Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40016
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   1.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   6.3  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 214 WARCGAWWRGAGTWPSSATPXPQRCPPDDAASSGRATSCPTT 339
           WAR  +     G+ P   TP P +  P+ + S+ + T+  +T
Sbjct: 412 WARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVST 453


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 256 PSSATPXPQRCPP 294
           P S  P P RCPP
Sbjct: 23  PHSPEPYPPRCPP 35


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 715 YRTLIRIIWGISKLIV 762
           Y  ++R IW  SKL++
Sbjct: 226 YAVIVRTIWSKSKLLI 241


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 33  YGCNGAHAAAEYWTKSC 83
           YGC GA + AE   K C
Sbjct: 302 YGCAGATSEAEKIAKIC 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,711
Number of Sequences: 336
Number of extensions: 3773
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)