluster: Reverse transcriptase; n=1; Anurida
            maritima|Rep: Reverse transcriptase - Anurida maritima
          Length = 1151

 Score = 95.1 bits (226), Expect = 2e-18
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
 Frame = +1

Query: 13   GGKPLRQVSCVERWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIP 192
            GG  +  V   E W+YLG      G      S+ + L  I+++PLKPQQ+L ++R HL+P
Sbjct: 726  GGGFMTPVGVTETWKYLGAYLGQIGIQPARLSLQTFLERIAKSPLKPQQKLYLIRVHLLP 785

Query: 193  RFQHGFVFGNISDDRLRMLDVQIRKAV-GQ--WLRLPADVPKAYYHAAVQDGGLAIPSVR 363
            +  +  V   I    L  LD  +R A+ G+   L LP  VP A+++A + +GGL +  +R
Sbjct: 786  KLIYPLVMAPIRASMLNKLDRMVRVALTGKDGILHLPQSVPSAFFYAPIGEGGLGLMELR 845

Query: 364  ATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAWKQLRR 495
             +IP ++  RF  + +S     RAAAK      ++  A + LR+
Sbjct: 846  TSIPAMVKARFERMMNSTCHHVRAAAKGAANSNRIALANRFLRK 889


>UniRef50_Q4QQD8 Cluster: Polyprotein; n=1; Schistosoma mansoni|Rep:
            Polyprotein - Schistosoma mansoni (Blood fluke)
          Length = 1144

 Score = 93.9 bits (223), Expect = 5e-18
 Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
 Frame = +1

Query: 16   GKPLRQVSCVERWRYLGVDFEASGCVTLEHS--ISSALNNISRAPLKPQQRLEILRAHLI 189
            G  +  +S  + + YLG+ F   G   + H   +++ L  IS APLKPQQR++IL+ +L+
Sbjct: 731  GMRIPPLSAADTFDYLGIKFNFKGRCPVAHIDLLNNYLTEISCAPLKPQQRMKILKDNLL 790

Query: 190  PRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRAT 369
            PR  +    G +    L+ +D  I  A+ +WLRLP+D P AY+H+ V  GGL I  + ++
Sbjct: 791  PRLLYPLTLGIVHLKTLKSMDRNIHTAIRKWLRLPSDTPLAYFHSPVAAGGLGILHLSSS 850

Query: 370  IPDLIVRRFGGLDSSP 417
            +P    +R   L SSP
Sbjct: 851  VPFHRRKRLETLLSSP 866


>UniRef50_Q03279 Cluster: Retrovirus-related Pol polyprotein from
           type-1 retrotransposable element R2 (Retrovirus-related
           Pol polyprotein from type I retrotransposable element
           R2) [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease]; n=1; Bradysia coprophila|Rep:
           Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] - Sciara coprophila (Fungus gnat)
          Length = 869

 Score = 93.1 bits (221), Expect = 8e-18
 Identities = 44/117 (37%), Positives = 71/117 (60%)
 Frame = +1

Query: 25  LRQVSCVERWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQH 204
           L+ ++  + W+YLGV +  SG    + S+   L+ +++ PLKPQQR+ +L+  +IP+  +
Sbjct: 459 LKPLTISDLWKYLGVVYTTSGPEVAKVSMDDDLSKLTKGPLKPQQRIHLLKTFVIPKHLN 518

Query: 205 GFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIP 375
             V    +   L  +D+ IRK V +WLRLP DVP A+ +A V+ GG  IP ++  IP
Sbjct: 519 RLVLSRTTATGLCKMDLLIRKYVRRWLRLPGDVPVAFLYAPVKAGGKGIPCLKQWIP 575


>UniRef50_Q76IN9 Cluster: Reverse transcriptase; n=1; Ciona
           intestinalis|Rep: Reverse transcriptase - Ciona
           intestinalis (Transparent sea squirt)
          Length = 779

 Score = 88.6 bits (210), Expect = 2e-16
 Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
 Frame = +1

Query: 52  WRYLGVDFEASGC-VTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFGNIS 228
           ++YLGV   A       +  + S L   + APLKPQQR+ ILR +++PR  H   F N +
Sbjct: 405 YKYLGVRVGAGDTRAECKEKLMSDLKETTEAPLKPQQRIFILRNYILPRSLHILTFTNTT 464

Query: 229 DDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLD 408
              L+ LD  IR  V +WL+LP D P  Y ++  +DGGL +P + + +P L +RR    +
Sbjct: 465 ARLLKQLDSAIRIHVRRWLKLPKDTPLGYLYSDYKDGGLGVPRLLSRVPLLRIRRMAKYN 524

Query: 409 SS--PWSVA 429
           +S  P +VA
Sbjct: 525 TSEDPTTVA 533


>UniRef50_O44323 Cluster: Reverse transcriptase; n=1; Forficula
           auricularia|Rep: Reverse transcriptase - Forficula
           auricularia (European earwig)
          Length = 1033

 Score = 88.2 bits (209), Expect = 2e-16
 Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
 Frame = +1

Query: 52  WRYLGVDFEASG-CV--TLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFGN 222
           + YLGV F A G C   T+ H +   ++ +++APLKPQQRL  LR  ++P   H    G 
Sbjct: 628 FHYLGVPFTAEGRCRDDTIAH-LKRKIDVLTKAPLKPQQRLFALRVVILPSCYHILTLGG 686

Query: 223 ISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIP 375
            +   L+ +D+ +R A  +W  LP D P AY+HA+ +DGGL +PS+R  IP
Sbjct: 687 SNLSLLKKIDLMVRAAGRKWCCLPKDTPNAYFHASSRDGGLGLPSMRWLIP 737


>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9;
           Obtectomera|Rep: Reverse transcriptase - Papilio xuthus
          Length = 1053

 Score = 86.6 bits (205), Expect = 7e-16
 Identities = 45/92 (48%), Positives = 53/92 (57%)
 Frame = +2

Query: 503 VVTRIRRLGPKVALDKTQALLFHGPGRAPPLGAHXXXXXXXXXXXXXXXXXXXXELDGRW 682
           VV RIR LG +VAL K++AL FHGP   PP GAH                     LDGRW
Sbjct: 693 VVGRIRALGLEVALQKSEALYFHGPRSRPPPGAHIVVGGVNINIQSHIRYLGLM-LDGRW 751

Query: 683 NFRAHFAKLGPRLMATAGSLXRLLPNVGGSRS 778
            F  HF +LGP+LM TA +L  LLPNVGG ++
Sbjct: 752 TFEGHFRQLGPKLMRTAAALGSLLPNVGGPKA 783


>UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical
            115 kDa protein in type I retrotransposable element R1DM
            (ORF 2), partial; n=1; Tribolium castaneum|Rep:
            PREDICTED: similar to Hypothetical 115 kDa protein in
            type I retrotransposable element R1DM (ORF 2), partial -
            Tribolium castaneum
          Length = 2033

 Score = 82.6 bits (195), Expect = 1e-14
 Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
 Frame = +1

Query: 22   PLRQVSCVERWRYLGVDFEASGCVTLE-HSISSALNNISRAPLKPQQRLEILRAHLIPRF 198
            P+  V  ++ ++YLG++F  +G      H++S  LNN+ RAPLKP Q+   +R ++IPR 
Sbjct: 1809 PIPNVDALDAFKYLGLEFGHNGVERPTIHNLSVWLNNLRRAPLKPDQKCLFIRQYVIPRL 1868

Query: 199  QHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPD 378
             +G     ++   LR  D  IR+ +  +  L    P +  HA+V DGGL I  +R  IP 
Sbjct: 1869 LYGMQNPQVTSRVLREADRLIRRHLKTYCHLNVHTPDSLIHASVSDGGLGIMELRKAIPR 1928

Query: 379  LIVRRFGG-LDSSPWSVARAAAKSDKIR 459
            + + R    L+ +  S   +  +S+++R
Sbjct: 1929 IFLGRLVKLLNKNKNSYLSSVLQSNRVR 1956


>UniRef50_Q3C2G4 Cluster: Reverse transcriptase; n=1; Triops
           longicaudatus|Rep: Reverse transcriptase - Triops
           longicaudatus
          Length = 491

 Score = 81.0 bits (191), Expect = 4e-14
 Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
 Frame = +1

Query: 19  KPLRQVSCVERWRYLGVDFEASGCVTLEHSISS---ALNNISRAPLKPQQRLEILRAHLI 189
           +P+R +   E+ +YLG+ +   G V    S+S    AL ++ +APLKPQQ++ +LR HLI
Sbjct: 72  EPIRLLGVNEQCKYLGIHYTPLGAVDTRASVSKLRLALTSLMKAPLKPQQKVVMLRMHLI 131

Query: 190 PRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAI 351
           PRF H F +       L  LD  +R+ +   L+LP  +   +++  +++GGL I
Sbjct: 132 PRFIHTFTYSECYPKLLSQLDRLVRRWLKTALKLPTSLSSDFFYLPIKEGGLGI 185


>UniRef50_Q03274 Cluster: Retrovirus-related Pol polyprotein from
           type-1 retrotransposable element R2 (Retrovirus-related
           Pol polyprotein from type I retrotransposable element
           R2) [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease]; n=1; Popillia japonica|Rep:
           Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] - Popillia japonica (Japanese beetle)
          Length = 711

 Score = 79.8 bits (188), Expect = 8e-14
 Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
 Frame = +1

Query: 43  VERWRYLGVDFEASGCVT-LEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFG 219
           ++ +RYLG  F  SG      +++S  L  +  APLKP+Q+L ++R H++P+  +G    
Sbjct: 313 MQTFRYLGHFFGLSGAAKPTVYNLSRWLKCVEAAPLKPEQKLSLIREHVVPKLLYGLQNP 372

Query: 220 NISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFG 399
           +++   LR  D  IR  V + L L    P   ++A V+DGGL +  +R +IP +++ R  
Sbjct: 373 SVTARTLRDADKLIRTTVKRCLHLHLHTPNQCFYARVRDGGLGLTDLRRSIPRIMLDRIN 432

Query: 400 GLDSS-PWSVARAAAKS-DKIRKKL 468
              SS P +VA  +  S D +R +L
Sbjct: 433 ARRSSDPMAVALFSCPSFDHLRGRL 457


>UniRef50_Q05118 Cluster: Retrovirus-related Pol polyprotein from
           type-1 retrotransposable element R2 (Retrovirus-related
           Pol polyprotein from type I retrotransposable element
           R2) [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease]; n=2; Popillia japonica|Rep:
           Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] - Popillia japonica (Japanese beetle)
          Length = 606

 Score = 77.8 bits (183), Expect = 3e-13
 Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
 Frame = +1

Query: 16  GKPLRQVSCVERWRYLGVDFEASGCVT-LEHSISSALNNISRAPLKPQQRLEILRAHLIP 192
           G+ ++ +  +  ++YLG+ F ++G      ++++  L N+ +APLKP Q+  IL+ HL+P
Sbjct: 189 GRYIKPLGGINTFKYLGLTFSSTGVAKPTVYNLTRWLRNLEKAPLKPNQKFYILKTHLLP 248

Query: 193 RFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATI 372
           R  +G     ++   L+  D   R+   +   L       + HA ++DGGL +  +R  I
Sbjct: 249 RLFYGLQSPGVTAGILQECDRLARRTTRKIFHLNVHTGSQFLHARIRDGGLGLVQMRYRI 308

Query: 373 PDLIVRRFGGL----DSSPWS 423
           P ++ +R G L    D++ WS
Sbjct: 309 PCILSKRLGSLKQGNDTTNWS 329


>UniRef50_Q76IN6 Cluster: Reverse transcriptase; n=5; Rasborinae|Rep:
            Reverse transcriptase - Danio rerio (Zebrafish)
            (Brachydanio rerio)
          Length = 1193

 Score = 76.6 bits (180), Expect = 8e-13
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
 Frame = +1

Query: 4    WIFGGKPLRQVSCVERWRYLGVDFEASGCVT---LEHSISSALNNISRAPLKPQQRLEIL 174
            W+ GGK L+  +     +YLGV       +    L  ++      I ++ LKP Q++ IL
Sbjct: 750  WVLGGKALQLTNIENSIKYLGVKVNPWAGIEKPDLTVALDRWCKRIGKSLLKPSQKVYIL 809

Query: 175  RAHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIP 354
                IPR  +    G   D  L+ LD  IRKAV +WL LP        +A   +GGL I 
Sbjct: 810  NQFAIPRLFYLADHGGAGDVMLQNLDGTIRKAVKKWLHLPPSTCNGLLYARNCNGGLGIC 869

Query: 355  SVRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAW 480
             +   IP +  RR   L +S   + +A  +  ++ +K + AW
Sbjct: 870  KLTRHIPSMQARRMFRLANSSDPLMKAMMRGSRVEQKFKKAW 911


>UniRef50_O44318 Cluster: Reverse transcriptase; n=1; Limulus
            polyphemus|Rep: Reverse transcriptase - Limulus
            polyphemus (Atlantic horseshoe crab)
          Length = 1168

 Score = 75.4 bits (177), Expect = 2e-12
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
 Frame = +1

Query: 4    WIFGGKPLRQVSCVERWRYLGVD---FEASGCVTLEHSISSALNNISRAPLKPQQRLEIL 174
            W+  G+ L  +   + +RYLG     +       ++ ++   + NI+ +PLKP QR++IL
Sbjct: 737  WLVNGETLPMIGPEQTYRYLGASICPWTGINSGPVKPTLEKWIANITESPLKPHQRVDIL 796

Query: 175  RAHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIP 354
              + +PR  +    G ++   L+ LD  +++AV +W  LPA       ++  +DGGLA+ 
Sbjct: 797  CKYALPRLFYQLELGTLNFKELKELDSMVKQAVKRWCHLPACTADGLLYSRHRDGGLAVV 856

Query: 355  SVRATIPDLIVRRFGGLDSSPWSVARAAAKSD 450
             + + +P L ++    L  S   V  + A+SD
Sbjct: 857  KLESLVPCLKIKTNLRLVHSTDPVISSLAESD 888


>UniRef50_Q3C2H0 Cluster: Reverse transcriptase; n=3; Mauremys
           reevesii|Rep: Reverse transcriptase - Chinemys reevesii
           (Reeve's turtle)
          Length = 535

 Score = 74.1 bits (174), Expect = 4e-12
 Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
 Frame = +1

Query: 4   WIFGGKPLRQVSCVERWRYLGVDFE---ASGCVTLEHSISSALNNISRAPLKPQQRLEIL 174
           W  G   L  +   E  +YLGV  +         L   + + L  I+RAPLKP  +L +L
Sbjct: 61  WKIGDDTLNMIIPGESEKYLGVKVDPWIGFAKPALSEKLDTWLERINRAPLKPSPKLAML 120

Query: 175 RAHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIP 354
               + R  +     +     L  LD +IR+AV +WL LPA+    + +A  +DGGL + 
Sbjct: 121 NTFTVSRVIYLADHTDCKIAHLSTLDDKIRRAVKEWLHLPANTCNGFLYARSRDGGLGVT 180

Query: 355 SVRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWAW 480
            + + IP +  RR   +  S     R  A ++ I  + R  W
Sbjct: 181 RLASLIPSIQARRLHRIAHSKDETIRCIALANDIESEYRKLW 222


>UniRef50_Q3C2H1 Cluster: Reverse transcriptase; n=1; Oryzias
           latipes|Rep: Reverse transcriptase - Oryzias latipes
           (Medaka fish) (Japanese ricefish)
          Length = 512

 Score = 73.7 bits (173), Expect = 5e-12
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
 Frame = +1

Query: 4   WIFGGKPLRQVSCVERWRYLGVDFEASGCVT---LEHSISSALNNISRAPLKPQQRLEIL 174
           W   G P+  +   E  RYLGV       V    L  ++ + +  IS APLKP QR+ +L
Sbjct: 57  WEICGSPIHMIPPGESVRYLGVQVGPGRGVMEPDLIPTVHTWIERISEAPLKPSQRMRVL 116

Query: 175 RAHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIP 354
            +  +PR  +    G ++  +L  +D  +RKAV +WL L         ++  +DGGL + 
Sbjct: 117 NSFALPRIIYQADLGKVTVTKLAQIDGIVRKAVKKWLHLSPSTCNGLLYSRNRDGGLGLL 176

Query: 355 SVRATIPDLIVRRFGGLDSSP--WS---VARAAAKSD 450
            +   IP +  +R   +  SP  W+    + + +KSD
Sbjct: 177 KLERLIPSVRTKRIYRMSRSPDIWTRRMTSHSVSKSD 213


>UniRef50_Q03275 Cluster: Retrovirus-related Pol polyprotein from
           type-1 retrotransposable element R2 (Retrovirus-related
           Pol polyprotein from type I retrotransposable element
           R2) [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease]; n=1; Popillia japonica|Rep:
           Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] - Popillia japonica (Japanese beetle)
          Length = 482

 Score = 72.9 bits (171), Expect = 9e-12
 Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
 Frame = +1

Query: 13  GGKPLRQVSCVERWRYLGVDFEASGCVTLE-HSISSALNNISRAPLKPQQRLEILRAHLI 189
           GGK + Q++  + ++YLG  +  SG V      + + L  +  APLKP Q+L ++R H++
Sbjct: 64  GGKAIPQLTPDDYFKYLGSRYNFSGQVRPSVELLKTQLARVQSAPLKPAQKLTMIRDHVV 123

Query: 190 PRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRAT 369
            RF        ++   L+  D  +R +V + L L    P AY HA +++GGL I S+RA 
Sbjct: 124 ARFLSCLQSVRVTLKALKDADRLVRLSVRKVLHLNKSSPDAYIHAPIREGGLGIISLRAH 183

Query: 370 IPDLIVRR 393
           IP ++  R
Sbjct: 184 IPAIMRSR 191


>UniRef50_O44321 Cluster: Reverse transcriptase; n=1; Tenebrio
           molitor|Rep: Reverse transcriptase - Tenebrio molitor
           (Yellow mealworm)
          Length = 469

 Score = 70.9 bits (166), Expect = 4e-11
 Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
 Frame = +1

Query: 19  KPLRQVSCVERWRYLGVDFEASGCVTLE-HSISSALNNISRAPLKPQQRLEILRAHLIPR 195
           +P++ +   + ++YLG  F  +G        +S  L  I +APLKPQQ++ I++ +L+P 
Sbjct: 66  EPIKPIEVGKAFKYLGQQFTCTGSTNCSTKDLSEQLLRIKKAPLKPQQKINIIKTYLMPA 125

Query: 196 FQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIP 375
           + H      ++   LR +D +IR  V   L LP  +     +A  + GGL + S    IP
Sbjct: 126 YIHSMQNPAVNKKILREVDRKIRMVVKGILHLPLHLSNTAIYAPAKMGGLGMFSFSRKIP 185

Query: 376 DLIVRRFGGL 405
            ++++R   L
Sbjct: 186 IIVLKRLNNL 195


>UniRef50_Q76IN7 Cluster: Reverse transcriptase; n=1; Ciona
           savignyi|Rep: Reverse transcriptase - Ciona savignyi
           (Pacific transparent sea squirt)
          Length = 445

 Score = 60.1 bits (139), Expect = 7e-08
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +1

Query: 55  RYLGVDFEASGCVTLE-HSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFGNISD 231
           ++LG+     G   L+ ++IS AL  +  A LKPQQ++ +L+ HLIPR+++       + 
Sbjct: 49  KFLGIMIGPHGSCRLQRNTISEALKRLMGAKLKPQQKIYMLKNHLIPRWRYSLSISEQTQ 108

Query: 232 DRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSV 360
             L  +D ++R+ V + L  P  +   + H   ++GGL I S+
Sbjct: 109 QTLYWVDREVRRTVKKILHAPGCLSDNFIHLDSRNGGLGICSM 151


>UniRef50_Q76IN8 Cluster: Reverse transcriptase; n=1; Ciona
           intestinalis|Rep: Reverse transcriptase - Ciona
           intestinalis (Transparent sea squirt)
          Length = 806

 Score = 58.8 bits (136), Expect = 2e-07
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = +1

Query: 55  RYLGVDFEASG-CVTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFGNISD 231
           RYLG+ F   G C      I  +L  ++ + LKP+Q++ +LR+ LIPR+++      ++ 
Sbjct: 661 RYLGIHFGMVGSCRIRRREIRESLLRLASSALKPEQKVFMLRSFLIPRWRYSVTLTRVTV 720

Query: 232 DRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIP 354
             L  +D  +R  V   L  P ++   + H ++  GGL IP
Sbjct: 721 SFLSWIDRVVRMRVRAILHAPHNLSSEWLHLSIAKGGLGIP 761


>UniRef50_O44324 Cluster: Reverse transcriptase; n=1; Tenebrio
           molitor|Rep: Reverse transcriptase - Tenebrio molitor
           (Yellow mealworm)
          Length = 488

 Score = 56.0 bits (129), Expect = 1e-06
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
 Frame = +1

Query: 1   YWIFGGKPLRQVSCVERWRYLGVDFEASGC--VTLEH-----------SISSALNNISRA 141
           Y    G  +RQV+  + ++YLG  F   G   ++LE             ++S +NN+ +A
Sbjct: 60  YSRLNGAHIRQVAIGDVFKYLGNHFAFDGVSDISLEELNSQINNLMKAPLNSQINNLMKA 119

Query: 142 PLKPQQRLEILR-AHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYY 318
           PLKP Q+ +ILR       + H     ++S+  LR  D +I++AV   L LP  +  +  
Sbjct: 120 PLKPWQKFKILRQTSDTIGWIHCLQSPSVSNKVLREADRKIKRAVKSILHLPVTIADSSI 179

Query: 319 HAAVQDGGLAIPSVRATIPDLIVRRFGGL 405
           +A+ +DGGL +      IP ++  R+  L
Sbjct: 180 YASQRDGGLGVFCFSRKIPVILRSRWESL 208


>UniRef50_Q9U8F6 Cluster: Reverse transcriptase; n=1; Nasonia
            vitripennis|Rep: Reverse transcriptase - Nasonia
            vitripennis (Parasitic wasp)
          Length = 1265

 Score = 55.6 bits (128), Expect = 2e-06
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
 Frame = +1

Query: 16   GKPLRQVSCVERWRYLGVDFEA-SGCVTLEHS--ISSALNNISRAPLKPQQRLEILRAHL 186
            G  +  +S  E ++YLG       G +    S      ++ + R PLKP Q++++L+ ++
Sbjct: 852  GNTVPSISPSETFKYLGAKVSPWKGLLEGFESDAFREVISRVQRLPLKPMQKVDLLQMYI 911

Query: 187  IPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRA 366
             PR+ +G +    +   L+ +D  IR  + + L LP  V  ++ +   + GGL +  V  
Sbjct: 912  FPRYTYGLITSPPAKAVLKTIDRIIRTRIKEILHLPESVSSSFLYTPRKQGGLGLLEVEK 971

Query: 367  TIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLR 471
             +    +R       S   V RAA  S+    +L+
Sbjct: 972  MVLIPALRNGLRARQSHDPVTRAAMNSNAADDRLK 1006


>UniRef50_Q3C2G6 Cluster: Reverse transcriptase; n=1; Hasarius
           adansoni|Rep: Reverse transcriptase - Hasarius adansoni
          Length = 484

 Score = 53.6 bits (123), Expect = 6e-06
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
 Frame = +1

Query: 7   IFGGKPLRQVSCVERWRYLGVDFE---ASGCVTLEHSISSALNNISRAPLKPQQRLEILR 177
           IFGG  +  +   +  RYLG+ +        + L  +   AL  +  A LKP Q+L + +
Sbjct: 62  IFGGA-IPGLRSDQSLRYLGISYSPWRGFDALDLPANFEDALGRVKGAALKPYQKLHLWQ 120

Query: 178 AHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPS 357
           A++ P F H           L  LDV +R  V     LP  +     +   +DGGL +  
Sbjct: 121 AYIQPHFLHQLALAMPPRGALERLDVAVRAMVKSIFHLPRCITDGVLYCRPRDGGLGLQR 180

Query: 358 VRATIP 375
           +   +P
Sbjct: 181 LSQLVP 186


>UniRef50_A7SWI8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 182

 Score = 41.1 bits (92), Expect = 0.035
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +1

Query: 13  GGKPLRQVSCVERWRYLGVDFEASGCVTLEHSI-SSALNNISRAPLKPQQRL 165
           GGK +R ++  E  +YL +   A G    E+ +   AL N+SRA LKPQQRL
Sbjct: 27  GGK-IRSLAANETNKYLSISIGAQGAKAAEYKVLKEALYNLSRARLKPQQRL 77


>UniRef50_Q1DHB5 Cluster: Putative uncharacterized protein; n=1;
            Coccidioides immitis|Rep: Putative uncharacterized
            protein - Coccidioides immitis
          Length = 2231

 Score = 37.5 bits (83), Expect = 0.43
 Identities = 25/91 (27%), Positives = 37/91 (40%)
 Frame = -2

Query: 775  SGPPDVWKQPXQRAGRRHQSRAQLRKVSAEVPPTIQFEAEVPKTGHPDPDADASDHEVGT 596
            S P D W  P  +  +  +S+A +      V P    E E   T  P+P  +  D    T
Sbjct: 773  SQPVDNWFTPAPKKKKGKKSKAPVEPDPPPVEPEPVPEPEPEPTPAPEPVIEQVDDWEAT 832

Query: 595  QRRRSSRPVKQQGLGFVERHLRSQPSDPCDD 503
                + +  K++G G VE  L   P DP  +
Sbjct: 833  ATISTKKSKKKKGKGVVEEPLPPPPPDPAPE 863


>UniRef50_A2QKI9 Cluster: Putative uncharacterized protein
           precursor; n=1; Aspergillus niger|Rep: Putative
           uncharacterized protein precursor - Aspergillus niger
          Length = 201

 Score = 37.1 bits (82), Expect = 0.57
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = -2

Query: 391 ASQ*GPGWSLAPMGSLSRRPELRRDNMPWA----HPPVALATVRLLSGFGHRAFSIGHPR 224
           AS  GP  S  P     + P+  R+ +PW     HPP    T+   + F H+A S+  PR
Sbjct: 78  ASFYGPSSSGIPSPLKHKIPQCSRNTLPWTRKKIHPPGTYNTINKQAWFMHQAHSLARPR 137

Query: 223 -CFQ-TQNRAGISESDELSKS 167
            C      R G+ E++  +K+
Sbjct: 138 ICSSWASARNGVRENETSTKT 158


>UniRef50_UPI00004991CA Cluster: hypothetical protein 202.t00004;
           n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 202.t00004 - Entamoeba histolytica HM-1:IMSS
          Length = 410

 Score = 36.7 bits (81), Expect = 0.75
 Identities = 20/92 (21%), Positives = 42/92 (45%)
 Frame = +1

Query: 88  CVTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFGNISDDRLRMLDVQIRK 267
           C  + + +SS L++++         +  +   +I + ++GF         L  +D QIRK
Sbjct: 219 CTRILNDVSSILSSLNTMKYSILNTIRKINNDIISKLRYGFSIVKYKLGELEKIDKQIRK 278

Query: 268 AVGQWLRLPADVPKAYYHAAVQDGGLAIPSVR 363
            + Q      ++PK+  +  + + GL + S R
Sbjct: 279 LLIQLQLYSRNIPKSRLYVKINELGLGLMSAR 310


>UniRef50_Q76IM9 Cluster: Reverse transcriptase; n=1; Ciona
            intestinalis|Rep: Reverse transcriptase - Ciona
            intestinalis (Transparent sea squirt)
          Length = 1540

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
 Frame = +1

Query: 145  LKPQQRLEILRAHLIPRFQHGFVFGNISDDRLRMLDVQIRKAVGQWLRLPADVPKAYYHA 324
            L P Q+L  L+  L+P          I+   L  LD ++R+ +    RL     +A +H 
Sbjct: 1117 LTPHQKLIALKRFLLPSLSFHLRVRPIARSELIALDRRVRECLRVAFRLTKPSCQAVFHT 1176

Query: 325  AVQDGGLAIPSVRATIPDL-IVRRFGGLDSSPWSVARAAAKSDKI 456
                 GL +PSV +    L I + F  L S   +V+  A+   K+
Sbjct: 1177 PTDMDGLGVPSVCSESSILTIAQGFKVLTSPDGTVSATASARVKL 1221


>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
           Drosophila melanogaster|Rep: Endonuclease/reverse
           transcriptase - Drosophila melanogaster (Fruit fly)
          Length = 989

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 668 LDGRWNFRAHFAKLGPRLMATAGSLXRLLPNVGGSR 775
           +D R +F+AH      +   TA +L R++PNVGG R
Sbjct: 724 IDRRLSFKAHARYASKKAAMTAAALARIMPNVGGPR 759


>UniRef50_Q4SE62 Cluster: Chromosome undetermined SCAF14625, whole
           genome shotgun sequence; n=7; Euteleostomi|Rep:
           Chromosome undetermined SCAF14625, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 496

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 17/35 (48%), Positives = 17/35 (48%)
 Frame = -3

Query: 813 PXHPPIRGGAPPDRDPPTFGSSRXKEPAVAISRGP 709
           P  PP RGGAPP   PP    SR   P    SR P
Sbjct: 277 PPPPPGRGGAPPPPPPPPARGSRGAPPPPPPSRAP 311


>UniRef50_Q4SDN8 Cluster: Chromosome 10 SCAF14634, whole genome
            shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome 10 SCAF14634, whole genome shotgun sequence -
            Tetraodon nigroviridis (Green puffer)
          Length = 1322

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
 Frame = -2

Query: 664  EAEVPKTGHPDPDADASDHEVGTQR-RRSSRPVKQQGLGFVERHLRSQPSDPCDDG*TCG 488
            EA   + GH   +  A D   G +R +R+ +P  ++   FV+R  R+   DP   G    
Sbjct: 1054 EAGGQRDGHQRAEEVAKDQGRGAERGQRAPQPAGEEAGQFVQRRRRTSGEDPDSAGRGSD 1113

Query: 487  AVSRPTAVSYESYQIWRRLLPLTMVTSRAPRNASQ*GPG-WSLAPMGSLSRRPELRRD 317
            +      VS++       L P + V    P      GPG W+L P       P LRRD
Sbjct: 1114 SAEEEGEVSWDGGA--GVLGPGSWVLGPGPWVL---GPGSWALGPGPDACSCPPLRRD 1166


>UniRef50_Q98330 Cluster: M83 protein; n=2; Murid herpesvirus 1|Rep:
           M83 protein - Murid herpesvirus 1 (Murine
           cytomegalovirus)
          Length = 807

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 769 PPDVWKQPXQRAGRRHQSRAQLRKVSAEVPPTIQFEAEVPKTGHPDPDADASDHEVG 599
           PP   +QP  RA R  +        + E+ P  + +      G  DPDADA   +VG
Sbjct: 474 PPQQQRQPSPRANRPAEEDEDAAVFAGEIDPDAEDDDAAVFAGEIDPDADADAMDVG 530


>UniRef50_A7IJE3 Cluster: Flavoprotein involved in K+ transport-like
           protein; n=1; Xanthobacter autotrophicus Py2|Rep:
           Flavoprotein involved in K+ transport-like protein -
           Xanthobacter sp. (strain Py2)
          Length = 219

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 325 RRDNMP-WAHPPVALATVRLLSGFGHRAFSIGHP 227
           RRD +P WAHPP A A ++LL G  H A+ +  P
Sbjct: 120 RRDGLPEWAHPPDAAALLKLLVG-PHEAYGLETP 152


>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
            thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1289

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 813  PXHPPIRGGAPPDRDPPTFGSSRXKEP 733
            P  PP+ GGAPP   PP FG ++   P
Sbjct: 1052 PPPPPMHGGAPPPPPPPMFGGAQPPPP 1078


>UniRef50_Q4P656 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1424

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 24/109 (22%), Positives = 44/109 (40%)
 Frame = -2

Query: 763 DVWKQPXQRAGRRHQSRAQLRKVSAEVPPTIQFEAEVPKTGHPDPDADASDHEVGTQRRR 584
           D+W++  Q   R+HQ+R  +R+ +AE+   + F A++      +  A     + GT    
Sbjct: 633 DIWRKHEQAFQRKHQNRTVIRE-AAELDIGVTFVAQIDNASSQNSSAPVQSGQAGTPATT 691

Query: 583 SSRPVKQQGLGFVERHLRSQPSDPCDDG*TCGAVSRPTAVSYESYQIWR 437
            + P    G    +    +  +DP     T     RP   +   Y + R
Sbjct: 692 HTVPGDDLGSNLADAAHCALENDPNFLARTNNICIRPRGQTKPFYHVSR 740


>UniRef50_UPI0000E80016 Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 199

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -1

Query: 779 LIGTPRRLEAAGSKSRPSPSVEGPTSQSERGSSTDHPVRGRGT 651
           L G P  L AA S  R +P  EG  ++ ERG+   H  RG G+
Sbjct: 103 LRGRPADLAAARSGERGAPGPEGRYNRGERGAPAAHRARGDGS 145


>UniRef50_A7IBU8 Cluster: LigA; n=1; Xanthobacter autotrophicus
           Py2|Rep: LigA - Xanthobacter sp. (strain Py2)
          Length = 467

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
 Frame = -2

Query: 628 DADASDHEVGTQRRRSSRPVKQQGLGFVERHLRSQPSDPCDDG*TCGAVS--RPTAVSYE 455
           DADA    VG QR R+ RP  + G    +RH R +  +   D   CG VS  RP A    
Sbjct: 345 DADAM---VG-QRLRAGRPRLRVGTRQADRHRRGRTPERRQDHSACGLVSATRPGAGQPG 400

Query: 454 SYQIWRRLLPLTMVTSRAPRNASQ*GPGWSLAPMGSLSRRPELR 323
              + RR+L    V  R  R+A   GP  +L       RR   R
Sbjct: 401 GPPV-RRILHTLGVGGRCRRDALDAGPATALPAAHHEPRRQGAR 443


>UniRef50_Q76IN3 Cluster: Reverse transcriptase; n=142; Entamoeba
           histolytica|Rep: Reverse transcriptase - Entamoeba
           histolytica
          Length = 801

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 20/92 (21%), Positives = 42/92 (45%)
 Frame = +1

Query: 88  CVTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVFGNISDDRLRMLDVQIRK 267
           C  + + +SS L++++         +  + + +I + ++GF         L  +D QIRK
Sbjct: 397 CTRILNDVSSILSSLNTMKYSSLNTIRKINSDIISKLRYGFCIVPWKLGELEKIDKQIRK 456

Query: 268 AVGQWLRLPADVPKAYYHAAVQDGGLAIPSVR 363
           ++ Q      ++PK+       + GL + S R
Sbjct: 457 SLIQLQLYSRNIPKSRLFVKKNELGLGLMSPR 488


>UniRef50_A1FRD4 Cluster: Outer membrane efflux protein precursor;
           n=1; Stenotrophomonas maltophilia R551-3|Rep: Outer
           membrane efflux protein precursor - Stenotrophomonas
           maltophilia R551-3
          Length = 510

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 22/79 (27%), Positives = 36/79 (45%)
 Frame = +1

Query: 298 DVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKLRWA 477
           DV KA        G + +   RA +P L +  FGG+ +   S+  ++AK      +L+W 
Sbjct: 306 DVAKADARLRASLGNVVLAE-RAHLPRLTLNVFGGILAPFGSLGDSSAKRFSAGPELQWE 364

Query: 478 WKQLRRFSRRHKDPTAGTE 534
           W    R   R +   AG++
Sbjct: 365 WLSFGRKKAREEAARAGSD 383


>UniRef50_UPI0000D9EC0F Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 219

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 352 GSLSRRPELRRDNMPWAHPPVALATVRLLSGFGHRAFSIGHP 227
           GS SR PE+R+ ++       ALA VR LS   HR   +  P
Sbjct: 14  GSRSRLPEVRKSSLSQPLEVPALAPVRALSALAHRQLRVDRP 55


>UniRef50_Q6NWB3 Cluster: Splicing factor 3b, subunit 4; n=16;
           Eumetazoa|Rep: Splicing factor 3b, subunit 4 - Danio
           rerio (Zebrafish) (Brachydanio rerio)
          Length = 400

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 813 PXHPPIRGGAPPDRDPPTFGSSRXKEPAVAISRGP 709
           P HP +RG  PP   PP +G+   + P     RGP
Sbjct: 348 PMHPGMRG-PPPPMPPPGYGAGPPRPPPFGFQRGP 381


>UniRef50_Q6A960 Cluster: Phosphoribosyltransferase; n=2;
           Actinomycetales|Rep: Phosphoribosyltransferase -
           Propionibacterium acnes
          Length = 588

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = -2

Query: 442 WRRLLP-LTMVTSRAPRNASQ*GPGWSLAPM--GSLSRRPELRRDNMPWAHPPVALATVR 272
           W R +P +   TS A R A+    GWSL       L    + RRD   + H  V    V 
Sbjct: 14  WDRPIPRIGDTTSSATRAAAP--TGWSLGDQVQQGLDTAIDTRRDIRRYRHDDVPKELVN 71

Query: 271 LLSGFGHRAFSIGH 230
            +   GHRA S+GH
Sbjct: 72  TVLWAGHRAPSVGH 85


>UniRef50_Q3JTX2 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1710b|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1710b)
          Length = 436

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 803 PXLEAARHLIGTPRRLEAAGSKSRPSPSVEGPTSQSERGSSTDHPVRGRG 654
           P   AAR  +G  RR      + R + S  GPT    RG++   P+R RG
Sbjct: 334 PGSRAARRSVGNRRRARTTARRGRSTSSPSGPT--GARGNARCRPLRRRG 381


>UniRef50_A5E0W3 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 715

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = -2

Query: 775 SGPPDVWKQPXQRAGRRHQSRAQLRKVSAEVPPTIQFEAEVPKTGHPD--PDADASDHEV 602
           S  P    Q   RAGR+  S+ Q  +  ++ PP +Q + + P+  HP   P +     + 
Sbjct: 528 SNIPQQNPQVQGRAGRQTPSKQQQARQPSQPPPQLQPQLQ-PQLRHPQSLPPSQQQQQQQ 586

Query: 601 GTQRRRSSRPVKQQG 557
             Q+++  +PV  QG
Sbjct: 587 QQQQQQQQQPVPAQG 601


>UniRef50_A4QYH2 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 526

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 766 PDVWKQPXQRAGRRHQSRAQ-LRKVSAEVPPTIQFEAEVPKTGHPDPDADASDHEVGTQR 590
           P+ +       GR  QSRA+ L +   +  P ++F A  P  G PDP  +  D  +   +
Sbjct: 238 PERYGPRNAHGGRPSQSRAKGLARAVLDTLPIVKFGAPAPTEGKPDPSLEPEDGGLEPGK 297

Query: 589 RRSS 578
           R  S
Sbjct: 298 RNMS 301


>UniRef50_UPI0000F2E9EB Cluster: PREDICTED: similar to winged helix
           domain-containing protein, partial; n=1; Monodelphis
           domestica|Rep: PREDICTED: similar to winged helix
           domain-containing protein, partial - Monodelphis
           domestica
          Length = 911

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -2

Query: 808 PPPX*RRRAT*SGPPDVWKQPXQRAGRRHQSRAQLRKVSAEVPP 677
           PPP  RRRA  SG P  W+Q      R+ + +   R  SA+ PP
Sbjct: 219 PPPKTRRRAGSSGSPLFWRQ----MSRKERPKKDRRTFSAQFPP 258


>UniRef50_Q6WKY8 Cluster: Guanine nucleotide exchange factor; n=2;
           Entamoeba histolytica|Rep: Guanine nucleotide exchange
           factor - Entamoeba histolytica
          Length = 630

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 4   WIFGGKPLRQVSCVERWRYLGVDFEASGCVTLEHS-ISSALNNISRAPLKPQQRL 165
           W+  GK + Q+SCVE+WR L  + + S      HS ++S+++     P+  +Q L
Sbjct: 552 WLERGKSVAQMSCVEKWR-LAQEAKQSMAEAAVHSRVNSSIDMTVSTPVCSKQHL 605


>UniRef50_Q0UG11 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 618

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
 Frame = -2

Query: 676 TIQFEAEVPKTGHPDPDADASDHEVGTQRRRSSRPVKQQGLGFVERHLRSQP--SDPCDD 503
           T +F    P +    PD D+SDH V   RR   R + Q G       L   P  SDP D+
Sbjct: 83  TSEFIRRAPPSLSHRPDQDSSDHHVAPARRPPPRRLLQSGRRGTMHRLFGPPRDSDPPDN 142

Query: 502 ---G*TCGAVSRPTAVSYESY 449
                T    +RP A   E Y
Sbjct: 143 LSRRPTTANPNRPRATPSERY 163


>UniRef50_Q0U7A0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 795

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = -2

Query: 742 QRAGRRHQSRAQLRKVSAEVPPTIQFEAEVPKTGHPDPDADASDHEVGTQRRRSSRPVKQ 563
           Q  G+ H+S A+L +     P   Q +   P       D D    EV   ++RS RP KQ
Sbjct: 593 QDVGKTHESAAELTQPEQHSPLKAQEQEPQPSKKRALGDVDTDPSEVLQDQQRSKRPKKQ 652


>UniRef50_Q3C148 Cluster: DNA repair and recombination protein; n=1;
           Halorubrum sp. TP143|Rep: DNA repair and recombination
           protein - Halorubrum sp. TP143
          Length = 158

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 7/157 (4%)
 Frame = -2

Query: 769 PPDVWKQPXQRAGRRHQSRAQLRKVSAEVPPTIQFEAEVPKTGHPDP-DADASDHEVG-T 596
           PPD  ++P     RR   R  LR++   VPP        P+    DP   D +  + G +
Sbjct: 2   PPDGRQRPALEGERRAGGRLYLRRLRGHVPPGAD-RRHGPRARRRDPRRRDGAPRDRGHS 60

Query: 595 QRRRSSRPVKQQGLGFVERH--LRSQPSDPC-DDG*TCGAVSRPTAVSYES--YQIWRRL 431
           +RRR +    ++ LG   R   ++ QP DP   +G   G  +R   V+      ++  R 
Sbjct: 61  ERRRGAGGPGRRVLGPDPRREGVQLQPPDPARREGEGAGRRTRGDGVADPDRLRRLAHRA 120

Query: 430 LPLTMVTSRAPRNASQ*GPGWSLAPMGSLSRRPELRR 320
           LP  +   R  R A          P    +RRP   R
Sbjct: 121 LPRGVRRPRRARRAP--AEAQQAPPRPDAARRPVQHR 155


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 942,994,898
Number of Sequences: 1657284
Number of extensions: 21326637
Number of successful extensions: 76070
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 69170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75892
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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