Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40024
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.35 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    26   0.35 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 285 YILFLVEVLYLFCIFSEQTSQAKFFRLCNSLFQC 184
           +I+F V +L+L CI+        FF LC   F C
Sbjct: 120 FIIFTVHLLFLLCIY--YFVVPLFFLLCIYYFYC 151



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 285 YILFLVEVLYLFCIF 241
           +I+F V +L+L CI+
Sbjct: 153 FIIFTVHLLFLLCIY 167



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 288 VYILFLVEVLYLFCIF 241
           V++LFL+ + + FC F
Sbjct: 158 VHLLFLLCIYHFFCAF 173



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 285 YILFLVEVLYLFCIF 241
           +ILF V +L L CI+
Sbjct: 245 FILFTVHLLLLVCIY 259



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 285 YILFLVEVLYLFCIF 241
           +I+F + +L+L CI+
Sbjct: 272 FIIFTMHLLFLLCIY 286


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = -3

Query: 163 FPWTLLSCSLVIVLNVLVYFD----SHSTCPFSFFFYS--LVQILHLQF 35
           F WT+L      V  VL+YFD     H + P   FF +  L  +L  +F
Sbjct: 211 FGWTILQTVFFTVPRVLMYFDIFITEHESKPNWLFFLANFLTNLLFWEF 259


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 284  IFCFLLRCFICSASLVNKLLKLNFLGCAIVSFSV 183
            I  F+L CF C +++   + ++   G A++  +V
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQILSTGYALIMMAV 987


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 284  IFCFLLRCFICSASLVNKLLKLNFLGCAIVSFSV 183
            I  F+L CF C +++   + ++   G A++  +V
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQILSTGYALIMMAV 987


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 284  IFCFLLRCFICSASLVNKLLKLNFLGCAIVSFSV 183
            I  F+L CF C +++   + ++   G A++  +V
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQILSTGYALIMMAV 987


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 284  IFCFLLRCFICSASLVNKLLKLNFLGCAIVSFSV 183
            I  F+L CF C +++   + ++   G A++  +V
Sbjct: 954  ILFFMLVCFTCKSNIQLIVAQILSTGYALIMMAV 987


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 559  EETNLQQREENQIFHK 606
            EE NLQ  E  ++ HK
Sbjct: 1384 EEKNLQVNESGKLIHK 1399


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,311
Number of Sequences: 336
Number of extensions: 2636
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)