Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40035
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 683  LNVQEFQCKKYSRIIYL 633
            L+ QEF C KY  I Y+
Sbjct: 994  LHPQEFNCLKYGVIYYV 1010


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 683  LNVQEFQCKKYSRIIYL 633
            L+ QEF C KY  I Y+
Sbjct: 994  LHPQEFNCLKYGVIYYV 1010


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory
          receptor candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 2  ESRAFCLVLKFHRSPYATLSR 64
          +S  FCLV   HR  Y  LS+
Sbjct: 19 QSEIFCLVNFNHRESYFRLSK 39


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 332 NTKPTLPLMCGNSFSRAGLL 273
           N KP +  +CG S++R   L
Sbjct: 246 NQKPNVCRICGKSYARPSTL 265


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 131  EYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKA 256
            EYPKC+ V  +       +     +R  S     KN ++  A
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAA 2484


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 98  NYFVKIIQLLDEYPKCF 148
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 420 QWGNGTRTSW 391
           Q+GNG  TSW
Sbjct: 274 QFGNGLETSW 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,873
Number of Sequences: 336
Number of extensions: 5328
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)