Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40012
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   3.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 650 IVNSFSFHCSPVPNWYYFYQVHLCF 576
           I++S  F C  +   YYFY V + F
Sbjct: 42  ILDSLVFKCYNLRRIYYFYCVSITF 66



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 638 FSFHCSPVPNWYYFYQVHLCF 576
           F+ H   +   YYFY +HL F
Sbjct: 248 FTVHLLLLVCIYYFYYMHLLF 268


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -3

Query: 410 FTN*E-NYVFYLDSSCSTNFHCPMCCFCYKFN 318
           FT  E N VF    +   NF+  M C  YKF+
Sbjct: 448 FTKFEFNTVFNDQRTVFANFYDAMICVAYKFD 479


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -2

Query: 279 GFDHHQIHNHTSQFLTKKSFTTGCSST 199
           G  HH +H +  Q      +  G SST
Sbjct: 125 GHQHHFLHENKYQLEVDSGYHLGASST 151


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -2

Query: 279 GFDHHQIHNHTSQFLTKKSFTTGCSST 199
           G  HH +H +  Q      +  G SST
Sbjct: 125 GHQHHFLHENKYQLEVDSGYHLGASST 151


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -2

Query: 279 GFDHHQIHNHTSQFLTKKSFTTGCSST 199
           G  HH +H +  Q      +  G SST
Sbjct: 125 GHQHHFLHENKYQLEVDSGYHLGASST 151


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 605 YYFYQVHLCFWYSLSI 558
           YY Y  H  +W S ++
Sbjct: 14  YYIYSKHYSYWQSKNV 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,650
Number of Sequences: 336
Number of extensions: 2648
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)