Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40028
         (904 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.61 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.81 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.5  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   10.0 

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 398 ARRSRKGMLWSPSS 357
           AR SRKG+ WSP++
Sbjct: 99  ARDSRKGLFWSPAA 112


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 152 VIFNLVQISHLTVTVHRYGDLHQFGSAF 69
           ++ N+++ S L+     YGDLH  G  F
Sbjct: 342 ILGNMIESSILSPNRTYYGDLHNMGHVF 369


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 185 NFPVEFWPTRLVIFNLVQISHLTVTVHRYGDLHQFG 78
           N P+  +    V+ N+++ S L+   + YGD H  G
Sbjct: 331 NIPLTEFEGIDVLGNIIESSILSPNRNYYGDFHNMG 366


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 41  NGKRLRSGNRMHSRTDEGHHTDGR*PSGGLFGPN 142
           +G +L++G+ +H    + HH     P    F P+
Sbjct: 76  SGHKLKAGSMVHLHIYDMHHNPQVYPDPEKFDPD 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,112
Number of Sequences: 336
Number of extensions: 4763
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)